RNA–Protein interactions for RNA: ENST00000339113.8

ATAD3A-201, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 2

Gene ATAD3A, Length 2,330 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-201ENST00000339113 DNMT1P26358 1616 aaKnown RBP25.07■■□□□ 1.6
ATAD3A-201ENST00000339113 AKNAQ7Z591 1439 aa25.05■■□□□ 1.6
ATAD3A-201ENST00000339113 CDC42BPAQ5VT25 1732 aa25.04■■□□□ 1.6
ATAD3A-201ENST00000339113 SIN3AQ96ST3 1273 aa25.04■■□□□ 1.6
ATAD3A-201ENST00000339113 OSCARQ8IYS5 282 aa25.03■■□□□ 1.6
ATAD3A-201ENST00000339113 KDM6BO15054 1643 aa25.02■■□□□ 1.6
ATAD3A-201ENST00000339113 UHRF1BP1LA0JNW5 1464 aa25.01■■□□□ 1.59
ATAD3A-201ENST00000339113 GCC2Q8IWJ2 1684 aa25■■□□□ 1.59
ATAD3A-201ENST00000339113 ROCK1Q13464 1354 aa25■■□□□ 1.59
ATAD3A-201ENST00000339113 ZNF316A6NFI3 1004 aaPredicted RBP24.99■■□□□ 1.59
ATAD3A-201ENST00000339113 NEUROD1Q13562 356 aa24.97■■□□□ 1.59
ATAD3A-201ENST00000339113 KDM5BQ9UGL1 1544 aa24.96■■□□□ 1.59
ATAD3A-201ENST00000339113 KCNH8Q96L42 1107 aa24.95■■□□□ 1.58
ATAD3A-201ENST00000339113 ZCCHC11Q5TAX3 1644 aaKnown RBP24.95■■□□□ 1.58
ATAD3A-201ENST00000339113 TRIM52Q96A61 297 aa24.92■■□□□ 1.58
ATAD3A-201ENST00000339113 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.92■■□□□ 1.58
ATAD3A-201ENST00000339113 TTC37Q6PGP7 1564 aa24.91■■□□□ 1.58
ATAD3A-201ENST00000339113 NCOA1Q15788 1441 aa24.91■■□□□ 1.58
ATAD3A-201ENST00000339113 HNRNPMP52272 730 aaKnown RBP eCLIP24.9■■□□□ 1.581e-9■■□□□ 13.3
ATAD3A-201ENST00000339113 CDC42BPBQ9Y5S2 1711 aa24.89■■□□□ 1.58
ATAD3A-201ENST00000339113 ACIN1Q9UKV3 1341 aaKnown RBP24.88■■□□□ 1.57
ATAD3A-201ENST00000339113 DENND4BO75064 1496 aaPredicted RBP24.88■■□□□ 1.57
ATAD3A-201ENST00000339113 PREX2Q70Z35 1606 aa24.87■■□□□ 1.57
ATAD3A-201ENST00000339113 CROCC2H7BZ55 1655 aa24.86■■□□□ 1.57
ATAD3A-201ENST00000339113 ADGRL2O95490 1459 aa24.85■■□□□ 1.57
ATAD3A-201ENST00000339113 SAMD9LQ8IVG5 1584 aa24.85■■□□□ 1.57
ATAD3A-201ENST00000339113 MBD5Q9P267 1494 aa24.85■■□□□ 1.57
ATAD3A-201ENST00000339113 DIEXFQ68CQ4 756 aaKnown RBP24.85■■□□□ 1.57
ATAD3A-201ENST00000339113 MPHOSPH9Q99550 1183 aa24.83■■□□□ 1.57
ATAD3A-201ENST00000339113 ANKRD30AQ9BXX3 1397 aa24.82■■□□□ 1.56
ATAD3A-201ENST00000339113 ADGBQ8N7X0 1667 aa24.81■■□□□ 1.56
ATAD3A-201ENST00000339113 ARHGAP5Q13017 1502 aa24.81■■□□□ 1.56
ATAD3A-201ENST00000339113 C9orf84Q5VXU9 1444 aa24.81■■□□□ 1.56
ATAD3A-201ENST00000339113 TSPY4P0CV99 314 aa24.8■■□□□ 1.56
ATAD3A-201ENST00000339113 TSPY10P0CW01 314 aa24.8■■□□□ 1.56
ATAD3A-201ENST00000339113 TIMELESSQ9UNS1 1208 aa24.79■■□□□ 1.56
ATAD3A-201ENST00000339113 SHANK2Q9UPX8 1470 aa24.79■■□□□ 1.56
ATAD3A-201ENST00000339113 ARHGEF5Q12774 1597 aa24.78■■□□□ 1.56
ATAD3A-201ENST00000339113 FOXD1Q16676 465 aa24.77■■□□□ 1.56
ATAD3A-201ENST00000339113 PLCH2O75038 1416 aa24.76■■□□□ 1.55
ATAD3A-201ENST00000339113 MYO5CQ9NQX4 1742 aa24.76■■□□□ 1.55
ATAD3A-201ENST00000339113 SYCP2Q9BX26 1530 aa24.74■■□□□ 1.55
ATAD3A-201ENST00000339113 CCDC141Q6ZP82 1450 aa24.74■■□□□ 1.55
ATAD3A-201ENST00000339113 PPP1R15AO75807 674 aaPredicted RBP24.73■■□□□ 1.55
ATAD3A-201ENST00000339113 WDR7Q9Y4E6 1490 aa24.73■■□□□ 1.55
ATAD3A-201ENST00000339113 ANKRD50Q9ULJ7 1429 aa24.72■■□□□ 1.55
ATAD3A-201ENST00000339113 RSPH4AQ5TD94 716 aa24.72■■□□□ 1.55
ATAD3A-201ENST00000339113 CENPBP07199 599 aaPredicted RBP24.7■■□□□ 1.55
ATAD3A-201ENST00000339113 SLC4A1APQ9BWU0 796 aaKnown RBP24.7■■□□□ 1.54
ATAD3A-201ENST00000339113 TONSLQ96HA7 1378 aa24.7■■□□□ 1.54
ATAD3A-201ENST00000339113 ARHGEF12Q9NZN5 1544 aa24.69■■□□□ 1.54
ATAD3A-201ENST00000339113 EFCAB2Q5VUJ9 269 aa24.69■■□□□ 1.54
ATAD3A-201ENST00000339113 KIAA1107Q9UPP5 1409 aa24.69■■□□□ 1.54
ATAD3A-201ENST00000339113 KIF15Q9NS87 1388 aa24.68■■□□□ 1.54
ATAD3A-201ENST00000339113 PZPP20742 1482 aa24.68■■□□□ 1.54
ATAD3A-201ENST00000339113 ASXL2Q76L83 1435 aa24.68■■□□□ 1.54
ATAD3A-201ENST00000339113 PLEKHH2Q8IVE3 1493 aa24.65■■□□□ 1.54
ATAD3A-201ENST00000339113 ANKRD30BQ9BXX2 1392 aa24.64■■□□□ 1.54
ATAD3A-201ENST00000339113 NPM1P06748 294 aaKnown RBP eCLIP24.62■■□□□ 1.53
ATAD3A-201ENST00000339113 MAST1Q9Y2H9 1570 aa24.59■■□□□ 1.53
ATAD3A-201ENST00000339113 TRAPPC8Q9Y2L5 1435 aa24.59■■□□□ 1.53
ATAD3A-201ENST00000339113 ABCC1P33527 1531 aa24.58■■□□□ 1.53
ATAD3A-201ENST00000339113 NUP155O75694 1391 aa24.58■■□□□ 1.53
ATAD3A-201ENST00000339113 ABCA9Q8IUA7 1624 aa24.57■■□□□ 1.52
ATAD3A-201ENST00000339113 ARAP3Q8WWN8 1544 aa24.57■■□□□ 1.52
ATAD3A-201ENST00000339113 PKD2Q13563 968 aa24.56■■□□□ 1.52
ATAD3A-201ENST00000339113 AFAP1Q8N556 730 aa24.53■■□□□ 1.52
ATAD3A-201ENST00000339113 FANCAO15360 1455 aa24.52■■□□□ 1.52
ATAD3A-201ENST00000339113 GTF3C3Q9Y5Q9 886 aa24.52■■□□□ 1.52
ATAD3A-201ENST00000339113 RPRD2Q5VT52 1461 aaKnown RBP24.52■■□□□ 1.52
ATAD3A-201ENST00000339113 L3MBTL2Q969R5 705 aa24.51■■□□□ 1.51
ATAD3A-201ENST00000339113 PLXNC1O60486 1568 aa24.49■■□□□ 1.51
ATAD3A-201ENST00000339113 KDM5DQ9BY66 1539 aa24.49■■□□□ 1.51
ATAD3A-201ENST00000339113 CYB5RLQ6IPT4 315 aa24.48■■□□□ 1.51
ATAD3A-201ENST00000339113 MIER1Q8N108 512 aa24.47■■□□□ 1.51
ATAD3A-201ENST00000339113 HIRIP3Q9BW71 556 aaPredicted RBP24.47■■□□□ 1.51
ATAD3A-201ENST00000339113 SPAG9O60271 1321 aaKnown RBP24.45■■□□□ 1.51
ATAD3A-201ENST00000339113 DUOX2Q9NRD8 1548 aa24.43■■□□□ 1.5
ATAD3A-201ENST00000339113 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.43■■□□□ 1.5
ATAD3A-201ENST00000339113 SCAPERQ9BY12 1400 aa24.43■■□□□ 1.5
ATAD3A-201ENST00000339113 ADGRL1O94910 1474 aa24.42■■□□□ 1.5
ATAD3A-201ENST00000339113 TEX14Q8IWB6 1497 aa24.42■■□□□ 1.5
ATAD3A-201ENST00000339113 FAM135AQ9P2D6 1515 aa24.41■■□□□ 1.5
ATAD3A-201ENST00000339113 RTEL1-TNFRSF6BF6WH68 1400 aa24.4■■□□□ 1.5
ATAD3A-201ENST00000339113 CD109Q6YHK3 1445 aa24.4■■□□□ 1.5
ATAD3A-201ENST00000339113 RIMBP3CA6NJZ7 1639 aa24.39■■□□□ 1.49
ATAD3A-201ENST00000339113 RIMBP3BA6NNM3 1639 aa24.39■■□□□ 1.49
ATAD3A-201ENST00000339113 RIMBP3Q9UFD9 1639 aa24.39■■□□□ 1.49
ATAD3A-201ENST00000339113 ZFYVE16Q7Z3T8 1539 aa24.38■■□□□ 1.49
ATAD3A-201ENST00000339113 UNC13BO14795 1591 aa24.38■■□□□ 1.49
ATAD3A-201ENST00000339113 ERBINQ96RT1 1412 aa24.38■■□□□ 1.49
ATAD3A-201ENST00000339113 NBPF8Q3BBV2 869 aa24.36■■□□□ 1.49
ATAD3A-201ENST00000339113 ATP7AQ04656 1500 aa24.31■■□□□ 1.48
ATAD3A-201ENST00000339113 INO80Q9ULG1 1556 aaPredicted RBP24.31■■□□□ 1.48
ATAD3A-201ENST00000339113 MYT1LQ9UL68 1186 aa24.3■■□□□ 1.48
ATAD3A-201ENST00000339113 MYT1Q01538 1121 aa24.3■■□□□ 1.48
ATAD3A-201ENST00000339113 MAGI2Q86UL8 1455 aa24.3■■□□□ 1.48
ATAD3A-201ENST00000339113 IQGAP3Q86VI3 1631 aa24.28■■□□□ 1.48
ATAD3A-201ENST00000339113 DDX10Q13206 875 aaKnown RBP24.27■■□□□ 1.48
ATAD3A-201ENST00000339113 PLA2R1Q13018 1463 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms