RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 UACAQ9BZF9 1416 aa12.7□□□□□ -0.38
FNDC3B-201ENST00000336824 PLEKHH2Q8IVE3 1493 aa12.7□□□□□ -0.38
FNDC3B-201ENST00000336824 PKD2Q13563 968 aa12.7□□□□□ -0.38
FNDC3B-201ENST00000336824 PCF11O94913 1555 aaKnown RBP12.69□□□□□ -0.38
FNDC3B-201ENST00000336824 TROQ12816 1431 aaPredicted RBP12.68□□□□□ -0.38
FNDC3B-201ENST00000336824 MPHOSPH9Q99550 1183 aa12.68□□□□□ -0.38
FNDC3B-201ENST00000336824 CARD11Q9BXL7 1154 aa12.68□□□□□ -0.38
FNDC3B-201ENST00000336824 C14orf37Q86TY3 774 aa12.68□□□□□ -0.38
FNDC3B-201ENST00000336824 KIF14Q15058 1648 aa12.68□□□□□ -0.38
FNDC3B-201ENST00000336824 EPRSP07814 1512 aaKnown RBP12.67□□□□□ -0.38
FNDC3B-201ENST00000336824 WASHC2CQ9Y4E1 1318 aa12.67□□□□□ -0.38
FNDC3B-201ENST00000336824 ABCA5Q8WWZ7 1642 aa12.66□□□□□ -0.38
FNDC3B-201ENST00000336824 DDX10Q13206 875 aaKnown RBP12.66□□□□□ -0.38
FNDC3B-201ENST00000336824 DCAF11Q8TEB1 546 aa12.65□□□□□ -0.39
FNDC3B-201ENST00000336824 MIA2Q96PC5 1412 aa12.64□□□□□ -0.39
FNDC3B-201ENST00000336824 SIN3AQ96ST3 1273 aa12.63□□□□□ -0.39
FNDC3B-201ENST00000336824 MAP3K1Q13233 1512 aa12.63□□□□□ -0.39
FNDC3B-201ENST00000336824 THOC2Q8NI27 1593 aaKnown RBP12.63□□□□□ -0.39
FNDC3B-201ENST00000336824 POGKQ9P215 609 aa12.62□□□□□ -0.39
FNDC3B-201ENST00000336824 RAPGEF6Q8TEU7 1601 aa12.62□□□□□ -0.39
FNDC3B-201ENST00000336824 PHLDB1Q86UU1 1377 aa12.61□□□□□ -0.39
FNDC3B-201ENST00000336824 TARBP1Q13395 1621 aaKnown RBP12.6□□□□□ -0.39
FNDC3B-201ENST00000336824 CDK13Q14004 1512 aaKnown RBP12.6□□□□□ -0.39
FNDC3B-201ENST00000336824 TMC1Q8TDI8 760 aa12.6□□□□□ -0.39
FNDC3B-201ENST00000336824 KIF15Q9NS87 1388 aa12.6□□□□□ -0.39
FNDC3B-201ENST00000336824 UGGT2Q9NYU1 1516 aa12.59□□□□□ -0.39
FNDC3B-201ENST00000336824 SENP3Q9H4L4 574 aaPredicted RBP12.58□□□□□ -0.4
FNDC3B-201ENST00000336824 ERICH6Q7L0X2 663 aa12.58□□□□□ -0.4
FNDC3B-201ENST00000336824 PLB1Q6P1J6 1458 aa12.58□□□□□ -0.4
FNDC3B-201ENST00000336824 ITSN2Q9NZM3 1697 aa12.58□□□□□ -0.4
FNDC3B-201ENST00000336824 CCDC144AA2RUR9 1427 aa12.58□□□□□ -0.4
FNDC3B-201ENST00000336824 KIAA0556O60303 1618 aa12.57□□□□□ -0.4
FNDC3B-201ENST00000336824 RRBP1Q9P2E9 1410 aaKnown RBP12.57□□□□□ -0.4
FNDC3B-201ENST00000336824 WDR43Q15061 677 aaKnown RBP eCLIP12.57□□□□□ -0.45e-7■■■□□ 16.8
FNDC3B-201ENST00000336824 EID1Q9Y6B2 187 aa12.56□□□□□ -0.4
FNDC3B-201ENST00000336824 KNSTRNQ9Y448 316 aa12.56□□□□□ -0.4
FNDC3B-201ENST00000336824 TMF1P82094 1093 aa12.55□□□□□ -0.4
FNDC3B-201ENST00000336824 FOXD1Q16676 465 aa12.55□□□□□ -0.4
FNDC3B-201ENST00000336824 EIF3AQ14152 1382 aaKnown RBP12.55□□□□□ -0.4
FNDC3B-201ENST00000336824 CANXP27824 592 aaKnown RBP12.54□□□□□ -0.4
FNDC3B-201ENST00000336824 ANKRD50Q9ULJ7 1429 aa12.54□□□□□ -0.4
FNDC3B-201ENST00000336824 ZNF644Q9H582 1327 aaPredicted RBP12.54□□□□□ -0.4
FNDC3B-201ENST00000336824 C9orf84Q5VXU9 1444 aa12.53□□□□□ -0.4
FNDC3B-201ENST00000336824 PTPN23Q9H3S7 1636 aa12.53□□□□□ -0.4
FNDC3B-201ENST00000336824 ROCK2O75116 1388 aaKnown RBP12.53□□□□□ -0.4
FNDC3B-201ENST00000336824 HIRIP3Q9BW71 556 aaPredicted RBP12.53□□□□□ -0.4
FNDC3B-201ENST00000336824 SCAF1Q9H7N4 1312 aaKnown RBP12.53□□□□□ -0.4
FNDC3B-201ENST00000336824 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.52□□□□□ -0.44e-15■□□□□ 8.2
FNDC3B-201ENST00000336824 ARHGEF11O15085 1522 aa12.5□□□□□ -0.41
FNDC3B-201ENST00000336824 CFAP53Q96M91 514 aa12.5□□□□□ -0.41
FNDC3B-201ENST00000336824 CD109Q6YHK3 1445 aa12.5□□□□□ -0.41
FNDC3B-201ENST00000336824 ZBTB47Q9UFB7 747 aaPredicted RBP12.5□□□□□ -0.41
FNDC3B-201ENST00000336824 CHD1O14646 1710 aa12.49□□□□□ -0.41
FNDC3B-201ENST00000336824 NUP160Q12769 1436 aa12.49□□□□□ -0.41
FNDC3B-201ENST00000336824 MRS2Q9HD23 443 aa12.49□□□□□ -0.41
FNDC3B-201ENST00000336824 CFAP43Q8NDM7 1665 aa12.49□□□□□ -0.41
FNDC3B-201ENST00000336824 FAM9BQ8IZU0 186 aa12.49□□□□□ -0.41
FNDC3B-201ENST00000336824 CCDC141Q6ZP82 1450 aa12.48□□□□□ -0.41
FNDC3B-201ENST00000336824 DAPK1P53355 1430 aa12.47□□□□□ -0.41
FNDC3B-201ENST00000336824 HAP1P54257 671 aaPredicted RBP12.47□□□□□ -0.41
FNDC3B-201ENST00000336824 CAMSAP2Q08AD1 1489 aa12.47□□□□□ -0.41
FNDC3B-201ENST00000336824 DHX57Q6P158 1386 aaKnown RBP12.47□□□□□ -0.41
FNDC3B-201ENST00000336824 AFAP1Q8N556 730 aa12.47□□□□□ -0.41
FNDC3B-201ENST00000336824 SRPK2P78362 688 aaKnown RBP12.46□□□□□ -0.41
FNDC3B-201ENST00000336824 SCAPERQ9BY12 1400 aa12.46□□□□□ -0.41
FNDC3B-201ENST00000336824 HNRNPUQ00839 825 aaKnown RBP eCLIP12.46□□□□□ -0.412e-7■□□□□ 9.9
FNDC3B-201ENST00000336824 DAXXQ9UER7 740 aaPredicted RBP12.46□□□□□ -0.42
FNDC3B-201ENST00000336824 STAC3Q96MF2 364 aa12.46□□□□□ -0.42
FNDC3B-201ENST00000336824 VGFO15240 615 aaPredicted RBP12.45□□□□□ -0.42
FNDC3B-201ENST00000336824 POGZQ7Z3K3 1410 aa12.44□□□□□ -0.42
FNDC3B-201ENST00000336824 CEP170Q5SW79 1584 aa12.44□□□□□ -0.42
FNDC3B-201ENST00000336824 L3MBTL2Q969R5 705 aa12.43□□□□□ -0.42
FNDC3B-201ENST00000336824 ADGRL1O94910 1474 aa12.43□□□□□ -0.42
FNDC3B-201ENST00000336824 STK26Q9P289 416 aa12.43□□□□□ -0.42
FNDC3B-201ENST00000336824 ROCK1Q13464 1354 aa12.43□□□□□ -0.42
FNDC3B-201ENST00000336824 HFM1A2PYH4 1435 aa12.42□□□□□ -0.42
FNDC3B-201ENST00000336824 SAMD9Q5K651 1589 aa12.41□□□□□ -0.42
FNDC3B-201ENST00000336824 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.41□□□□□ -0.42
FNDC3B-201ENST00000336824 TEX14Q8IWB6 1497 aa12.41□□□□□ -0.42
FNDC3B-201ENST00000336824 FANCAO15360 1455 aa12.41□□□□□ -0.42
FNDC3B-201ENST00000336824 ATP10BO94823 1461 aa12.41□□□□□ -0.42
FNDC3B-201ENST00000336824 HDGFL2Q7Z4V5 671 aaPredicted RBP12.4□□□□□ -0.42
FNDC3B-201ENST00000336824 WDR7Q9Y4E6 1490 aa12.4□□□□□ -0.42
FNDC3B-201ENST00000336824 ABCC2Q92887 1545 aa12.4□□□□□ -0.42
FNDC3B-201ENST00000336824 HSPA5P11021 654 aaKnown RBP12.4□□□□□ -0.42
FNDC3B-201ENST00000336824 ZBTB7CA1YPR0 619 aa12.4□□□□□ -0.43
FNDC3B-201ENST00000336824 NUDCQ9Y266 331 aa12.4□□□□□ -0.43
FNDC3B-201ENST00000336824 NUP153P49790 1475 aaKnown RBP12.4□□□□□ -0.43
FNDC3B-201ENST00000336824 ASXL2Q76L83 1435 aa12.39□□□□□ -0.43
FNDC3B-201ENST00000336824 PNNQ9H307 717 aaKnown RBP12.38□□□□□ -0.43
FNDC3B-201ENST00000336824 SAFB2Q14151 953 aaKnown RBP eCLIP12.38□□□□□ -0.43
FNDC3B-201ENST00000336824 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.38□□□□□ -0.43
FNDC3B-201ENST00000336824 LMOD2Q6P5Q4 547 aa12.37□□□□□ -0.43
FNDC3B-201ENST00000336824 DENND4BO75064 1496 aaPredicted RBP12.36□□□□□ -0.43
FNDC3B-201ENST00000336824 DISP1Q96F81 1524 aa12.36□□□□□ -0.43
FNDC3B-201ENST00000336824 PPM1GO15355 546 aaPredicted RBP12.36□□□□□ -0.43
FNDC3B-201ENST00000336824 RAPGEF3O95398 923 aa12.36□□□□□ -0.43
FNDC3B-201ENST00000336824 MIER1Q8N108 512 aa12.35□□□□□ -0.43
FNDC3B-201ENST00000336824 KIAA1107Q9UPP5 1409 aa12.34□□□□□ -0.43
FNDC3B-201ENST00000336824 GPATCH8Q9UKJ3 1502 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms