RNA–Protein interactions for RNA: ENST00000340729.9

CLPB-202, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2 BASIC

Gene CLPB, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-202ENST00000340729 NCOA1Q15788 1441 aa28.58■■■□□ 2.17
CLPB-202ENST00000340729 MSH5O43196 834 aa28.58■■■□□ 2.17
CLPB-202ENST00000340729 CEP170Q5SW79 1584 aa28.57■■■□□ 2.16
CLPB-202ENST00000340729 SYNJ2O15056 1496 aa28.55■■■□□ 2.16
CLPB-202ENST00000340729 DISP1Q96F81 1524 aa28.55■■■□□ 2.16
CLPB-202ENST00000340729 KDM6BO15054 1643 aa28.54■■■□□ 2.16
CLPB-202ENST00000340729 PPP4R2Q9NY27 417 aa28.54■■■□□ 2.16
CLPB-202ENST00000340729 POLR1AO95602 1720 aaPredicted RBP28.52■■■□□ 2.16
CLPB-202ENST00000340729 CCDC7Q96M83 1385 aa28.51■■■□□ 2.15
CLPB-202ENST00000340729 RRP7BPQ9NSQ0 103 aa28.5■■■□□ 2.15
CLPB-202ENST00000340729 EPRSP07814 1512 aaKnown RBP28.48■■■□□ 2.15
CLPB-202ENST00000340729 MPHOSPH9Q99550 1183 aa28.48■■■□□ 2.15
CLPB-202ENST00000340729 CDK13Q14004 1512 aaKnown RBP28.48■■■□□ 2.15
CLPB-202ENST00000340729 PRKRIP1Q9H875 184 aaPredicted RBP28.47■■■□□ 2.15
CLPB-202ENST00000340729 ZBED9Q6R2W3 1325 aa28.47■■■□□ 2.15
CLPB-202ENST00000340729 RPRD2Q5VT52 1461 aaKnown RBP28.46■■■□□ 2.15
CLPB-202ENST00000340729 ROCK1Q13464 1354 aa28.45■■■□□ 2.14
CLPB-202ENST00000340729 CHMP7Q8WUX9 453 aaPredicted RBP28.44■■■□□ 2.14
CLPB-202ENST00000340729 L3MBTL2Q969R5 705 aa28.44■■■□□ 2.14
CLPB-202ENST00000340729 TEX14Q8IWB6 1497 aa28.43■■■□□ 2.14
CLPB-202ENST00000340729 IRX6P78412 446 aaPredicted RBP28.42■■■□□ 2.14
CLPB-202ENST00000340729 ANKRD30BQ9BXX2 1392 aa28.41■■■□□ 2.14
CLPB-202ENST00000340729 CHIC2Q9UKJ5 165 aa28.41■■■□□ 2.14
CLPB-202ENST00000340729 SPATA31E1Q6ZUB1 1445 aa28.4■■■□□ 2.14
CLPB-202ENST00000340729 NUP160Q12769 1436 aa28.4■■■□□ 2.14
CLPB-202ENST00000340729 CCDC184Q52MB2 194 aa28.39■■■□□ 2.13
CLPB-202ENST00000340729 RAPGEF6Q8TEU7 1601 aa28.38■■■□□ 2.13
CLPB-202ENST00000340729 FBLN2P98095 1184 aa28.38■■■□□ 2.13
CLPB-202ENST00000340729 C11orf95C9JLR9 678 aaPredicted RBP28.37■■■□□ 2.13
CLPB-202ENST00000340729 DNMT1P26358 1616 aaKnown RBP28.35■■■□□ 2.13
CLPB-202ENST00000340729 ARID3CA6NKF2 412 aa28.33■■■□□ 2.13
CLPB-202ENST00000340729 MRS2Q9HD23 443 aa28.33■■■□□ 2.13
CLPB-202ENST00000340729 MYT1LQ9UL68 1186 aa28.33■■■□□ 2.13
CLPB-202ENST00000340729 DAPK1P53355 1430 aa28.33■■■□□ 2.13
CLPB-202ENST00000340729 NUP153P49790 1475 aaKnown RBP28.33■■■□□ 2.13
CLPB-202ENST00000340729 ERICH6Q7L0X2 663 aa28.31■■■□□ 2.12
CLPB-202ENST00000340729 NBPF8Q3BBV2 869 aa28.28■■■□□ 2.12
CLPB-202ENST00000340729 KIF7Q2M1P5 1343 aa28.28■■■□□ 2.12
CLPB-202ENST00000340729 FAM9BQ8IZU0 186 aa28.27■■■□□ 2.12
CLPB-202ENST00000340729 CHD1O14646 1710 aa28.25■■■□□ 2.11
CLPB-202ENST00000340729 ABCC5O15440 1437 aa28.25■■■□□ 2.11
CLPB-202ENST00000340729 SMG6Q86US8 1419 aaKnown RBP28.25■■■□□ 2.11
CLPB-202ENST00000340729 PLB1Q6P1J6 1458 aa28.21■■■□□ 2.11
CLPB-202ENST00000340729 MBD5Q9P267 1494 aa28.2■■■□□ 2.11
CLPB-202ENST00000340729 FOXD1Q16676 465 aa28.2■■■□□ 2.1
CLPB-202ENST00000340729 JPH4Q96JJ6 628 aa28.19■■■□□ 2.1
CLPB-202ENST00000340729 CARMIL2Q6F5E8 1435 aa28.18■■■□□ 2.1
CLPB-202ENST00000340729 RNF123Q5XPI4 1314 aa28.17■■■□□ 2.1
CLPB-202ENST00000340729 B4GALNT3Q6L9W6 998 aa28.17■■■□□ 2.1
CLPB-202ENST00000340729 DHX29Q7Z478 1369 aaKnown RBP28.16■■■□□ 2.1
CLPB-202ENST00000340729 ARID4BQ4LE39 1312 aaPredicted RBP28.16■■■□□ 2.1
CLPB-202ENST00000340729 PZPP20742 1482 aa28.15■■■□□ 2.1
CLPB-202ENST00000340729 SLC4A1APQ9BWU0 796 aaKnown RBP28.12■■■□□ 2.09
CLPB-202ENST00000340729 KIF14Q15058 1648 aa28.11■■■□□ 2.09
CLPB-202ENST00000340729 ADGBQ8N7X0 1667 aa28.11■■■□□ 2.09
CLPB-202ENST00000340729 ABCA8O94911 1581 aa28.09■■■□□ 2.09
CLPB-202ENST00000340729 NUDCQ9Y266 331 aa28.09■■■□□ 2.09
CLPB-202ENST00000340729 BCORL1Q5H9F3 1711 aa28.07■■■□□ 2.08
CLPB-202ENST00000340729 ADGRL2O95490 1459 aa28.06■■■□□ 2.08
CLPB-202ENST00000340729 KDM5CP41229 1560 aa28.06■■■□□ 2.08
CLPB-202ENST00000340729 PRG4Q92954 1404 aaPredicted RBP28.06■■■□□ 2.08
CLPB-202ENST00000340729 ADCY10Q96PN6 1610 aa28.05■■■□□ 2.08
CLPB-202ENST00000340729 KIAA1107Q9UPP5 1409 aa28.05■■■□□ 2.08
CLPB-202ENST00000340729 ITSN2Q9NZM3 1697 aa28.04■■■□□ 2.08
CLPB-202ENST00000340729 TROQ12816 1431 aaPredicted RBP28.03■■■□□ 2.08
CLPB-202ENST00000340729 ROCK2O75116 1388 aaKnown RBP28.03■■■□□ 2.08
CLPB-202ENST00000340729 USP47Q96K76 1375 aa28.03■■■□□ 2.08
CLPB-202ENST00000340729 CROCC2H7BZ55 1655 aa28.01■■■□□ 2.07
CLPB-202ENST00000340729 NOP58Q9Y2X3 529 aaKnown RBP28■■■□□ 2.07
CLPB-202ENST00000340729 UHRF1BP1Q6BDS2 1440 aa28■■■□□ 2.07
CLPB-202ENST00000340729 CAMSAP2Q08AD1 1489 aa28■■■□□ 2.07
CLPB-202ENST00000340729 SHROOM2Q13796 1616 aa27.99■■■□□ 2.07
CLPB-202ENST00000340729 ZNF644Q9H582 1327 aaPredicted RBP27.98■■■□□ 2.07
CLPB-202ENST00000340729 RALGAPBQ86X10 1494 aa27.96■■■□□ 2.07
CLPB-202ENST00000340729 ARHGEF12Q9NZN5 1544 aa27.93■■■□□ 2.06
CLPB-202ENST00000340729 KTN1Q86UP2 1357 aaKnown RBP27.92■■■□□ 2.06
CLPB-202ENST00000340729 PNISRQ8TF01 805 aaKnown RBP27.91■■■□□ 2.06
CLPB-202ENST00000340729 ATP10BO94823 1461 aa27.91■■■□□ 2.06
CLPB-202ENST00000340729 CCDC136Q96JN2 1154 aa27.9■■■□□ 2.06
CLPB-202ENST00000340729 GPATCH8Q9UKJ3 1502 aaKnown RBP27.9■■■□□ 2.06
CLPB-202ENST00000340729 CDC42BPAQ5VT25 1732 aa27.89■■■□□ 2.06
CLPB-202ENST00000340729 LRPPRCP42704 1394 aaKnown RBP27.89■■■□□ 2.06
CLPB-202ENST00000340729 ERCC6L2Q5T890 1561 aa27.88■■■□□ 2.05
CLPB-202ENST00000340729 KIF15Q9NS87 1388 aa27.87■■■□□ 2.05
CLPB-202ENST00000340729 ANKRD30AQ9BXX3 1397 aa27.86■■■□□ 2.05
CLPB-202ENST00000340729 DEKP35659 375 aaKnown RBP27.86■■■□□ 2.05
CLPB-202ENST00000340729 PTPRGP23470 1445 aa27.86■■■□□ 2.05
CLPB-202ENST00000340729 BRD4O60885 1362 aaPredicted RBP27.84■■■□□ 2.05
CLPB-202ENST00000340729 KDM5DQ9BY66 1539 aa27.84■■■□□ 2.05
CLPB-202ENST00000340729 CFDP1Q9UEE9 299 aaPredicted RBP27.84■■■□□ 2.05
CLPB-202ENST00000340729 E9PCH4 1651 aa27.83■■■□□ 2.05
CLPB-202ENST00000340729 SHANK2Q9UPX8 1470 aa27.83■■■□□ 2.05
CLPB-202ENST00000340729 ANP32AP39687 249 aaKnown RBP27.82■■■□□ 2.04
CLPB-202ENST00000340729 PKD2Q13563 968 aa27.82■■■□□ 2.04
CLPB-202ENST00000340729 IPO9Q96P70 1041 aaKnown RBP27.82■■■□□ 2.04
CLPB-202ENST00000340729 ANKRD50Q9ULJ7 1429 aa27.81■■■□□ 2.04
CLPB-202ENST00000340729 ABCC10Q5T3U5 1492 aa27.81■■■□□ 2.04
CLPB-202ENST00000340729 TMC1Q8TDI8 760 aa27.8■■■□□ 2.04
CLPB-202ENST00000340729 PAK3O75914 559 aaPredicted RBP27.79■■■□□ 2.04
CLPB-202ENST00000340729 CLASP1Q7Z460 1538 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms