RNA–Protein interactions for RNA: ENST00000344780.4

SNX21-202, Transcript of sorting nexin family member 21, humanhuman

TSL 2

Gene SNX21, Length 3,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-202ENST00000344780 CFDP1Q9UEE9 299 aaPredicted RBP18.43■□□□□ 0.54
SNX21-202ENST00000344780 WASHC2AQ641Q2 1341 aa18.43■□□□□ 0.54
SNX21-202ENST00000344780 SUPT6HQ7KZ85 1726 aaKnown RBP18.42■□□□□ 0.54
SNX21-202ENST00000344780 THOC2Q8NI27 1593 aaKnown RBP18.41■□□□□ 0.54
SNX21-202ENST00000344780 MRC2Q9UBG0 1479 aa18.41■□□□□ 0.54
SNX21-202ENST00000344780 CCDC184Q52MB2 194 aa18.41■□□□□ 0.54
SNX21-202ENST00000344780 IQGAP2Q13576 1575 aa18.4■□□□□ 0.54
SNX21-202ENST00000344780 DEKP35659 375 aaKnown RBP18.4■□□□□ 0.54
SNX21-202ENST00000344780 CDK11AQ9UQ88 783 aaPredicted RBP18.4■□□□□ 0.54
SNX21-202ENST00000344780 EHBP1L1Q8N3D4 1523 aa18.4■□□□□ 0.54
SNX21-202ENST00000344780 C11orf95C9JLR9 678 aaPredicted RBP18.39■□□□□ 0.53
SNX21-202ENST00000344780 KDM6BO15054 1643 aa18.38■□□□□ 0.53
SNX21-202ENST00000344780 PRG4Q92954 1404 aaPredicted RBP18.38■□□□□ 0.53
SNX21-202ENST00000344780 UGGT2Q9NYU1 1516 aa18.37■□□□□ 0.53
SNX21-202ENST00000344780 NBPF8Q3BBV2 869 aa18.37■□□□□ 0.53
SNX21-202ENST00000344780 MRS2Q9HD23 443 aa18.37■□□□□ 0.53
SNX21-202ENST00000344780 JPH4Q96JJ6 628 aa18.36■□□□□ 0.53
SNX21-202ENST00000344780 KDM2AQ9Y2K7 1162 aa18.34■□□□□ 0.53
SNX21-202ENST00000344780 PBRM1Q86U86 1689 aa18.33■□□□□ 0.53
SNX21-202ENST00000344780 PLB1Q6P1J6 1458 aa18.32■□□□□ 0.52
SNX21-202ENST00000344780 HECW1Q76N89 1606 aa18.31■□□□□ 0.52
SNX21-202ENST00000344780 ADAMTS12P58397 1594 aa18.31■□□□□ 0.52
SNX21-202ENST00000344780 PKD2Q13563 968 aa18.29■□□□□ 0.52
SNX21-202ENST00000344780 DENND4BO75064 1496 aaPredicted RBP18.28■□□□□ 0.52
SNX21-202ENST00000344780 PLEKHD1A6NEE1 506 aa18.27■□□□□ 0.52
SNX21-202ENST00000344780 HNRNPMP52272 730 aaKnown RBP eCLIP18.27■□□□□ 0.52
SNX21-202ENST00000344780 IFT140Q96RY7 1462 aa18.27■□□□□ 0.52
SNX21-202ENST00000344780 ABCC5O15440 1437 aa18.26■□□□□ 0.51
SNX21-202ENST00000344780 DAPK1P53355 1430 aa18.26■□□□□ 0.51
SNX21-202ENST00000344780 NUP153P49790 1475 aaKnown RBP18.26■□□□□ 0.51
SNX21-202ENST00000344780 PRKRIP1Q9H875 184 aaPredicted RBP18.26■□□□□ 0.51
SNX21-202ENST00000344780 DISP1Q96F81 1524 aa18.26■□□□□ 0.51
SNX21-202ENST00000344780 WDR62O43379 1518 aa18.25■□□□□ 0.51
SNX21-202ENST00000344780 KIAA0586Q9BVV6 1533 aa18.24■□□□□ 0.51
SNX21-202ENST00000344780 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.24■□□□□ 0.513e-6■■□□□ 11.7
SNX21-202ENST00000344780 GRIN2AQ12879 1464 aa18.24■□□□□ 0.51
SNX21-202ENST00000344780 B4GALNT3Q6L9W6 998 aa18.22■□□□□ 0.51
SNX21-202ENST00000344780 CCDC7Q96M83 1385 aa18.21■□□□□ 0.51
SNX21-202ENST00000344780 ARHGEF11O15085 1522 aa18.21■□□□□ 0.51
SNX21-202ENST00000344780 MIA2Q96PC5 1412 aa18.21■□□□□ 0.5
SNX21-202ENST00000344780 RGL3Q3MIN7 710 aa18.2■□□□□ 0.5
SNX21-202ENST00000344780 TCOF1Q13428 1488 aaKnown RBP18.19■□□□□ 0.5
SNX21-202ENST00000344780 KDM5BQ9UGL1 1544 aa18.19■□□□□ 0.5
SNX21-202ENST00000344780 KIF7Q2M1P5 1343 aa18.19■□□□□ 0.5
SNX21-202ENST00000344780 IL27Q8NEV9 243 aa18.19■□□□□ 0.5
SNX21-202ENST00000344780 TSPY4P0CV99 314 aa18.18■□□□□ 0.5
SNX21-202ENST00000344780 TSPY10P0CW01 314 aa18.18■□□□□ 0.5
SNX21-202ENST00000344780 ANKRD30BQ9BXX2 1392 aa18.18■□□□□ 0.5
SNX21-202ENST00000344780 CNTLNQ9NXG0 1405 aa18.18■□□□□ 0.5
SNX21-202ENST00000344780 EIF5BO60841 1220 aaKnown RBP18.17■□□□□ 0.5
SNX21-202ENST00000344780 KIAA0556O60303 1618 aa18.17■□□□□ 0.5
SNX21-202ENST00000344780 EIF4G3O43432 1585 aaKnown RBP18.16■□□□□ 0.5
SNX21-202ENST00000344780 NUP155O75694 1391 aa18.15■□□□□ 0.5
SNX21-202ENST00000344780 TROQ12816 1431 aaPredicted RBP18.13■□□□□ 0.49
SNX21-202ENST00000344780 DCAF11Q8TEB1 546 aa18.13■□□□□ 0.49
SNX21-202ENST00000344780 CARMIL2Q6F5E8 1435 aa18.12■□□□□ 0.49
SNX21-202ENST00000344780 RAPGEF6Q8TEU7 1601 aa18.12■□□□□ 0.49
SNX21-202ENST00000344780 PPP4R2Q9NY27 417 aa18.12■□□□□ 0.49
SNX21-202ENST00000344780 CAMSAP2Q08AD1 1489 aa18.11■□□□□ 0.49
SNX21-202ENST00000344780 CARD11Q9BXL7 1154 aa18.1■□□□□ 0.49
SNX21-202ENST00000344780 GPATCH8Q9UKJ3 1502 aaKnown RBP18.1■□□□□ 0.49
SNX21-202ENST00000344780 NCOA1Q15788 1441 aa18.09■□□□□ 0.49
SNX21-202ENST00000344780 KIF14Q15058 1648 aa18.09■□□□□ 0.49
SNX21-202ENST00000344780 CEP170Q5SW79 1584 aa18.09■□□□□ 0.49
SNX21-202ENST00000344780 AKNAQ7Z591 1439 aa18.08■□□□□ 0.49
SNX21-202ENST00000344780 ANKRD30AQ9BXX3 1397 aa18.07■□□□□ 0.48
SNX21-202ENST00000344780 RPRD2Q5VT52 1461 aaKnown RBP18.07■□□□□ 0.48
SNX21-202ENST00000344780 TMC1Q8TDI8 760 aa18.07■□□□□ 0.48
SNX21-202ENST00000344780 SYNJ2O15056 1496 aa18.06■□□□□ 0.48
SNX21-202ENST00000344780 GCC2Q8IWJ2 1684 aa18.06■□□□□ 0.48
SNX21-202ENST00000344780 ROCK1Q13464 1354 aa18.05■□□□□ 0.48
SNX21-202ENST00000344780 ANKRD50Q9ULJ7 1429 aa18.05■□□□□ 0.48
SNX21-202ENST00000344780 ZBED9Q6R2W3 1325 aa18.04■□□□□ 0.48
SNX21-202ENST00000344780 USP47Q96K76 1375 aa18.04■□□□□ 0.48
SNX21-202ENST00000344780 ST20-MTHFSA0A0A6YYL1 179 aa18.04■□□□□ 0.48
SNX21-202ENST00000344780 MYT1LQ9UL68 1186 aa18.03■□□□□ 0.48
SNX21-202ENST00000344780 PTPRGP23470 1445 aa18.02■□□□□ 0.48
SNX21-202ENST00000344780 PZPP20742 1482 aa18.02■□□□□ 0.47
SNX21-202ENST00000344780 ATP10BO94823 1461 aa18.01■□□□□ 0.47
SNX21-202ENST00000344780 DNMT1P26358 1616 aaKnown RBP18.01■□□□□ 0.47
SNX21-202ENST00000344780 MAGI1Q96QZ7 1491 aaPredicted RBP18■□□□□ 0.47
SNX21-202ENST00000344780 PAK3O75914 559 aaPredicted RBP17.99■□□□□ 0.47
SNX21-202ENST00000344780 TEX14Q8IWB6 1497 aa17.99■□□□□ 0.47
SNX21-202ENST00000344780 KIAA1107Q9UPP5 1409 aa17.98■□□□□ 0.47
SNX21-202ENST00000344780 KIF15Q9NS87 1388 aa17.98■□□□□ 0.47
SNX21-202ENST00000344780 C9orf84Q5VXU9 1444 aa17.98■□□□□ 0.47
SNX21-202ENST00000344780 NBPF1Q3BBV0 1214 aa17.96■□□□□ 0.47
SNX21-202ENST00000344780 SPATA31E1Q6ZUB1 1445 aa17.94■□□□□ 0.46
SNX21-202ENST00000344780 ERICH6BQ5W0A0 696 aa17.92■□□□□ 0.46
SNX21-202ENST00000344780 NUDCQ9Y266 331 aa17.92■□□□□ 0.46
SNX21-202ENST00000344780 NUP160Q12769 1436 aa17.91■□□□□ 0.46
SNX21-202ENST00000344780 CC2D1BQ5T0F9 858 aaKnown RBP17.9■□□□□ 0.46
SNX21-202ENST00000344780 ROCK2O75116 1388 aaKnown RBP17.89■□□□□ 0.45
SNX21-202ENST00000344780 FANCIQ9NVI1 1328 aa17.89■□□□□ 0.45
SNX21-202ENST00000344780 RTL5Q5HYW3 569 aaPredicted RBP17.89■□□□□ 0.45
SNX21-202ENST00000344780 DHX29Q7Z478 1369 aaKnown RBP17.88■□□□□ 0.45
SNX21-202ENST00000344780 SENP3Q9H4L4 574 aaPredicted RBP17.87■□□□□ 0.45
SNX21-202ENST00000344780 PNISRQ8TF01 805 aaKnown RBP17.87■□□□□ 0.45
SNX21-202ENST00000344780 AFAP1Q8N556 730 aa17.83■□□□□ 0.45
SNX21-202ENST00000344780 NPM2Q86SE8 214 aaKnown RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms