RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 ZMYM4Q5VZL5 1548 aa23.28■■□□□ 1.32
COMMD4-202ENST00000338995 MYT1LQ9UL68 1186 aa23.27■■□□□ 1.32
COMMD4-202ENST00000338995 HECW1Q76N89 1606 aa23.26■■□□□ 1.31
COMMD4-202ENST00000338995 CLIP1P30622 1438 aa23.25■■□□□ 1.31
COMMD4-202ENST00000338995 YEATS2Q9ULM3 1422 aa23.25■■□□□ 1.31
COMMD4-202ENST00000338995 ARHGAP35Q9NRY4 1499 aa23.25■■□□□ 1.31
COMMD4-202ENST00000338995 PCF11O94913 1555 aaKnown RBP23.24■■□□□ 1.31
COMMD4-202ENST00000338995 ATP10AO60312 1499 aa23.22■■□□□ 1.31
COMMD4-202ENST00000338995 RIMS1Q86UR5 1692 aaKnown RBP23.22■■□□□ 1.31
COMMD4-202ENST00000338995 TROQ12816 1431 aaPredicted RBP23.21■■□□□ 1.31
COMMD4-202ENST00000338995 LMTK3Q96Q04 1460 aa23.19■■□□□ 1.3
COMMD4-202ENST00000338995 HSPA2P54652 639 aa23.19■■□□□ 1.3
COMMD4-202ENST00000338995 AFAP1Q8N556 730 aa23.18■■□□□ 1.3
COMMD4-202ENST00000338995 C9orf84Q5VXU9 1444 aa23.16■■□□□ 1.3
COMMD4-202ENST00000338995 MYO5CQ9NQX4 1742 aa23.16■■□□□ 1.3
COMMD4-202ENST00000338995 KIF14Q15058 1648 aa23.15■■□□□ 1.3
COMMD4-202ENST00000338995 ARHGAP5Q13017 1502 aa23.15■■□□□ 1.3
COMMD4-202ENST00000338995 ZNF518AQ6AHZ1 1483 aa23.15■■□□□ 1.3
COMMD4-202ENST00000338995 ESF1Q9H501 851 aaKnown RBP23.12■■□□□ 1.29
COMMD4-202ENST00000338995 CCDC18Q5T9S5 1454 aa23.08■■□□□ 1.29
COMMD4-202ENST00000338995 CASKIN1Q8WXD9 1431 aa23.08■■□□□ 1.28
COMMD4-202ENST00000338995 CEBPAP49715 358 aaPredicted RBP23.07■■□□□ 1.28
COMMD4-202ENST00000338995 DMRT2Q9Y5R5 561 aa23.07■■□□□ 1.28
COMMD4-202ENST00000338995 FER1L4A9Z1Z3 1794 aa23.06■■□□□ 1.28
COMMD4-202ENST00000338995 ARHGEF12Q9NZN5 1544 aa23.05■■□□□ 1.28
COMMD4-202ENST00000338995 SIGLEC1Q9BZZ2 1709 aa23.03■■□□□ 1.28
COMMD4-202ENST00000338995 CERKQ8TCT0 537 aa23.02■■□□□ 1.28
COMMD4-202ENST00000338995 MLH3Q9UHC1 1453 aa23.02■■□□□ 1.28
COMMD4-202ENST00000338995 ZNF777Q9ULD5 760 aaPredicted RBP23.01■■□□□ 1.27
COMMD4-202ENST00000338995 KDM5CP41229 1560 aa23.01■■□□□ 1.27
COMMD4-202ENST00000338995 SETD1BQ9UPS6 1966 aaKnown RBP23■■□□□ 1.27
COMMD4-202ENST00000338995 UHRF1BP1Q6BDS2 1440 aa22.96■■□□□ 1.27
COMMD4-202ENST00000338995 TRAPPC8Q9Y2L5 1435 aa22.96■■□□□ 1.27
COMMD4-202ENST00000338995 CDC42BPBQ9Y5S2 1711 aa22.96■■□□□ 1.27
COMMD4-202ENST00000338995 LRRIQ1Q96JM4 1722 aa22.94■■□□□ 1.26
COMMD4-202ENST00000338995 FYCO1Q9BQS8 1478 aa22.94■■□□□ 1.26
COMMD4-202ENST00000338995 REREQ9P2R6 1566 aa22.93■■□□□ 1.26
COMMD4-202ENST00000338995 DIP2CQ9Y2E4 1556 aa22.93■■□□□ 1.26
COMMD4-202ENST00000338995 SPAG9O60271 1321 aaKnown RBP22.92■■□□□ 1.26
COMMD4-202ENST00000338995 CFDP1Q9UEE9 299 aaPredicted RBP22.92■■□□□ 1.26
COMMD4-202ENST00000338995 PREX1Q8TCU6 1659 aa22.92■■□□□ 1.26
COMMD4-202ENST00000338995 PREX2Q70Z35 1606 aa22.92■■□□□ 1.26
COMMD4-202ENST00000338995 ABCC1P33527 1531 aa22.91■■□□□ 1.26
COMMD4-202ENST00000338995 AGLP35573 1532 aa22.91■■□□□ 1.26
COMMD4-202ENST00000338995 HNRNPMP52272 730 aaKnown RBP eCLIP22.9■■□□□ 1.26
COMMD4-202ENST00000338995 CNTLNQ9NXG0 1405 aa22.9■■□□□ 1.26
COMMD4-202ENST00000338995 CCNB3Q8WWL7 1395 aa22.87■■□□□ 1.25
COMMD4-202ENST00000338995 MTUS2Q5JR59 1369 aa22.86■■□□□ 1.25
COMMD4-202ENST00000338995 ABCA6Q8N139 1617 aa22.86■■□□□ 1.25
COMMD4-202ENST00000338995 GPATCH8Q9UKJ3 1502 aaKnown RBP22.85■■□□□ 1.25
COMMD4-202ENST00000338995 PLEKHH2Q8IVE3 1493 aa22.85■■□□□ 1.25
COMMD4-202ENST00000338995 ITSN2Q9NZM3 1697 aa22.84■■□□□ 1.25
COMMD4-202ENST00000338995 KIAA1107Q9UPP5 1409 aa22.83■■□□□ 1.25
COMMD4-202ENST00000338995 CDC42BPAQ5VT25 1732 aa22.83■■□□□ 1.25
COMMD4-202ENST00000338995 KIDINS220Q9ULH0 1771 aa22.81■■□□□ 1.24
COMMD4-202ENST00000338995 SAMD9LQ8IVG5 1584 aa22.8■■□□□ 1.24
COMMD4-202ENST00000338995 ZMYM3Q14202 1370 aa22.79■■□□□ 1.24
COMMD4-202ENST00000338995 PPP6R1Q9UPN7 881 aa22.79■■□□□ 1.24
COMMD4-202ENST00000338995 PTPRTO14522 1441 aa22.79■■□□□ 1.24
COMMD4-202ENST00000338995 C3P01024 1663 aa22.77■■□□□ 1.24
COMMD4-202ENST00000338995 GGT6Q6P531 493 aa22.77■■□□□ 1.24
COMMD4-202ENST00000338995 SYCP2Q9BX26 1530 aa22.77■■□□□ 1.24
COMMD4-202ENST00000338995 NPATQ14207 1427 aa22.75■■□□□ 1.23
COMMD4-202ENST00000338995 STRCQ7RTU9 1775 aa22.75■■□□□ 1.23
COMMD4-202ENST00000338995 A2MP01023 1474 aa22.73■■□□□ 1.23
COMMD4-202ENST00000338995 ATP7AQ04656 1500 aa22.71■■□□□ 1.23
COMMD4-202ENST00000338995 RSPH4AQ5TD94 716 aa22.7■■□□□ 1.22
COMMD4-202ENST00000338995 SUPT6HQ7KZ85 1726 aaKnown RBP22.68■■□□□ 1.22
COMMD4-202ENST00000338995 ZNF644Q9H582 1327 aaPredicted RBP22.68■■□□□ 1.22
COMMD4-202ENST00000338995 NCOA1Q15788 1441 aa22.67■■□□□ 1.22
COMMD4-202ENST00000338995 PKD2Q13563 968 aa22.67■■□□□ 1.22
COMMD4-202ENST00000338995 MROH2AA6NES4 1674 aa22.66■■□□□ 1.22
COMMD4-202ENST00000338995 RTEL1-TNFRSF6BF6WH68 1400 aa22.65■■□□□ 1.22
COMMD4-202ENST00000338995 CEP162Q5TB80 1403 aa22.64■■□□□ 1.21
COMMD4-202ENST00000338995 NCKAP5LQ9HCH0 1330 aa22.63■■□□□ 1.21
COMMD4-202ENST00000338995 EHBP1L1Q8N3D4 1523 aa22.62■■□□□ 1.21
COMMD4-202ENST00000338995 DHX29Q7Z478 1369 aaKnown RBP22.62■■□□□ 1.21
COMMD4-202ENST00000338995 CAMSAP1Q5T5Y3 1602 aa22.61■■□□□ 1.21
COMMD4-202ENST00000338995 TSPY4P0CV99 314 aa22.61■■□□□ 1.21
COMMD4-202ENST00000338995 TSPY10P0CW01 314 aa22.61■■□□□ 1.21
COMMD4-202ENST00000338995 INO80Q9ULG1 1556 aaPredicted RBP22.61■■□□□ 1.21
COMMD4-202ENST00000338995 KIF3BO15066 747 aa22.6■■□□□ 1.21
COMMD4-202ENST00000338995 MBD5Q9P267 1494 aa22.6■■□□□ 1.21
COMMD4-202ENST00000338995 PLXNC1O60486 1568 aa22.59■■□□□ 1.21
COMMD4-202ENST00000338995 PTPRKQ15262 1439 aa22.59■■□□□ 1.21
COMMD4-202ENST00000338995 IQSEC2Q5JU85 1478 aa22.58■■□□□ 1.2
COMMD4-202ENST00000338995 CLTCQ00610 1675 aaKnown RBP22.58■■□□□ 1.2
COMMD4-202ENST00000338995 ADGBQ8N7X0 1667 aa22.58■■□□□ 1.2
COMMD4-202ENST00000338995 DISP3Q9P2K9 1392 aa22.57■■□□□ 1.2
COMMD4-202ENST00000338995 TIAM1Q13009 1591 aa22.57■■□□□ 1.2
COMMD4-202ENST00000338995 WASHC2CQ9Y4E1 1318 aa22.55■■□□□ 1.2
COMMD4-202ENST00000338995 PLA2R1Q13018 1463 aa22.54■■□□□ 1.2
COMMD4-202ENST00000338995 LTBP4Q8N2S1 1624 aa22.54■■□□□ 1.2
COMMD4-202ENST00000338995 NCOA2Q15596 1464 aa22.52■■□□□ 1.2
COMMD4-202ENST00000338995 CCDC141Q6ZP82 1450 aa22.52■■□□□ 1.2
COMMD4-202ENST00000338995 ZNF335Q9H4Z2 1342 aaPredicted RBP22.52■■□□□ 1.2
COMMD4-202ENST00000338995 UBAP1LF5GYI3 381 aa22.51■■□□□ 1.19
COMMD4-202ENST00000338995 CEP170BQ9Y4F5 1589 aaPredicted RBP22.5■■□□□ 1.19
COMMD4-202ENST00000338995 FBXO31Q5XUX0 539 aaPredicted RBP22.48■■□□□ 1.19
COMMD4-202ENST00000338995 THEMISQ8N1K5 641 aaPredicted RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms