RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 URB2Q14146 1524 aaKnown RBP9.68□□□□□ -0.86
EPHA3-201ENST00000336596 MAPK8IP3Q9UPT6 1336 aa9.67□□□□□ -0.86
EPHA3-201ENST00000336596 SIN3AQ96ST3 1273 aa9.66□□□□□ -0.86
EPHA3-201ENST00000336596 PRXQ9BXM0 1461 aa9.66□□□□□ -0.86
EPHA3-201ENST00000336596 KIF3BO15066 747 aa9.66□□□□□ -0.86
EPHA3-201ENST00000336596 KNSTRNQ9Y448 316 aa9.66□□□□□ -0.86
EPHA3-201ENST00000336596 EIF3AQ14152 1382 aaKnown RBP9.66□□□□□ -0.86
EPHA3-201ENST00000336596 HIRIP3Q9BW71 556 aaPredicted RBP9.65□□□□□ -0.86
EPHA3-201ENST00000336596 MS4A1P11836 297 aa9.64□□□□□ -0.87
EPHA3-201ENST00000336596 FAM69CQ0P6D2 419 aa9.64□□□□□ -0.87
EPHA3-201ENST00000336596 PKD2Q13563 968 aa9.64□□□□□ -0.87
EPHA3-201ENST00000336596 HDGFL2Q7Z4V5 671 aaPredicted RBP9.64□□□□□ -0.87
EPHA3-201ENST00000336596 NUP155O75694 1391 aa9.64□□□□□ -0.87
EPHA3-201ENST00000336596 ANP32BQ92688 251 aaKnown RBP9.64□□□□□ -0.87
EPHA3-201ENST00000336596 CARD11Q9BXL7 1154 aa9.64□□□□□ -0.87
EPHA3-201ENST00000336596 UACAQ9BZF9 1416 aa9.63□□□□□ -0.87
EPHA3-201ENST00000336596 HSP90AA1P07900 732 aaKnown RBP9.63□□□□□ -0.87
EPHA3-201ENST00000336596 ANO8Q9HCE9 1232 aaPredicted RBP9.63□□□□□ -0.87
EPHA3-201ENST00000336596 CASC1Q6TDU7 716 aa9.62□□□□□ -0.87
EPHA3-201ENST00000336596 GOLGA2Q08379 1002 aa9.62□□□□□ -0.87
EPHA3-201ENST00000336596 ARXQ96QS3 562 aa9.62□□□□□ -0.87
EPHA3-201ENST00000336596 SYNJ2O15056 1496 aa9.62□□□□□ -0.87
EPHA3-201ENST00000336596 DCAF11Q8TEB1 546 aa9.62□□□□□ -0.87
EPHA3-201ENST00000336596 RAB3GAP2Q9H2M9 1393 aa9.61□□□□□ -0.87
EPHA3-201ENST00000336596 CASKIN1Q8WXD9 1431 aa9.61□□□□□ -0.87
EPHA3-201ENST00000336596 MAGI1Q96QZ7 1491 aaPredicted RBP9.61□□□□□ -0.87
EPHA3-201ENST00000336596 EFCAB5A4FU69 1503 aa9.61□□□□□ -0.87
EPHA3-201ENST00000336596 MEX3CQ5U5Q3 659 aaKnown RBP9.61□□□□□ -0.87
EPHA3-201ENST00000336596 KIAA0586Q9BVV6 1533 aa9.61□□□□□ -0.87
EPHA3-201ENST00000336596 MPHOSPH9Q99550 1183 aa9.6□□□□□ -0.87
EPHA3-201ENST00000336596 ZNF608Q9ULD9 1512 aaPredicted RBP9.6□□□□□ -0.87
EPHA3-201ENST00000336596 CUL7Q14999 1698 aa9.6□□□□□ -0.87
EPHA3-201ENST00000336596 WASHC2CQ9Y4E1 1318 aa9.6□□□□□ -0.87
EPHA3-201ENST00000336596 WASHC2AQ641Q2 1341 aa9.59□□□□□ -0.87
EPHA3-201ENST00000336596 HDAC5Q9UQL6 1122 aa9.59□□□□□ -0.87
EPHA3-201ENST00000336596 CALD1Q05682 793 aaKnown RBP9.59□□□□□ -0.87
EPHA3-201ENST00000336596 CCDC9Q9Y3X0 531 aaKnown RBP9.59□□□□□ -0.87
EPHA3-201ENST00000336596 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.59□□□□□ -0.87
EPHA3-201ENST00000336596 TMF1P82094 1093 aa9.58□□□□□ -0.88
EPHA3-201ENST00000336596 BIVM-ERCC5R4GMW8 1640 aa9.58□□□□□ -0.88
EPHA3-201ENST00000336596 CSB-PGBD3P0DP91 1061 aa9.58□□□□□ -0.88
EPHA3-201ENST00000336596 ARAP1Q96P48 1450 aa9.58□□□□□ -0.88
EPHA3-201ENST00000336596 BCL11AQ9H165 835 aa9.58□□□□□ -0.88
EPHA3-201ENST00000336596 GRIN2AQ12879 1464 aa9.58□□□□□ -0.88
EPHA3-201ENST00000336596 FYCO1Q9BQS8 1478 aa9.58□□□□□ -0.88
EPHA3-201ENST00000336596 CFAP44Q96MT7 982 aa9.57□□□□□ -0.88
EPHA3-201ENST00000336596 POGZQ7Z3K3 1410 aa9.57□□□□□ -0.88
EPHA3-201ENST00000336596 IQGAP2Q13576 1575 aa9.57□□□□□ -0.88
EPHA3-201ENST00000336596 PLEKHG5O94827 1062 aa9.57□□□□□ -0.88
EPHA3-201ENST00000336596 FAM9BQ8IZU0 186 aa9.56□□□□□ -0.88
EPHA3-201ENST00000336596 MYOM3Q5VTT5 1437 aa9.56□□□□□ -0.88
EPHA3-201ENST00000336596 LRRC9Q6ZRR7 1453 aa9.56□□□□□ -0.88
EPHA3-201ENST00000336596 ANP32AP39687 249 aaKnown RBP9.56□□□□□ -0.88
EPHA3-201ENST00000336596 TIMELESSQ9UNS1 1208 aa9.56□□□□□ -0.88
EPHA3-201ENST00000336596 SRPK2P78362 688 aaKnown RBP9.55□□□□□ -0.88
EPHA3-201ENST00000336596 RTF1Q92541 710 aaKnown RBP9.55□□□□□ -0.88
EPHA3-201ENST00000336596 FGD6Q6ZV73 1430 aa9.54□□□□□ -0.88
EPHA3-201ENST00000336596 ZNF644Q9H582 1327 aaPredicted RBP9.53□□□□□ -0.88
EPHA3-201ENST00000336596 NCOA2Q15596 1464 aa9.53□□□□□ -0.88
EPHA3-201ENST00000336596 MRS2Q9HD23 443 aa9.53□□□□□ -0.88
EPHA3-201ENST00000336596 ARHGAP5Q13017 1502 aa9.53□□□□□ -0.88
EPHA3-201ENST00000336596 HECW1Q76N89 1606 aa9.52□□□□□ -0.89
EPHA3-201ENST00000336596 KIF21AQ7Z4S6 1674 aa9.52□□□□□ -0.89
EPHA3-201ENST00000336596 HNRNPUQ00839 825 aaKnown RBP eCLIP9.51□□□□□ -0.89
EPHA3-201ENST00000336596 PHLDB1Q86UU1 1377 aa9.51□□□□□ -0.89
EPHA3-201ENST00000336596 PPM1GO15355 546 aaPredicted RBP9.51□□□□□ -0.89
EPHA3-201ENST00000336596 SALL2Q9Y467 1007 aaPredicted RBP9.51□□□□□ -0.89
EPHA3-201ENST00000336596 TERF2IPQ9NYB0 399 aa9.51□□□□□ -0.89
EPHA3-201ENST00000336596 STK26Q9P289 416 aa9.5□□□□□ -0.89
EPHA3-201ENST00000336596 TROQ12816 1431 aaPredicted RBP9.5□□□□□ -0.89
EPHA3-201ENST00000336596 NCLP19338 710 aaKnown RBP9.5□□□□□ -0.89
EPHA3-201ENST00000336596 SAFB2Q14151 953 aaKnown RBP eCLIP9.5□□□□□ -0.89
EPHA3-201ENST00000336596 G3V3G9 751 aa9.49□□□□□ -0.89
EPHA3-201ENST00000336596 DCAF8Q5TAQ9 597 aa9.49□□□□□ -0.89
EPHA3-201ENST00000336596 KIF15Q9NS87 1388 aa9.49□□□□□ -0.89
EPHA3-201ENST00000336596 EHBP1L1Q8N3D4 1523 aa9.48□□□□□ -0.89
EPHA3-201ENST00000336596 PAK3O75914 559 aaPredicted RBP9.48□□□□□ -0.89
EPHA3-201ENST00000336596 OS9Q13438 667 aaPredicted RBP9.48□□□□□ -0.89
EPHA3-201ENST00000336596 AFAP1Q8N556 730 aa9.48□□□□□ -0.89
EPHA3-201ENST00000336596 FTSJ3Q8IY81 847 aaKnown RBP9.47□□□□□ -0.89
EPHA3-201ENST00000336596 ZRSR1Q15695 479 aaKnown RBP9.47□□□□□ -0.89
EPHA3-201ENST00000336596 CCDC144AA2RUR9 1427 aa9.47□□□□□ -0.89
EPHA3-201ENST00000336596 SF3B2Q13435 895 aaKnown RBP9.46□□□□□ -0.89
EPHA3-201ENST00000336596 PHF23Q9BUL5 403 aaPredicted RBP9.46□□□□□ -0.89
EPHA3-201ENST00000336596 ROCK2O75116 1388 aaKnown RBP9.46□□□□□ -0.89
EPHA3-201ENST00000336596 STAC3Q96MF2 364 aa9.46□□□□□ -0.89
EPHA3-201ENST00000336596 LMOD3Q0VAK6 560 aa9.46□□□□□ -0.9
EPHA3-201ENST00000336596 NUTM2DQ5VT03 806 aaPredicted RBP9.46□□□□□ -0.9
EPHA3-201ENST00000336596 NGDNQ8NEJ9 315 aaKnown RBP9.46□□□□□ -0.9
EPHA3-201ENST00000336596 EPRSP07814 1512 aaKnown RBP9.45□□□□□ -0.9
EPHA3-201ENST00000336596 PLB1Q6P1J6 1458 aa9.45□□□□□ -0.9
EPHA3-201ENST00000336596 CDK13Q14004 1512 aaKnown RBP9.45□□□□□ -0.9
EPHA3-201ENST00000336596 VGFO15240 615 aaPredicted RBP9.45□□□□□ -0.9
EPHA3-201ENST00000336596 L3MBTL2Q969R5 705 aa9.45□□□□□ -0.9
EPHA3-201ENST00000336596 EVA1CP58658 441 aa9.45□□□□□ -0.9
EPHA3-201ENST00000336596 MORC1Q86VD1 984 aa9.45□□□□□ -0.9
EPHA3-201ENST00000336596 PLEKHH2Q8IVE3 1493 aa9.45□□□□□ -0.9
EPHA3-201ENST00000336596 WDR62O43379 1518 aa9.44□□□□□ -0.9
EPHA3-201ENST00000336596 ATF3P18847 181 aa9.44□□□□□ -0.9
EPHA3-201ENST00000336596 TIAM1Q13009 1591 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms