RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 DAPK1P53355 1430 aa33.34■■■□□ 2.93
NELFB-201ENST00000343053 RBM19Q9Y4C8 960 aaKnown RBP33.33■■■□□ 2.93
NELFB-201ENST00000343053 FAM9BQ8IZU0 186 aa33.32■■■□□ 2.92
NELFB-201ENST00000343053 SLC4A1APQ9BWU0 796 aaKnown RBP33.32■■■□□ 2.92
NELFB-201ENST00000343053 CNTLNQ9NXG0 1405 aa33.3■■■□□ 2.92
NELFB-201ENST00000343053 ANP32EQ9BTT0 268 aa33.29■■■□□ 2.92
NELFB-201ENST00000343053 ABCC5O15440 1437 aa33.29■■■□□ 2.92
NELFB-201ENST00000343053 MRC2Q9UBG0 1479 aa33.28■■■□□ 2.92
NELFB-201ENST00000343053 CCDC7Q96M83 1385 aa33.25■■■□□ 2.91
NELFB-201ENST00000343053 ZNF777Q9ULD5 760 aaPredicted RBP33.25■■■□□ 2.91
NELFB-201ENST00000343053 ANKRD30BQ9BXX2 1392 aa33.25■■■□□ 2.91
NELFB-201ENST00000343053 NUP153P49790 1475 aaKnown RBP33.25■■■□□ 2.91
NELFB-201ENST00000343053 DISP1Q96F81 1524 aa33.24■■■□□ 2.91
NELFB-201ENST00000343053 KIAA0556O60303 1618 aa33.23■■■□□ 2.91
NELFB-201ENST00000343053 ZNF326Q5BKZ1 582 aaKnown RBP33.22■■■□□ 2.91
NELFB-201ENST00000343053 POLR3GLQ9BT43 218 aa33.21■■■□□ 2.91
NELFB-201ENST00000343053 MRS2Q9HD23 443 aa33.21■■■□□ 2.91
NELFB-201ENST00000343053 RPRD2Q5VT52 1461 aaKnown RBP33.2■■■□□ 2.91
NELFB-201ENST00000343053 PRKRIP1Q9H875 184 aaPredicted RBP33.2■■■□□ 2.91
NELFB-201ENST00000343053 DNMT1P26358 1616 aaKnown RBP33.2■■■□□ 2.91
NELFB-201ENST00000343053 NCOA1Q15788 1441 aa33.2■■■□□ 2.9
NELFB-201ENST00000343053 PRG4Q92954 1404 aaPredicted RBP33.18■■■□□ 2.9
NELFB-201ENST00000343053 TEX14Q8IWB6 1497 aa33.18■■■□□ 2.9
NELFB-201ENST00000343053 KIF7Q2M1P5 1343 aa33.15■■■□□ 2.9
NELFB-201ENST00000343053 RAPGEF6Q8TEU7 1601 aa33.15■■■□□ 2.9
NELFB-201ENST00000343053 FBLN2P98095 1184 aa33.14■■■□□ 2.9
NELFB-201ENST00000343053 ROCK1Q13464 1354 aa33.14■■■□□ 2.9
NELFB-201ENST00000343053 KIAA0586Q9BVV6 1533 aa33.13■■■□□ 2.89
NELFB-201ENST00000343053 CFDP1Q9UEE9 299 aaPredicted RBP33.12■■■□□ 2.89
NELFB-201ENST00000343053 SENP3-EIF4A1A0A087X0R7 540 aa33.11■■■□□ 2.89
NELFB-201ENST00000343053 CDK11AQ9UQ88 783 aaPredicted RBP33.1■■■□□ 2.89
NELFB-201ENST00000343053 PLB1Q6P1J6 1458 aa33.08■■■□□ 2.89
NELFB-201ENST00000343053 IFT140Q96RY7 1462 aa33.08■■■□□ 2.89
NELFB-201ENST00000343053 GRIN2AQ12879 1464 aa33.07■■■□□ 2.88
NELFB-201ENST00000343053 CAMSAP2Q08AD1 1489 aa33.06■■■□□ 2.88
NELFB-201ENST00000343053 PZPP20742 1482 aa33.04■■■□□ 2.88
NELFB-201ENST00000343053 EIF4G3O43432 1585 aaKnown RBP33.03■■■□□ 2.88
NELFB-201ENST00000343053 KIF14Q15058 1648 aa33.02■■■□□ 2.88
NELFB-201ENST00000343053 SPATA31E1Q6ZUB1 1445 aa33■■■□□ 2.87
NELFB-201ENST00000343053 CHMP7Q8WUX9 453 aaPredicted RBP32.99■■■□□ 2.87
NELFB-201ENST00000343053 TROQ12816 1431 aaPredicted RBP32.99■■■□□ 2.87
NELFB-201ENST00000343053 PKD2Q13563 968 aa32.98■■■□□ 2.87
NELFB-201ENST00000343053 GPATCH8Q9UKJ3 1502 aaKnown RBP32.94■■■□□ 2.86
NELFB-201ENST00000343053 B4GALNT3Q6L9W6 998 aa32.94■■■□□ 2.86
NELFB-201ENST00000343053 MSH5O43196 834 aa32.92■■■□□ 2.86
NELFB-201ENST00000343053 ZBED9Q6R2W3 1325 aa32.9■■■□□ 2.86
NELFB-201ENST00000343053 USP47Q96K76 1375 aa32.9■■■□□ 2.86
NELFB-201ENST00000343053 CEP170Q5SW79 1584 aa32.89■■■□□ 2.86
NELFB-201ENST00000343053 BCORL1Q5H9F3 1711 aa32.87■■■□□ 2.85
NELFB-201ENST00000343053 POLR1AO95602 1720 aaPredicted RBP32.87■■■□□ 2.85
NELFB-201ENST00000343053 KIAA1107Q9UPP5 1409 aa32.87■■■□□ 2.85
NELFB-201ENST00000343053 ADGBQ8N7X0 1667 aa32.87■■■□□ 2.85
NELFB-201ENST00000343053 ITSN2Q9NZM3 1697 aa32.87■■■□□ 2.85
NELFB-201ENST00000343053 PPP4R2Q9NY27 417 aa32.85■■■□□ 2.85
NELFB-201ENST00000343053 KDM2AQ9Y2K7 1162 aa32.83■■■□□ 2.85
NELFB-201ENST00000343053 ERCC6Q03468 1493 aa32.81■■■□□ 2.84
NELFB-201ENST00000343053 ANKRD30AQ9BXX3 1397 aa32.81■■■□□ 2.84
NELFB-201ENST00000343053 MBD5Q9P267 1494 aa32.8■■■□□ 2.84
NELFB-201ENST00000343053 DHX29Q7Z478 1369 aaKnown RBP32.8■■■□□ 2.84
NELFB-201ENST00000343053 ANKRD50Q9ULJ7 1429 aa32.8■■■□□ 2.84
NELFB-201ENST00000343053 JPH4Q96JJ6 628 aa32.79■■■□□ 2.84
NELFB-201ENST00000343053 CROCC2H7BZ55 1655 aa32.79■■■□□ 2.84
NELFB-201ENST00000343053 NUP155O75694 1391 aa32.78■■■□□ 2.84
NELFB-201ENST00000343053 ADGRL2O95490 1459 aa32.73■■■□□ 2.83
NELFB-201ENST00000343053 SYNJ2O15056 1496 aa32.72■■■□□ 2.83
NELFB-201ENST00000343053 PLEKHD1A6NEE1 506 aa32.72■■■□□ 2.83
NELFB-201ENST00000343053 CARD11Q9BXL7 1154 aa32.72■■■□□ 2.83
NELFB-201ENST00000343053 MAGI1Q96QZ7 1491 aaPredicted RBP32.71■■■□□ 2.83
NELFB-201ENST00000343053 ADCY10Q96PN6 1610 aa32.7■■■□□ 2.83
NELFB-201ENST00000343053 HNRNPMP52272 730 aaKnown RBP eCLIP32.7■■■□□ 2.833e-8■■■■□ 22.5
NELFB-201ENST00000343053 CARMIL2Q6F5E8 1435 aa32.7■■■□□ 2.83
NELFB-201ENST00000343053 KDM5CP41229 1560 aa32.7■■■□□ 2.82
NELFB-201ENST00000343053 CDC42BPAQ5VT25 1732 aa32.69■■■□□ 2.82
NELFB-201ENST00000343053 C9orf84Q5VXU9 1444 aa32.68■■■□□ 2.82
NELFB-201ENST00000343053 ERICH6BQ5W0A0 696 aa32.65■■■□□ 2.82
NELFB-201ENST00000343053 DCAF11Q8TEB1 546 aa32.64■■■□□ 2.82
NELFB-201ENST00000343053 ST20-MTHFSA0A0A6YYL1 179 aa32.63■■■□□ 2.81
NELFB-201ENST00000343053 TSPY4P0CV99 314 aa32.62■■■□□ 2.81
NELFB-201ENST00000343053 TSPY10P0CW01 314 aa32.62■■■□□ 2.81
NELFB-201ENST00000343053 FANCIQ9NVI1 1328 aa32.61■■■□□ 2.81
NELFB-201ENST00000343053 TMC1Q8TDI8 760 aa32.61■■■□□ 2.81
NELFB-201ENST00000343053 ATP10BO94823 1461 aa32.6■■■□□ 2.81
NELFB-201ENST00000343053 ERICH6Q7L0X2 663 aa32.6■■■□□ 2.81
NELFB-201ENST00000343053 KIF15Q9NS87 1388 aa32.58■■■□□ 2.81
NELFB-201ENST00000343053 ABCC10Q5T3U5 1492 aa32.57■■■□□ 2.8
NELFB-201ENST00000343053 NUDCQ9Y266 331 aa32.56■■■□□ 2.8
NELFB-201ENST00000343053 RALGAPBQ86X10 1494 aa32.56■■■□□ 2.8
NELFB-201ENST00000343053 NUP160Q12769 1436 aa32.55■■■□□ 2.8
NELFB-201ENST00000343053 SMG6Q86US8 1419 aaKnown RBP32.54■■■□□ 2.8
NELFB-201ENST00000343053 BCL11AQ9H165 835 aa32.54■■■□□ 2.8
NELFB-201ENST00000343053 SALL2Q9Y467 1007 aaPredicted RBP32.54■■■□□ 2.8
NELFB-201ENST00000343053 PNISRQ8TF01 805 aaKnown RBP32.53■■■□□ 2.8
NELFB-201ENST00000343053 ABCA8O94911 1581 aa32.52■■■□□ 2.8
NELFB-201ENST00000343053 RGL3Q3MIN7 710 aa32.52■■■□□ 2.8
NELFB-201ENST00000343053 UHRF1BP1Q6BDS2 1440 aa32.49■■■□□ 2.79
NELFB-201ENST00000343053 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.47■■■□□ 2.792e-6■■■□□ 19
NELFB-201ENST00000343053 ROCK2O75116 1388 aaKnown RBP32.47■■■□□ 2.79
NELFB-201ENST00000343053 SHANK2Q9UPX8 1470 aa32.46■■■□□ 2.79
NELFB-201ENST00000343053 CCDC136Q96JN2 1154 aa32.44■■■□□ 2.78
NELFB-201ENST00000343053 ARID4BQ4LE39 1312 aaPredicted RBP32.42■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms