RNA–Protein interactions for RNA: ENST00000340369.3

XIRP1-201, Transcript of xin actin binding repeat containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XIRP1, Length 6,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP1-201ENST00000340369 NGDNQ8NEJ9 315 aaKnown RBP16.36■□□□□ 0.21
XIRP1-201ENST00000340369 CEP162Q5TB80 1403 aa16.35■□□□□ 0.21
XIRP1-201ENST00000340369 FTSJ3Q8IY81 847 aaKnown RBP16.34■□□□□ 0.21
XIRP1-201ENST00000340369 FHAD1B1AJZ9 1412 aa16.34■□□□□ 0.21
XIRP1-201ENST00000340369 ISY1Q9ULR0 285 aaKnown RBP16.34■□□□□ 0.21
XIRP1-201ENST00000340369 EVA1CP58658 441 aa16.33■□□□□ 0.21
XIRP1-201ENST00000340369 HDGFL2Q7Z4V5 671 aaPredicted RBP16.33■□□□□ 0.2
XIRP1-201ENST00000340369 OS9Q13438 667 aaPredicted RBP16.33■□□□□ 0.2
XIRP1-201ENST00000340369 CC2D1BQ5T0F9 858 aaKnown RBP16.32■□□□□ 0.2
XIRP1-201ENST00000340369 G3V3G9 751 aa16.3■□□□□ 0.2
XIRP1-201ENST00000340369 DCAF8Q5TAQ9 597 aa16.3■□□□□ 0.2
XIRP1-201ENST00000340369 RTF1Q92541 710 aaKnown RBP16.3■□□□□ 0.2
XIRP1-201ENST00000340369 CCDC88BA6NC98 1476 aa16.29■□□□□ 0.2
XIRP1-201ENST00000340369 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.28■□□□□ 0.2
XIRP1-201ENST00000340369 PLCB2Q00722 1185 aa16.28■□□□□ 0.2
XIRP1-201ENST00000340369 PTPRGP23470 1445 aa16.27■□□□□ 0.2
XIRP1-201ENST00000340369 SUPT16HQ9Y5B9 1047 aaKnown RBP16.27■□□□□ 0.19
XIRP1-201ENST00000340369 FANCD2Q9BXW9 1451 aa16.26■□□□□ 0.19
XIRP1-201ENST00000340369 LTV1Q96GA3 475 aaPredicted RBP16.26■□□□□ 0.19
XIRP1-201ENST00000340369 TMF1P82094 1093 aa16.26■□□□□ 0.19
XIRP1-201ENST00000340369 NAP1L5Q96NT1 182 aaPredicted RBP16.26■□□□□ 0.19
XIRP1-201ENST00000340369 MROH2BQ7Z745 1585 aa16.25■□□□□ 0.19
XIRP1-201ENST00000340369 PKD2Q13563 968 aa16.24■□□□□ 0.19
XIRP1-201ENST00000340369 MORC1Q86VD1 984 aa16.24■□□□□ 0.19
XIRP1-201ENST00000340369 RGS3P49796 1198 aa16.23■□□□□ 0.19
XIRP1-201ENST00000340369 PNNQ9H307 717 aaKnown RBP16.23■□□□□ 0.19
XIRP1-201ENST00000340369 RTN4Q9NQC3 1192 aaKnown RBP16.23■□□□□ 0.19
XIRP1-201ENST00000340369 FRAT1Q92837 279 aaPredicted RBP16.22■□□□□ 0.19
XIRP1-201ENST00000340369 GTF2E1P29083 439 aaPredicted RBP16.2■□□□□ 0.18
XIRP1-201ENST00000340369 FOXD1Q16676 465 aa16.2■□□□□ 0.18
XIRP1-201ENST00000340369 HSP90AB1P08238 724 aaKnown RBP16.19■□□□□ 0.18
XIRP1-201ENST00000340369 NAP1L2Q9ULW6 460 aaPredicted RBP16.19■□□□□ 0.18
XIRP1-201ENST00000340369 FGD1P98174 961 aa16.19■□□□□ 0.18
XIRP1-201ENST00000340369 ERICH6BQ5W0A0 696 aa16.19■□□□□ 0.18
XIRP1-201ENST00000340369 NUP155O75694 1391 aa16.18■□□□□ 0.18
XIRP1-201ENST00000340369 ATF3P18847 181 aa16.18■□□□□ 0.18
XIRP1-201ENST00000340369 GOLGA6L6A8MZA4 724 aa16.17■□□□□ 0.18
XIRP1-201ENST00000340369 PIP4K2BP78356 416 aa16.17■□□□□ 0.18
XIRP1-201ENST00000340369 AMPHP49418 695 aa16.17■□□□□ 0.18
XIRP1-201ENST00000340369 SIN3AQ96ST3 1273 aa16.17■□□□□ 0.18
XIRP1-201ENST00000340369 ABCC8Q09428 1581 aa16.17■□□□□ 0.18
XIRP1-201ENST00000340369 TNIKQ9UKE5 1360 aa16.16■□□□□ 0.18
XIRP1-201ENST00000340369 KCNJ4P48050 445 aa16.15■□□□□ 0.18
XIRP1-201ENST00000340369 ANKRD30AQ9BXX3 1397 aa16.15■□□□□ 0.18
XIRP1-201ENST00000340369 SYTL4Q96C24 671 aaPredicted RBP16.15■□□□□ 0.18
XIRP1-201ENST00000340369 ATAD2BQ9ULI0 1458 aa16.15■□□□□ 0.18
XIRP1-201ENST00000340369 NCBP3Q53F19 620 aaKnown RBP16.14■□□□□ 0.17
XIRP1-201ENST00000340369 ARHGAP35Q9NRY4 1499 aa16.13■□□□□ 0.17
XIRP1-201ENST00000340369 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.13■□□□□ 0.17
XIRP1-201ENST00000340369 SF3B2Q13435 895 aaKnown RBP16.13■□□□□ 0.17
XIRP1-201ENST00000340369 FMN1Q68DA7 1419 aa16.12■□□□□ 0.17
XIRP1-201ENST00000340369 CLSTN1O94985 981 aa16.12■□□□□ 0.17
XIRP1-201ENST00000340369 NOP58Q9Y2X3 529 aaKnown RBP16.11■□□□□ 0.17
XIRP1-201ENST00000340369 CHMP3Q9Y3E7 222 aa16.11■□□□□ 0.17
XIRP1-201ENST00000340369 PPP4R2Q9NY27 417 aa16.11■□□□□ 0.17
XIRP1-201ENST00000340369 MYO15BQ96JP2 1530 aa16.11■□□□□ 0.17
XIRP1-201ENST00000340369 PSME1Q06323 249 aa16.1■□□□□ 0.17
XIRP1-201ENST00000340369 FHOD3Q2V2M9 1422 aa16.09■□□□□ 0.17
XIRP1-201ENST00000340369 NUTM2BA6NNL0 878 aaPredicted RBP16.09■□□□□ 0.17
XIRP1-201ENST00000340369 NUTM2EB1AL46 878 aaPredicted RBP16.09■□□□□ 0.17
XIRP1-201ENST00000340369 NUTM2AQ8IVF1 878 aaPredicted RBP16.09■□□□□ 0.17
XIRP1-201ENST00000340369 TAF7LQ5H9L4 462 aa16.08■□□□□ 0.16
XIRP1-201ENST00000340369 CHMP4BQ9H444 224 aaKnown RBP16.08■□□□□ 0.16
XIRP1-201ENST00000340369 TRAK1Q9UPV9 953 aa16.07■□□□□ 0.16
XIRP1-201ENST00000340369 WIZO95785 1651 aa16.07■□□□□ 0.16
XIRP1-201ENST00000340369 GOLGA6L4A6NEF3 574 aa16.07■□□□□ 0.16
XIRP1-201ENST00000340369 NRDCO43847 1150 aa16.07■□□□□ 0.16
XIRP1-201ENST00000340369 PPP1R1BQ9UD71 204 aaPredicted RBP16.07■□□□□ 0.16
XIRP1-201ENST00000340369 RSPH4AQ5TD94 716 aa16.06■□□□□ 0.16
XIRP1-201ENST00000340369 TERF2IPQ9NYB0 399 aa16.06■□□□□ 0.16
XIRP1-201ENST00000340369 SPRYD3Q8NCJ5 442 aa16.05■□□□□ 0.16
XIRP1-201ENST00000340369 HSCBQ8IWL3 235 aa16.05■□□□□ 0.16
XIRP1-201ENST00000340369 MS4A1P11836 297 aa16.04■□□□□ 0.16
XIRP1-201ENST00000340369 B4GALNT3Q6L9W6 998 aa16.04■□□□□ 0.16
XIRP1-201ENST00000340369 AQRO60306 1485 aaKnown RBP eCLIP16.04■□□□□ 0.16
XIRP1-201ENST00000340369 RAPGEF2Q9Y4G8 1499 aa16.04■□□□□ 0.16
XIRP1-201ENST00000340369 CCDC18Q5T9S5 1454 aa16.03■□□□□ 0.16
XIRP1-201ENST00000340369 ROCK2O75116 1388 aaKnown RBP16.03■□□□□ 0.16
XIRP1-201ENST00000340369 FRAT2O75474 233 aaPredicted RBP16.02■□□□□ 0.16
XIRP1-201ENST00000340369 CHAF1AQ13111 956 aaPredicted RBP16.02■□□□□ 0.16
XIRP1-201ENST00000340369 DRC7Q8IY82 874 aa16.02■□□□□ 0.15
XIRP1-201ENST00000340369 U2AF1L5P0DN76 240 aaPredicted RBP16.01■□□□□ 0.15
XIRP1-201ENST00000340369 U2AF1Q01081 240 aaKnown RBP eCLIP16.01■□□□□ 0.15
XIRP1-201ENST00000340369 TOP2AP11388 1531 aaKnown RBP16.01■□□□□ 0.15
XIRP1-201ENST00000340369 GORABQ5T7V8 394 aa16■□□□□ 0.15
XIRP1-201ENST00000340369 GAPVD1Q14C86 1478 aa15.99■□□□□ 0.15
XIRP1-201ENST00000340369 MSNP26038 577 aaKnown RBP15.99■□□□□ 0.15
XIRP1-201ENST00000340369 PROSER2Q86WR7 435 aaPredicted RBP15.99■□□□□ 0.15
XIRP1-201ENST00000340369 EIF3AQ14152 1382 aaKnown RBP15.99■□□□□ 0.15
XIRP1-201ENST00000340369 MCCP23508 829 aa15.98■□□□□ 0.15
XIRP1-201ENST00000340369 RAD54L2Q9Y4B4 1467 aa15.97■□□□□ 0.15
XIRP1-201ENST00000340369 AMER1Q5JTC6 1135 aaPredicted RBP15.97■□□□□ 0.15
XIRP1-201ENST00000340369 USP35Q9P2H5 1018 aa15.97■□□□□ 0.15
XIRP1-201ENST00000340369 VGFO15240 615 aaPredicted RBP15.97■□□□□ 0.15
XIRP1-201ENST00000340369 C1orf141Q5JVX7 400 aa15.97■□□□□ 0.15
XIRP1-201ENST00000340369 MINK1Q8N4C8 1332 aaPredicted RBP15.97■□□□□ 0.15
XIRP1-201ENST00000340369 APBB1O00213 710 aa15.96■□□□□ 0.15
XIRP1-201ENST00000340369 KANK4Q5T7N3 995 aaPredicted RBP15.96■□□□□ 0.15
XIRP1-201ENST00000340369 MPHOSPH9Q99550 1183 aa15.96■□□□□ 0.15
XIRP1-201ENST00000340369 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms