RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 FER1L4A9Z1Z3 1794 aa29.72■■■□□ 2.35
CDHR4-201ENST00000343366 HECW1Q76N89 1606 aa29.72■■■□□ 2.35
CDHR4-201ENST00000343366 HSPA2P54652 639 aa29.72■■■□□ 2.35
CDHR4-201ENST00000343366 POGZQ7Z3K3 1410 aa29.71■■■□□ 2.35
CDHR4-201ENST00000343366 PLEKHD1A6NEE1 506 aa29.71■■■□□ 2.35
CDHR4-201ENST00000343366 CASKIN1Q8WXD9 1431 aa29.68■■■□□ 2.34
CDHR4-201ENST00000343366 ARHGEF12Q9NZN5 1544 aa29.66■■■□□ 2.34
CDHR4-201ENST00000343366 FYCO1Q9BQS8 1478 aa29.66■■■□□ 2.34
CDHR4-201ENST00000343366 CDK13Q14004 1512 aaKnown RBP29.62■■■□□ 2.33
CDHR4-201ENST00000343366 PLCH2O75038 1416 aa29.62■■■□□ 2.33
CDHR4-201ENST00000343366 VPS8Q8N3P4 1428 aa29.62■■■□□ 2.33
CDHR4-201ENST00000343366 PREX1Q8TCU6 1659 aa29.6■■■□□ 2.33
CDHR4-201ENST00000343366 CERKQ8TCT0 537 aa29.59■■■□□ 2.33
CDHR4-201ENST00000343366 CCDC18Q5T9S5 1454 aa29.58■■■□□ 2.33
CDHR4-201ENST00000343366 SCAPERQ9BY12 1400 aa29.57■■■□□ 2.32
CDHR4-201ENST00000343366 ATP1B4Q9UN42 357 aaPredicted RBP29.56■■■□□ 2.32
CDHR4-201ENST00000343366 ATP10AO60312 1499 aa29.55■■■□□ 2.32
CDHR4-201ENST00000343366 STRCQ7RTU9 1775 aa29.54■■■□□ 2.32
CDHR4-201ENST00000343366 MYO5CQ9NQX4 1742 aa29.53■■■□□ 2.32
CDHR4-201ENST00000343366 C9orf84Q5VXU9 1444 aa29.53■■■□□ 2.32
CDHR4-201ENST00000343366 CDK11AQ9UQ88 783 aaPredicted RBP29.52■■■□□ 2.32
CDHR4-201ENST00000343366 KDM5CP41229 1560 aa29.49■■■□□ 2.31
CDHR4-201ENST00000343366 MLECQ14165 292 aa29.48■■■□□ 2.31
CDHR4-201ENST00000343366 PLPPR3Q6T4P5 718 aa29.48■■■□□ 2.31
CDHR4-201ENST00000343366 SETD1BQ9UPS6 1966 aaKnown RBP29.45■■■□□ 2.31
CDHR4-201ENST00000343366 LRRIQ1Q96JM4 1722 aa29.45■■■□□ 2.3
CDHR4-201ENST00000343366 KIF14Q15058 1648 aa29.45■■■□□ 2.3
CDHR4-201ENST00000343366 REREQ9P2R6 1566 aa29.43■■■□□ 2.3
CDHR4-201ENST00000343366 ZNF518AQ6AHZ1 1483 aa29.41■■■□□ 2.3
CDHR4-201ENST00000343366 MAP3K1Q13233 1512 aa29.4■■■□□ 2.3
CDHR4-201ENST00000343366 DIP2CQ9Y2E4 1556 aa29.39■■■□□ 2.3
CDHR4-201ENST00000343366 CEBPAP49715 358 aaPredicted RBP29.37■■■□□ 2.29
CDHR4-201ENST00000343366 APLP2Q06481 763 aa29.37■■■□□ 2.29
CDHR4-201ENST00000343366 EFCAB2Q5VUJ9 269 aa29.37■■■□□ 2.29
CDHR4-201ENST00000343366 C3P01024 1663 aa29.34■■■□□ 2.29
CDHR4-201ENST00000343366 ABCA6Q8N139 1617 aa29.34■■■□□ 2.29
CDHR4-201ENST00000343366 CDC42BPBQ9Y5S2 1711 aa29.34■■■□□ 2.29
CDHR4-201ENST00000343366 TROQ12816 1431 aaPredicted RBP29.32■■■□□ 2.28
CDHR4-201ENST00000343366 UHRF1BP1Q6BDS2 1440 aa29.32■■■□□ 2.28
CDHR4-201ENST00000343366 TIAM1Q13009 1591 aa29.31■■■□□ 2.28
CDHR4-201ENST00000343366 AGLP35573 1532 aa29.3■■■□□ 2.28
CDHR4-201ENST00000343366 MLH3Q9UHC1 1453 aa29.29■■■□□ 2.28
CDHR4-201ENST00000343366 ILDR2Q71H61 639 aa29.29■■■□□ 2.28
CDHR4-201ENST00000343366 ARHGAP5Q13017 1502 aa29.29■■■□□ 2.28
CDHR4-201ENST00000343366 PTPRTO14522 1441 aa29.28■■■□□ 2.28
CDHR4-201ENST00000343366 AFAP1Q8N556 730 aa29.28■■■□□ 2.28
CDHR4-201ENST00000343366 DMRT2Q9Y5R5 561 aa29.28■■■□□ 2.28
CDHR4-201ENST00000343366 LTBP4Q8N2S1 1624 aa29.26■■■□□ 2.27
CDHR4-201ENST00000343366 MTUS2Q5JR59 1369 aa29.26■■■□□ 2.27
CDHR4-201ENST00000343366 EHBP1L1Q8N3D4 1523 aa29.24■■■□□ 2.27
CDHR4-201ENST00000343366 PREX2Q70Z35 1606 aa29.23■■■□□ 2.27
CDHR4-201ENST00000343366 ABCC1P33527 1531 aa29.23■■■□□ 2.27
CDHR4-201ENST00000343366 ITSN2Q9NZM3 1697 aa29.21■■■□□ 2.27
CDHR4-201ENST00000343366 KIDINS220Q9ULH0 1771 aa29.21■■■□□ 2.27
CDHR4-201ENST00000343366 DISP3Q9P2K9 1392 aa29.2■■■□□ 2.26
CDHR4-201ENST00000343366 TRAPPC8Q9Y2L5 1435 aa29.19■■■□□ 2.26
CDHR4-201ENST00000343366 LRRC9Q6ZRR7 1453 aa29.17■■■□□ 2.26
CDHR4-201ENST00000343366 SOCS7O14512 581 aa29.17■■■□□ 2.26
CDHR4-201ENST00000343366 IQSEC2Q5JU85 1478 aa29.17■■■□□ 2.26
CDHR4-201ENST00000343366 SPATA31D1Q6ZQQ2 1576 aa29.15■■■□□ 2.26
CDHR4-201ENST00000343366 NCOA1Q15788 1441 aa29.15■■■□□ 2.26
CDHR4-201ENST00000343366 SUPT6HQ7KZ85 1726 aaKnown RBP29.13■■■□□ 2.25
CDHR4-201ENST00000343366 MROH2AA6NES4 1674 aa29.12■■■□□ 2.25
CDHR4-201ENST00000343366 CDC42BPAQ5VT25 1732 aa29.12■■■□□ 2.25
CDHR4-201ENST00000343366 CNTLNQ9NXG0 1405 aa29.09■■■□□ 2.25
CDHR4-201ENST00000343366 NPATQ14207 1427 aa29.05■■■□□ 2.24
CDHR4-201ENST00000343366 SAMD9LQ8IVG5 1584 aa29.05■■■□□ 2.24
CDHR4-201ENST00000343366 KANK4Q5T7N3 995 aaPredicted RBP29.03■■■□□ 2.24
CDHR4-201ENST00000343366 CAMSAP1Q5T5Y3 1602 aa29.02■■■□□ 2.24
CDHR4-201ENST00000343366 ZNF142P52746 1687 aaPredicted RBP29■■■□□ 2.23
CDHR4-201ENST00000343366 CCNB3Q8WWL7 1395 aa29■■■□□ 2.23
CDHR4-201ENST00000343366 NCOA2Q15596 1464 aa28.99■■■□□ 2.23
CDHR4-201ENST00000343366 PLXNC1O60486 1568 aa28.98■■■□□ 2.23
CDHR4-201ENST00000343366 MYT1LQ9UL68 1186 aa28.98■■■□□ 2.23
CDHR4-201ENST00000343366 MYO3AQ8NEV4 1616 aa28.94■■■□□ 2.22
CDHR4-201ENST00000343366 ZMYM3Q14202 1370 aa28.93■■■□□ 2.22
CDHR4-201ENST00000343366 ESF1Q9H501 851 aaKnown RBP28.93■■■□□ 2.22
CDHR4-201ENST00000343366 SYCP2Q9BX26 1530 aa28.93■■■□□ 2.22
CDHR4-201ENST00000343366 GPATCH8Q9UKJ3 1502 aaKnown RBP28.93■■■□□ 2.22
CDHR4-201ENST00000343366 INO80Q9ULG1 1556 aaPredicted RBP28.92■■■□□ 2.22
CDHR4-201ENST00000343366 PLA2R1Q13018 1463 aa28.91■■■□□ 2.22
CDHR4-201ENST00000343366 CLTCQ00610 1675 aaKnown RBP28.91■■■□□ 2.22
CDHR4-201ENST00000343366 TCOF1Q13428 1488 aaKnown RBP28.9■■■□□ 2.22
CDHR4-201ENST00000343366 ATP7AQ04656 1500 aa28.88■■■□□ 2.21
CDHR4-201ENST00000343366 CFDP1Q9UEE9 299 aaPredicted RBP28.87■■■□□ 2.21
CDHR4-201ENST00000343366 PTPRKQ15262 1439 aa28.86■■■□□ 2.21
CDHR4-201ENST00000343366 CEP170BQ9Y4F5 1589 aaPredicted RBP28.86■■■□□ 2.21
CDHR4-201ENST00000343366 MYOM3Q5VTT5 1437 aa28.85■■■□□ 2.21
CDHR4-201ENST00000343366 MIA2Q96PC5 1412 aa28.85■■■□□ 2.21
CDHR4-201ENST00000343366 KIAA1107Q9UPP5 1409 aa28.85■■■□□ 2.21
CDHR4-201ENST00000343366 ZNF335Q9H4Z2 1342 aaPredicted RBP28.84■■■□□ 2.21
CDHR4-201ENST00000343366 NCKAP5LQ9HCH0 1330 aa28.83■■■□□ 2.21
CDHR4-201ENST00000343366 PLEKHH2Q8IVE3 1493 aa28.83■■■□□ 2.21
CDHR4-201ENST00000343366 A2MP01023 1474 aa28.8■■■□□ 2.2
CDHR4-201ENST00000343366 SPAG9O60271 1321 aaKnown RBP28.8■■■□□ 2.2
CDHR4-201ENST00000343366 PKD2Q13563 968 aa28.77■■■□□ 2.2
CDHR4-201ENST00000343366 HNRNPMP52272 730 aaKnown RBP eCLIP28.76■■■□□ 2.19
CDHR4-201ENST00000343366 ADGBQ8N7X0 1667 aa28.76■■■□□ 2.19
CDHR4-201ENST00000343366 ZNF777Q9ULD5 760 aaPredicted RBP28.73■■■□□ 2.19
CDHR4-201ENST00000343366 DNMT1P26358 1616 aaKnown RBP28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms