RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 PPP1R15AO75807 674 aaPredicted RBP14.42□□□□□ -0.1
RBFOX1-202ENST00000340209 HFM1A2PYH4 1435 aa14.42□□□□□ -0.1
RBFOX1-202ENST00000340209 RAPGEF6Q8TEU7 1601 aa14.42□□□□□ -0.1
RBFOX1-202ENST00000340209 KDM2AQ9Y2K7 1162 aa14.41□□□□□ -0.1
RBFOX1-202ENST00000340209 TROQ12816 1431 aaPredicted RBP14.39□□□□□ -0.11
RBFOX1-202ENST00000340209 ARHGEF11O15085 1522 aa14.39□□□□□ -0.11
RBFOX1-202ENST00000340209 UACAQ9BZF9 1416 aa14.39□□□□□ -0.11
RBFOX1-202ENST00000340209 NUP160Q12769 1436 aa14.38□□□□□ -0.11
RBFOX1-202ENST00000340209 L3MBTL2Q969R5 705 aa14.37□□□□□ -0.11
RBFOX1-202ENST00000340209 PKD2Q13563 968 aa14.36□□□□□ -0.11
RBFOX1-202ENST00000340209 DAPK1P53355 1430 aa14.36□□□□□ -0.11
RBFOX1-202ENST00000340209 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.35□□□□□ -0.11
RBFOX1-202ENST00000340209 ABCC5O15440 1437 aa14.35□□□□□ -0.11
RBFOX1-202ENST00000340209 KIF14Q15058 1648 aa14.34□□□□□ -0.11
RBFOX1-202ENST00000340209 RGL3Q3MIN7 710 aa14.34□□□□□ -0.11
RBFOX1-202ENST00000340209 ATP10BO94823 1461 aa14.33□□□□□ -0.11
RBFOX1-202ENST00000340209 KDM6BO15054 1643 aa14.33□□□□□ -0.12
RBFOX1-202ENST00000340209 MIA2Q96PC5 1412 aa14.32□□□□□ -0.12
RBFOX1-202ENST00000340209 CAMSAP2Q08AD1 1489 aa14.32□□□□□ -0.12
RBFOX1-202ENST00000340209 NUP155O75694 1391 aa14.31□□□□□ -0.12
RBFOX1-202ENST00000340209 ERCC6L2Q5T890 1561 aa14.31□□□□□ -0.12
RBFOX1-202ENST00000340209 ANP32CO43423 234 aa14.31□□□□□ -0.12
RBFOX1-202ENST00000340209 SENP3-EIF4A1A0A087X0R7 540 aa14.3□□□□□ -0.12
RBFOX1-202ENST00000340209 HSPA5P11021 654 aaKnown RBP14.3□□□□□ -0.12
RBFOX1-202ENST00000340209 GPATCH8Q9UKJ3 1502 aaKnown RBP14.3□□□□□ -0.12
RBFOX1-202ENST00000340209 CHD1O14646 1710 aa14.29□□□□□ -0.12
RBFOX1-202ENST00000340209 ANKRD30AQ9BXX3 1397 aa14.29□□□□□ -0.12
RBFOX1-202ENST00000340209 SENP3Q9H4L4 574 aaPredicted RBP14.29□□□□□ -0.12
RBFOX1-202ENST00000340209 EIF4G2P78344 907 aaKnown RBP eCLIP14.26□□□□□ -0.13
RBFOX1-202ENST00000340209 TCOF1Q13428 1488 aaKnown RBP14.25□□□□□ -0.13
RBFOX1-202ENST00000340209 KIF15Q9NS87 1388 aa14.24□□□□□ -0.13
RBFOX1-202ENST00000340209 NPM1P06748 294 aaKnown RBP eCLIP14.23□□□□□ -0.13
RBFOX1-202ENST00000340209 NBPF8Q3BBV2 869 aa14.23□□□□□ -0.13
RBFOX1-202ENST00000340209 ANKRD50Q9ULJ7 1429 aa14.23□□□□□ -0.13
RBFOX1-202ENST00000340209 C9orf84Q5VXU9 1444 aa14.23□□□□□ -0.13
RBFOX1-202ENST00000340209 BCANQ96GW7 911 aa14.23□□□□□ -0.13
RBFOX1-202ENST00000340209 TIMELESSQ9UNS1 1208 aa14.23□□□□□ -0.13
RBFOX1-202ENST00000340209 ARHGAP5Q13017 1502 aa14.23□□□□□ -0.13
RBFOX1-202ENST00000340209 AFAP1Q8N556 730 aa14.22□□□□□ -0.13
RBFOX1-202ENST00000340209 DCAF11Q8TEB1 546 aa14.22□□□□□ -0.13
RBFOX1-202ENST00000340209 NCOA1Q15788 1441 aa14.21□□□□□ -0.13
RBFOX1-202ENST00000340209 AKNAQ7Z591 1439 aa14.2□□□□□ -0.14
RBFOX1-202ENST00000340209 EFCAB2Q5VUJ9 269 aa14.18□□□□□ -0.14
RBFOX1-202ENST00000340209 ABCA8O94911 1581 aa14.17□□□□□ -0.14
RBFOX1-202ENST00000340209 OSCARQ8IYS5 282 aa14.17□□□□□ -0.14
RBFOX1-202ENST00000340209 DNMT1P26358 1616 aaKnown RBP14.16□□□□□ -0.14
RBFOX1-202ENST00000340209 ROCK1Q13464 1354 aa14.15□□□□□ -0.14
RBFOX1-202ENST00000340209 FAM9BQ8IZU0 186 aa14.15□□□□□ -0.14
RBFOX1-202ENST00000340209 CARD11Q9BXL7 1154 aa14.15□□□□□ -0.14
RBFOX1-202ENST00000340209 CHGAP10645 457 aaKnown RBP14.15□□□□□ -0.14
RBFOX1-202ENST00000340209 ANKRD30BQ9BXX2 1392 aa14.15□□□□□ -0.14
RBFOX1-202ENST00000340209 DENND4BO75064 1496 aaPredicted RBP14.14□□□□□ -0.15
RBFOX1-202ENST00000340209 C11orf95C9JLR9 678 aaPredicted RBP14.14□□□□□ -0.15
RBFOX1-202ENST00000340209 CYB5RLQ6IPT4 315 aa14.14□□□□□ -0.15
RBFOX1-202ENST00000340209 WASHC2AQ641Q2 1341 aa14.14□□□□□ -0.15
RBFOX1-202ENST00000340209 SPAG9O60271 1321 aaKnown RBP14.12□□□□□ -0.15
RBFOX1-202ENST00000340209 SYCP2Q9BX26 1530 aa14.12□□□□□ -0.15
RBFOX1-202ENST00000340209 ITSN2Q9NZM3 1697 aa14.12□□□□□ -0.15
RBFOX1-202ENST00000340209 HNRNPUQ00839 825 aaKnown RBP eCLIP14.12□□□□□ -0.15
RBFOX1-202ENST00000340209 GCC2Q8IWJ2 1684 aa14.11□□□□□ -0.15
RBFOX1-202ENST00000340209 ABCC10Q5T3U5 1492 aa14.1□□□□□ -0.15
RBFOX1-202ENST00000340209 KIF3BO15066 747 aa14.1□□□□□ -0.15
RBFOX1-202ENST00000340209 KIAA1107Q9UPP5 1409 aa14.08□□□□□ -0.15
RBFOX1-202ENST00000340209 CDC42BPAQ5VT25 1732 aa14.08□□□□□ -0.16
RBFOX1-202ENST00000340209 PZPP20742 1482 aa14.08□□□□□ -0.16
RBFOX1-202ENST00000340209 CCDC141Q6ZP82 1450 aa14.08□□□□□ -0.16
RBFOX1-202ENST00000340209 TTC37Q6PGP7 1564 aa14.08□□□□□ -0.16
RBFOX1-202ENST00000340209 GGT6Q6P531 493 aa14.07□□□□□ -0.16
RBFOX1-202ENST00000340209 ABCC2Q92887 1545 aa14.07□□□□□ -0.16
RBFOX1-202ENST00000340209 MRS2Q9HD23 443 aa14.06□□□□□ -0.16
RBFOX1-202ENST00000340209 PLEKHH2Q8IVE3 1493 aa14.06□□□□□ -0.16
RBFOX1-202ENST00000340209 IRX6P78412 446 aaPredicted RBP14.05□□□□□ -0.16
RBFOX1-202ENST00000340209 ST20-MTHFSA0A0A6YYL1 179 aa14.05□□□□□ -0.16
RBFOX1-202ENST00000340209 RPRD2Q5VT52 1461 aaKnown RBP14.04□□□□□ -0.16
RBFOX1-202ENST00000340209 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.04□□□□□ -0.16
RBFOX1-202ENST00000340209 CCDC184Q52MB2 194 aa14.04□□□□□ -0.16
RBFOX1-202ENST00000340209 TRAPPC8Q9Y2L5 1435 aa14.03□□□□□ -0.16
RBFOX1-202ENST00000340209 USP47Q96K76 1375 aa14.03□□□□□ -0.16
RBFOX1-202ENST00000340209 RSPH4AQ5TD94 716 aa14.03□□□□□ -0.16
RBFOX1-202ENST00000340209 SAMD9LQ8IVG5 1584 aa14.03□□□□□ -0.16
RBFOX1-202ENST00000340209 KIF7Q2M1P5 1343 aa14.03□□□□□ -0.16
RBFOX1-202ENST00000340209 NBPF1Q3BBV0 1214 aa14.03□□□□□ -0.16
RBFOX1-202ENST00000340209 SALL2Q9Y467 1007 aaPredicted RBP14.03□□□□□ -0.16
RBFOX1-202ENST00000340209 SCAPERQ9BY12 1400 aa14.03□□□□□ -0.16
RBFOX1-202ENST00000340209 CCDC144AA2RUR9 1427 aa14.02□□□□□ -0.16
RBFOX1-202ENST00000340209 FKBP8Q14318 412 aa14.02□□□□□ -0.17
RBFOX1-202ENST00000340209 ROCK2O75116 1388 aaKnown RBP14.02□□□□□ -0.17
RBFOX1-202ENST00000340209 MBD5Q9P267 1494 aa14.01□□□□□ -0.17
RBFOX1-202ENST00000340209 NEFLP07196 543 aa14.01□□□□□ -0.17
RBFOX1-202ENST00000340209 NUTM2DQ5VT03 806 aaPredicted RBP14.01□□□□□ -0.17
RBFOX1-202ENST00000340209 RAPGEF3O95398 923 aa14□□□□□ -0.17
RBFOX1-202ENST00000340209 PLPPR3Q6T4P5 718 aa14□□□□□ -0.17
RBFOX1-202ENST00000340209 CCDC7Q96M83 1385 aa13.99□□□□□ -0.17
RBFOX1-202ENST00000340209 ADCY10Q96PN6 1610 aa13.98□□□□□ -0.17
RBFOX1-202ENST00000340209 ARHGEF12Q9NZN5 1544 aa13.97□□□□□ -0.17
RBFOX1-202ENST00000340209 ZCCHC11Q5TAX3 1644 aaKnown RBP13.97□□□□□ -0.17
RBFOX1-202ENST00000340209 CDC42BPBQ9Y5S2 1711 aa13.97□□□□□ -0.17
RBFOX1-202ENST00000340209 PLCH2O75038 1416 aa13.97□□□□□ -0.17
RBFOX1-202ENST00000340209 ADGRL2O95490 1459 aa13.97□□□□□ -0.17
RBFOX1-202ENST00000340209 KDM5BQ9UGL1 1544 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms