RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 GBP4Q96PP9 640 aa15.4■□□□□ 0.06
SEMA6A-202ENST00000343348 MFAP1P55081 439 aaKnown RBP15.4■□□□□ 0.06
SEMA6A-202ENST00000343348 TMF1P82094 1093 aa15.39■□□□□ 0.05
SEMA6A-202ENST00000343348 NOL8Q76FK4 1167 aaKnown RBP15.39■□□□□ 0.05
SEMA6A-202ENST00000343348 SRPK2P78362 688 aaKnown RBP15.39■□□□□ 0.05
SEMA6A-202ENST00000343348 MORC1Q86VD1 984 aa15.39■□□□□ 0.05
SEMA6A-202ENST00000343348 KIAA1211Q6ZU35 1233 aa15.38■□□□□ 0.05
SEMA6A-202ENST00000343348 ANO8Q9HCE9 1232 aaPredicted RBP15.38■□□□□ 0.05
SEMA6A-202ENST00000343348 ITPRIPQ8IWB1 547 aa15.38■□□□□ 0.05
SEMA6A-202ENST00000343348 HSP90B1P14625 803 aaKnown RBP15.37■□□□□ 0.05
SEMA6A-202ENST00000343348 FOXD4L5Q5VV16 416 aaPredicted RBP15.37■□□□□ 0.05
SEMA6A-202ENST00000343348 FOXD4L4Q8WXT5 416 aaPredicted RBP15.37■□□□□ 0.05
SEMA6A-202ENST00000343348 CREBRFQ8IUR6 639 aa15.36■□□□□ 0.05
SEMA6A-202ENST00000343348 GOLGA6L3A6NEY3 463 aa15.36■□□□□ 0.05
SEMA6A-202ENST00000343348 FOXD1Q16676 465 aa15.35■□□□□ 0.05
SEMA6A-202ENST00000343348 HSPA5P11021 654 aaKnown RBP15.35■□□□□ 0.05
SEMA6A-202ENST00000343348 RCAN3Q9UKA8 241 aa15.35■□□□□ 0.05
SEMA6A-202ENST00000343348 TSHZ2Q9NRE2 1034 aa15.34■□□□□ 0.05
SEMA6A-202ENST00000343348 ZNF330Q9Y3S2 320 aaPredicted RBP15.34■□□□□ 0.05
SEMA6A-202ENST00000343348 RTF1Q92541 710 aaKnown RBP15.34■□□□□ 0.05
SEMA6A-202ENST00000343348 STK26Q9P289 416 aa15.34■□□□□ 0.05
SEMA6A-202ENST00000343348 A0A0U1RQG5 324 aaPredicted RBP15.31■□□□□ 0.04
SEMA6A-202ENST00000343348 TRIM6-TRIM34B2RNG4 842 aa15.31■□□□□ 0.04
SEMA6A-202ENST00000343348 MLECQ14165 292 aa15.3■□□□□ 0.04
SEMA6A-202ENST00000343348 PRM3Q9NNZ6 103 aa15.3■□□□□ 0.04
SEMA6A-202ENST00000343348 IPO9Q96P70 1041 aaKnown RBP15.28■□□□□ 0.04
SEMA6A-202ENST00000343348 SYAP1Q96A49 352 aaPredicted RBP15.27■□□□□ 0.04
SEMA6A-202ENST00000343348 CCER2I3L3R5 266 aa15.27■□□□□ 0.04
SEMA6A-202ENST00000343348 TRHP20396 242 aaPredicted RBP15.27■□□□□ 0.04
SEMA6A-202ENST00000343348 SLC4A3P48751 1232 aa15.27■□□□□ 0.04
SEMA6A-202ENST00000343348 CCDC146Q8IYE0 955 aa15.27■□□□□ 0.04
SEMA6A-202ENST00000343348 CLUAP1Q96AJ1 413 aa15.27■□□□□ 0.04
SEMA6A-202ENST00000343348 RWDD1Q9H446 243 aaPredicted RBP15.27■□□□□ 0.04
SEMA6A-202ENST00000343348 PTMSP20962 102 aa15.27■□□□□ 0.03
SEMA6A-202ENST00000343348 CALD1Q05682 793 aaKnown RBP15.27■□□□□ 0.03
SEMA6A-202ENST00000343348 U2AF1L5P0DN76 240 aaPredicted RBP15.27■□□□□ 0.03
SEMA6A-202ENST00000343348 U2AF1Q01081 240 aaKnown RBP eCLIP15.27■□□□□ 0.03
SEMA6A-202ENST00000343348 FOXD4L6Q3SYB3 417 aaPredicted RBP15.27■□□□□ 0.03
SEMA6A-202ENST00000343348 FOXD4L3Q6VB84 417 aaPredicted RBP15.27■□□□□ 0.03
SEMA6A-202ENST00000343348 CHMP3Q9Y3E7 222 aa15.27■□□□□ 0.03
SEMA6A-202ENST00000343348 TCERG1O14776 1098 aaKnown RBP15.26■□□□□ 0.03
SEMA6A-202ENST00000343348 IPO8O15397 1037 aaKnown RBP15.26■□□□□ 0.03
SEMA6A-202ENST00000343348 GOLGA6L1Q8N7Z2 621 aa15.26■□□□□ 0.03
SEMA6A-202ENST00000343348 PAK3O75914 559 aaPredicted RBP15.26■□□□□ 0.03
SEMA6A-202ENST00000343348 KTN1Q86UP2 1357 aaKnown RBP15.26■□□□□ 0.03
SEMA6A-202ENST00000343348 TPM4P67936 248 aa15.25■□□□□ 0.03
SEMA6A-202ENST00000343348 HSP90AA2PQ14568 343 aaPredicted RBP15.24■□□□□ 0.03
SEMA6A-202ENST00000343348 CFAP44Q96MT7 982 aa15.24■□□□□ 0.03
SEMA6A-202ENST00000343348 SLC4A10Q6U841 1118 aa15.23■□□□□ 0.03
SEMA6A-202ENST00000343348 SMC4Q9NTJ3 1288 aa15.22■□□□□ 0.03
SEMA6A-202ENST00000343348 CCNB3Q8WWL7 1395 aa15.22■□□□□ 0.03
SEMA6A-202ENST00000343348 HTATSF1O43719 755 aaKnown RBP15.21■□□□□ 0.03
SEMA6A-202ENST00000343348 GORABQ5T7V8 394 aa15.21■□□□□ 0.02
SEMA6A-202ENST00000343348 RASSF8Q8NHQ8 419 aa15.21■□□□□ 0.02
SEMA6A-202ENST00000343348 VSIG10Q8N0Z9 540 aa15.2■□□□□ 0.02
SEMA6A-202ENST00000343348 PMFBP1Q8TBY8 1022 aa15.2■□□□□ 0.02
SEMA6A-202ENST00000343348 CCDC9Q9Y3X0 531 aaKnown RBP15.19■□□□□ 0.02
SEMA6A-202ENST00000343348 CCAR2Q8N163 923 aaKnown RBP15.19■□□□□ 0.02
SEMA6A-202ENST00000343348 PATL2C9JE40 543 aaKnown RBP15.18■□□□□ 0.02
SEMA6A-202ENST00000343348 PES1O00541 588 aaKnown RBP15.18■□□□□ 0.02
SEMA6A-202ENST00000343348 TNIKQ9UKE5 1360 aa15.18■□□□□ 0.02
SEMA6A-202ENST00000343348 TIMELESSQ9UNS1 1208 aa15.18■□□□□ 0.02
SEMA6A-202ENST00000343348 EIF4G1Q04637 1599 aaKnown RBP15.17■□□□□ 0.02
SEMA6A-202ENST00000343348 ROCK2O75116 1388 aaKnown RBP15.17■□□□□ 0.02
SEMA6A-202ENST00000343348 HDGFL2Q7Z4V5 671 aaPredicted RBP15.16■□□□□ 0.02
SEMA6A-202ENST00000343348 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.16■□□□□ 0.02
SEMA6A-202ENST00000343348 CEP164Q9UPV0 1460 aa15.16■□□□□ 0.02
SEMA6A-202ENST00000343348 TAF7LQ5H9L4 462 aa15.16■□□□□ 0.02
SEMA6A-202ENST00000343348 PKD2Q13563 968 aa15.15■□□□□ 0.02
SEMA6A-202ENST00000343348 WRNQ14191 1432 aaPredicted RBP eCLIP15.15■□□□□ 0.02
SEMA6A-202ENST00000343348 CSB-PGBD3P0DP91 1061 aa15.15■□□□□ 0.02
SEMA6A-202ENST00000343348 FBXO3Q9UK99 471 aa15.15■□□□□ 0.02
SEMA6A-202ENST00000343348 KANK1Q14678 1352 aa15.14■□□□□ 0.01
SEMA6A-202ENST00000343348 GGT6Q6P531 493 aa15.14■□□□□ 0.01
SEMA6A-202ENST00000343348 GPATCH3Q96I76 525 aa15.14■□□□□ 0.01
SEMA6A-202ENST00000343348 PLIN1O60240 522 aa15.14■□□□□ 0.01
SEMA6A-202ENST00000343348 TOMM22Q9NS69 142 aa15.14■□□□□ 0.01
SEMA6A-202ENST00000343348 BCL11BQ9C0K0 894 aaPredicted RBP15.13■□□□□ 0.01
SEMA6A-202ENST00000343348 EEA1Q15075 1411 aa15.13■□□□□ 0.01
SEMA6A-202ENST00000343348 WWC1Q8IX03 1113 aa15.13■□□□□ 0.01
SEMA6A-202ENST00000343348 KIF27Q86VH2 1401 aa15.13■□□□□ 0.01
SEMA6A-202ENST00000343348 ZNF592Q92610 1267 aa15.13■□□□□ 0.01
SEMA6A-202ENST00000343348 CSPP1Q1MSJ5 1256 aa15.13■□□□□ 0.01
SEMA6A-202ENST00000343348 SETD5Q9C0A6 1442 aa15.12■□□□□ 0.01
SEMA6A-202ENST00000343348 SF3A1Q15459 793 aaKnown RBP15.12■□□□□ 0.01
SEMA6A-202ENST00000343348 BAZ1BQ9UIG0 1483 aaKnown RBP15.12■□□□□ 0.01
SEMA6A-202ENST00000343348 RRP7AQ9Y3A4 280 aaKnown RBP15.12■□□□□ 0.01
SEMA6A-202ENST00000343348 TPM3P06753 285 aa15.12■□□□□ 0.01
SEMA6A-202ENST00000343348 VPS53Q5VIR6 699 aa15.12■□□□□ 0.01
SEMA6A-202ENST00000343348 STK31Q9BXU1 1019 aa15.11■□□□□ 0.01
SEMA6A-202ENST00000343348 RILPL2Q969X0 211 aa15.11■□□□□ 0.01
SEMA6A-202ENST00000343348 NUTM2DQ5VT03 806 aaPredicted RBP15.11■□□□□ 0.01
SEMA6A-202ENST00000343348 PHF14O94880 888 aa15.11■□□□□ 0.01
SEMA6A-202ENST00000343348 ZNF771Q7L3S4 317 aaPredicted RBP15.11■□□□□ 0.01
SEMA6A-202ENST00000343348 KIF16BQ96L93 1317 aa15.11■□□□□ 0.01
SEMA6A-202ENST00000343348 BCL2L13Q9BXK5 485 aa15.1■□□□□ 0.01
SEMA6A-202ENST00000343348 DDX49Q9Y6V7 483 aaKnown RBP15.1■□□□□ 0.01
SEMA6A-202ENST00000343348 ST18O60284 1047 aa15.1■□□□□ 0.01
SEMA6A-202ENST00000343348 RALBP1Q15311 655 aa15.09■□□□□ 0.01
SEMA6A-202ENST00000343348 TPD52L1Q16890 204 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms