RNA–Protein interactions for RNA: ENST00000342756.9

SRP72-201, Transcript of signal recognition particle 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP72, Length 3,983 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP72-201ENST00000342756 RAD54L2Q9Y4B4 1467 aa14.5□□□□□ -0.09
SRP72-201ENST00000342756 C11orf95C9JLR9 678 aaPredicted RBP14.49□□□□□ -0.09
SRP72-201ENST00000342756 CUX1P39880 1505 aa14.49□□□□□ -0.09
SRP72-201ENST00000342756 ZNF644Q9H582 1327 aaPredicted RBP14.49□□□□□ -0.09
SRP72-201ENST00000342756 ST20-MTHFSA0A0A6YYL1 179 aa14.49□□□□□ -0.09
SRP72-201ENST00000342756 NBPF8Q3BBV2 869 aa14.48□□□□□ -0.09
SRP72-201ENST00000342756 UPF2Q9HAU5 1272 aaKnown RBP14.47□□□□□ -0.09
SRP72-201ENST00000342756 KNSTRNQ9Y448 316 aa14.47□□□□□ -0.09
SRP72-201ENST00000342756 AKNAQ7Z591 1439 aa14.47□□□□□ -0.09
SRP72-201ENST00000342756 TCERG1O14776 1098 aaKnown RBP14.46□□□□□ -0.1
SRP72-201ENST00000342756 PDE4AP27815 886 aa14.46□□□□□ -0.1
SRP72-201ENST00000342756 CNTLNQ9NXG0 1405 aa14.46□□□□□ -0.1
SRP72-201ENST00000342756 TIAM1Q13009 1591 aa14.45□□□□□ -0.1
SRP72-201ENST00000342756 MAPKBP1O60336 1514 aa14.45□□□□□ -0.1
SRP72-201ENST00000342756 NUP155O75694 1391 aa14.44□□□□□ -0.1
SRP72-201ENST00000342756 TNNT2P45379 298 aaPredicted RBP14.43□□□□□ -0.1
SRP72-201ENST00000342756 FRAT1Q92837 279 aaPredicted RBP14.43□□□□□ -0.1
SRP72-201ENST00000342756 USP47Q96K76 1375 aa14.42□□□□□ -0.1
SRP72-201ENST00000342756 RRP1P56182 461 aaKnown RBP14.42□□□□□ -0.1
SRP72-201ENST00000342756 MYOM3Q5VTT5 1437 aa14.42□□□□□ -0.1
SRP72-201ENST00000342756 HSP90AA1P07900 732 aaKnown RBP14.4□□□□□ -0.1
SRP72-201ENST00000342756 NCOA2Q15596 1464 aa14.4□□□□□ -0.1
SRP72-201ENST00000342756 KTN1Q86UP2 1357 aaKnown RBP14.4□□□□□ -0.1
SRP72-201ENST00000342756 CFTRP13569 1480 aa14.39□□□□□ -0.11
SRP72-201ENST00000342756 ROCK2O75116 1388 aaKnown RBP14.39□□□□□ -0.11
SRP72-201ENST00000342756 RALBP1Q15311 655 aa14.39□□□□□ -0.11
SRP72-201ENST00000342756 NLRP13Q86W25 1043 aa14.39□□□□□ -0.11
SRP72-201ENST00000342756 SPRYD3Q8NCJ5 442 aa14.39□□□□□ -0.11
SRP72-201ENST00000342756 FANCD2Q9BXW9 1451 aa14.38□□□□□ -0.11
SRP72-201ENST00000342756 CASKIN1Q8WXD9 1431 aa14.38□□□□□ -0.11
SRP72-201ENST00000342756 CDCA7LQ96GN5 454 aa14.37□□□□□ -0.11
SRP72-201ENST00000342756 CRBNQ96SW2 442 aa14.37□□□□□ -0.11
SRP72-201ENST00000342756 IL27Q8NEV9 243 aa14.36□□□□□ -0.11
SRP72-201ENST00000342756 SLKQ9H2G2 1235 aaPredicted RBP14.36□□□□□ -0.11
SRP72-201ENST00000342756 HFM1A2PYH4 1435 aa14.36□□□□□ -0.11
SRP72-201ENST00000342756 TMF1P82094 1093 aa14.36□□□□□ -0.11
SRP72-201ENST00000342756 SKAP1Q86WV1 359 aa14.35□□□□□ -0.11
SRP72-201ENST00000342756 MYBBP1AQ9BQG0 1328 aaKnown RBP14.35□□□□□ -0.11
SRP72-201ENST00000342756 HNRNPMP52272 730 aaKnown RBP eCLIP14.35□□□□□ -0.11
SRP72-201ENST00000342756 CCDC146Q8IYE0 955 aa14.35□□□□□ -0.11
SRP72-201ENST00000342756 NAIPQ13075 1403 aa14.35□□□□□ -0.11
SRP72-201ENST00000342756 NCAPD3P42695 1498 aa14.35□□□□□ -0.11
SRP72-201ENST00000342756 BECN1Q14457 450 aa14.34□□□□□ -0.11
SRP72-201ENST00000342756 ANO8Q9HCE9 1232 aaPredicted RBP14.32□□□□□ -0.12
SRP72-201ENST00000342756 KIF15Q9NS87 1388 aa14.32□□□□□ -0.12
SRP72-201ENST00000342756 PANK3Q9H999 370 aa14.32□□□□□ -0.12
SRP72-201ENST00000342756 FYCO1Q9BQS8 1478 aa14.31□□□□□ -0.12
SRP72-201ENST00000342756 PNISRQ8TF01 805 aaKnown RBP14.3□□□□□ -0.12
SRP72-201ENST00000342756 ANKRD30AQ9BXX3 1397 aa14.3□□□□□ -0.12
SRP72-201ENST00000342756 PCF11O94913 1555 aaKnown RBP14.29□□□□□ -0.12
SRP72-201ENST00000342756 PTPRKQ15262 1439 aa14.28□□□□□ -0.12
SRP72-201ENST00000342756 PDE3BQ13370 1112 aa14.28□□□□□ -0.12
SRP72-201ENST00000342756 GZF1Q9H116 711 aaPredicted RBP14.28□□□□□ -0.12
SRP72-201ENST00000342756 GOLGA2Q08379 1002 aa14.26□□□□□ -0.13
SRP72-201ENST00000342756 GSE1Q14687 1217 aa14.25□□□□□ -0.13
SRP72-201ENST00000342756 CLUAP1Q96AJ1 413 aa14.25□□□□□ -0.13
SRP72-201ENST00000342756 CDCA8Q53HL2 280 aa14.25□□□□□ -0.13
SRP72-201ENST00000342756 AQRO60306 1485 aaKnown RBP eCLIP14.25□□□□□ -0.134e-7■■■■□ 23.1
SRP72-201ENST00000342756 FTSJ3Q8IY81 847 aaKnown RBP14.24□□□□□ -0.13
SRP72-201ENST00000342756 BRPF3Q9ULD4 1205 aa14.24□□□□□ -0.13
SRP72-201ENST00000342756 USP35Q9P2H5 1018 aa14.23□□□□□ -0.13
SRP72-201ENST00000342756 GAPVD1Q14C86 1478 aa14.23□□□□□ -0.13
SRP72-201ENST00000342756 SLC24A1O60721 1099 aa14.23□□□□□ -0.13
SRP72-201ENST00000342756 NAP1L5Q96NT1 182 aaPredicted RBP14.23□□□□□ -0.13
SRP72-201ENST00000342756 SMG6Q86US8 1419 aaKnown RBP14.22□□□□□ -0.13
SRP72-201ENST00000342756 NFKBIBQ15653 356 aa14.22□□□□□ -0.13
SRP72-201ENST00000342756 BCL2L13Q9BXK5 485 aa14.21□□□□□ -0.13
SRP72-201ENST00000342756 PDS5BQ9NTI5 1447 aa14.21□□□□□ -0.13
SRP72-201ENST00000342756 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.21□□□□□ -0.13
SRP72-201ENST00000342756 NESP48681 1621 aa14.21□□□□□ -0.14
SRP72-201ENST00000342756 MS4A1P11836 297 aa14.21□□□□□ -0.14
SRP72-201ENST00000342756 NBPF1Q3BBV0 1214 aa14.21□□□□□ -0.14
SRP72-201ENST00000342756 FAM161AQ3B820 660 aa14.2□□□□□ -0.14
SRP72-201ENST00000342756 BACH2Q9BYV9 841 aa14.2□□□□□ -0.14
SRP72-201ENST00000342756 RRP7AQ9Y3A4 280 aaKnown RBP14.2□□□□□ -0.14
SRP72-201ENST00000342756 ANP32BQ92688 251 aaKnown RBP14.2□□□□□ -0.14
SRP72-201ENST00000342756 ARID4BQ4LE39 1312 aaPredicted RBP14.19□□□□□ -0.14
SRP72-201ENST00000342756 APAF1O14727 1248 aa14.19□□□□□ -0.14
SRP72-201ENST00000342756 ADAMTS8Q9UP79 889 aa14.19□□□□□ -0.14
SRP72-201ENST00000342756 HMGXB3Q12766 1538 aa14.19□□□□□ -0.14
SRP72-201ENST00000342756 CENPQQ7L2Z9 268 aaPredicted RBP14.18□□□□□ -0.14
SRP72-201ENST00000342756 U2SURPO15042 1029 aaKnown RBP14.18□□□□□ -0.14
SRP72-201ENST00000342756 TRIM44Q96DX7 344 aaPredicted RBP14.17□□□□□ -0.14
SRP72-201ENST00000342756 COG6Q9Y2V7 657 aa14.17□□□□□ -0.14
SRP72-201ENST00000342756 MAP3K1Q13233 1512 aa14.17□□□□□ -0.14
SRP72-201ENST00000342756 POLA1P09884 1462 aaPredicted RBP14.17□□□□□ -0.14
SRP72-201ENST00000342756 SAFB2Q14151 953 aaKnown RBP eCLIP14.17□□□□□ -0.14
SRP72-201ENST00000342756 NCOA1Q15788 1441 aa14.17□□□□□ -0.14
SRP72-201ENST00000342756 BIVM-ERCC5R4GMW8 1640 aa14.16□□□□□ -0.14
SRP72-201ENST00000342756 PRDM2Q13029 1718 aa14.15□□□□□ -0.14
SRP72-201ENST00000342756 MORC1Q86VD1 984 aa14.15□□□□□ -0.14
SRP72-201ENST00000342756 CFAP53Q96M91 514 aa14.15□□□□□ -0.14
SRP72-201ENST00000342756 ANKRD30BQ9BXX2 1392 aa14.15□□□□□ -0.14
SRP72-201ENST00000342756 FRAT2O75474 233 aaPredicted RBP14.15□□□□□ -0.14
SRP72-201ENST00000342756 NCLP19338 710 aaKnown RBP14.15□□□□□ -0.14
SRP72-201ENST00000342756 JPH4Q96JJ6 628 aa14.15□□□□□ -0.14
SRP72-201ENST00000342756 BRD4O60885 1362 aaPredicted RBP14.15□□□□□ -0.14
SRP72-201ENST00000342756 GLIPR1L2Q4G1C9 344 aa14.14□□□□□ -0.15
SRP72-201ENST00000342756 C20orf194Q5TEA3 1177 aa14.14□□□□□ -0.15
SRP72-201ENST00000342756 CCDC144AA2RUR9 1427 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms