RNA–Protein interactions for RNA: ENST00000334318.10

PTBP3-202, Transcript of polypyrimidine tract binding protein 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP3, Length 7,990 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-202ENST00000334318 G3V3G9 751 aa8.29□□□□□ -1.08
PTBP3-202ENST00000334318 DCAF8Q5TAQ9 597 aa8.29□□□□□ -1.08
PTBP3-202ENST00000334318 WDR43Q15061 677 aaKnown RBP eCLIP8.29□□□□□ -1.08
PTBP3-202ENST00000334318 STRN4Q9NRL3 753 aa8.29□□□□□ -1.08
PTBP3-202ENST00000334318 ADAMTS2O95450 1211 aa8.29□□□□□ -1.08
PTBP3-202ENST00000334318 EIF4G2P78344 907 aaKnown RBP eCLIP8.29□□□□□ -1.083e-6■■■□□ 14.7
PTBP3-202ENST00000334318 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.28□□□□□ -1.085e-7■■□□□ 13.5
PTBP3-202ENST00000334318 TMX4Q9H1E5 349 aaPredicted RBP8.28□□□□□ -1.08
PTBP3-202ENST00000334318 NCBP3Q53F19 620 aaKnown RBP8.28□□□□□ -1.08
PTBP3-202ENST00000334318 XPCQ01831 940 aaPredicted RBP8.28□□□□□ -1.08
PTBP3-202ENST00000334318 BAZ1AQ9NRL2 1556 aaPredicted RBP8.28□□□□□ -1.08
PTBP3-202ENST00000334318 CARD11Q9BXL7 1154 aa8.28□□□□□ -1.08
PTBP3-202ENST00000334318 MROH2BQ7Z745 1585 aa8.27□□□□□ -1.09
PTBP3-202ENST00000334318 AMER1Q5JTC6 1135 aaPredicted RBP8.27□□□□□ -1.09
PTBP3-202ENST00000334318 ATAD2BQ9ULI0 1458 aa8.26□□□□□ -1.09
PTBP3-202ENST00000334318 GTF2E1P29083 439 aaPredicted RBP8.26□□□□□ -1.09
PTBP3-202ENST00000334318 CCDC88BA6NC98 1476 aa8.26□□□□□ -1.09
PTBP3-202ENST00000334318 PSME1Q06323 249 aa8.25□□□□□ -1.09
PTBP3-202ENST00000334318 GOLGA2Q08379 1002 aa8.25□□□□□ -1.09
PTBP3-202ENST00000334318 CC2D1BQ5T0F9 858 aaKnown RBP8.25□□□□□ -1.09
PTBP3-202ENST00000334318 SIN3AQ96ST3 1273 aa8.25□□□□□ -1.09
PTBP3-202ENST00000334318 CFAP44Q96MT7 982 aa8.25□□□□□ -1.09
PTBP3-202ENST00000334318 WWC3Q9ULE0 1092 aa8.25□□□□□ -1.09
PTBP3-202ENST00000334318 TRAK1Q9UPV9 953 aa8.24□□□□□ -1.09
PTBP3-202ENST00000334318 TXNDC2Q86VQ3 553 aa8.24□□□□□ -1.09
PTBP3-202ENST00000334318 PKD2Q13563 968 aa8.23□□□□□ -1.09
PTBP3-202ENST00000334318 AFAP1Q8N556 730 aa8.23□□□□□ -1.09
PTBP3-202ENST00000334318 ESCO1Q5FWF5 840 aa8.23□□□□□ -1.09
PTBP3-202ENST00000334318 SLC26A8Q96RN1 970 aa8.22□□□□□ -1.09
PTBP3-202ENST00000334318 CC2D2AQ9P2K1 1620 aa8.22□□□□□ -1.09
PTBP3-202ENST00000334318 FBXW7Q969H0 707 aa8.22□□□□□ -1.09
PTBP3-202ENST00000334318 FHOD3Q2V2M9 1422 aa8.22□□□□□ -1.09
PTBP3-202ENST00000334318 NBR1Q14596 966 aa8.22□□□□□ -1.09
PTBP3-202ENST00000334318 NGEFQ8N5V2 710 aa8.22□□□□□ -1.09
PTBP3-202ENST00000334318 PRG4Q92954 1404 aaPredicted RBP8.22□□□□□ -1.09
PTBP3-202ENST00000334318 MINK1Q8N4C8 1332 aaPredicted RBP8.21□□□□□ -1.09
PTBP3-202ENST00000334318 AMPHP49418 695 aa8.21□□□□□ -1.1
PTBP3-202ENST00000334318 KNSTRNQ9Y448 316 aa8.2□□□□□ -1.1
PTBP3-202ENST00000334318 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.2□□□□□ -1.1
PTBP3-202ENST00000334318 ABCC8Q09428 1581 aa8.2□□□□□ -1.1
PTBP3-202ENST00000334318 UPF2Q9HAU5 1272 aaKnown RBP8.19□□□□□ -1.1
PTBP3-202ENST00000334318 SUPT16HQ9Y5B9 1047 aaKnown RBP8.19□□□□□ -1.1
PTBP3-202ENST00000334318 HDGFL2Q7Z4V5 671 aaPredicted RBP8.19□□□□□ -1.1
PTBP3-202ENST00000334318 MAPK8IP3Q9UPT6 1336 aa8.19□□□□□ -1.1
PTBP3-202ENST00000334318 PAXIP1Q6ZW49 1069 aaPredicted RBP8.19□□□□□ -1.1
PTBP3-202ENST00000334318 CFAP53Q96M91 514 aa8.19□□□□□ -1.1
PTBP3-202ENST00000334318 FAM177BA6PVY3 158 aa8.18□□□□□ -1.1
PTBP3-202ENST00000334318 HSP90AA1P07900 732 aaKnown RBP8.18□□□□□ -1.1
PTBP3-202ENST00000334318 NGLY1Q96IV0 654 aa8.18□□□□□ -1.1
PTBP3-202ENST00000334318 CHMP3Q9Y3E7 222 aa8.17□□□□□ -1.1
PTBP3-202ENST00000334318 NUP155O75694 1391 aa8.17□□□□□ -1.1
PTBP3-202ENST00000334318 GRM1Q13255 1194 aa8.16□□□□□ -1.1
PTBP3-202ENST00000334318 PMFBP1Q8TBY8 1022 aa8.16□□□□□ -1.1
PTBP3-202ENST00000334318 NLRP2Q9NX02 1062 aa8.16□□□□□ -1.1
PTBP3-202ENST00000334318 RTF1Q92541 710 aaKnown RBP8.16□□□□□ -1.1
PTBP3-202ENST00000334318 OS9Q13438 667 aaPredicted RBP8.16□□□□□ -1.1
PTBP3-202ENST00000334318 ANKLE2Q86XL3 938 aa8.16□□□□□ -1.1
PTBP3-202ENST00000334318 EIF5BO60841 1220 aaKnown RBP8.15□□□□□ -1.1
PTBP3-202ENST00000334318 TPRNQ4KMQ1 711 aa8.14□□□□□ -1.11
PTBP3-202ENST00000334318 KANK4Q5T7N3 995 aaPredicted RBP8.14□□□□□ -1.11
PTBP3-202ENST00000334318 MRC2Q9UBG0 1479 aa8.14□□□□□ -1.11
PTBP3-202ENST00000334318 MORC1Q86VD1 984 aa8.14□□□□□ -1.11
PTBP3-202ENST00000334318 TCERG1O14776 1098 aaKnown RBP8.13□□□□□ -1.11
PTBP3-202ENST00000334318 ZNF428Q96B54 188 aa8.13□□□□□ -1.11
PTBP3-202ENST00000334318 GAPVD1Q14C86 1478 aa8.13□□□□□ -1.11
PTBP3-202ENST00000334318 PDE3BQ13370 1112 aa8.12□□□□□ -1.11
PTBP3-202ENST00000334318 SAMD1Q6SPF0 538 aaPredicted RBP8.12□□□□□ -1.11
PTBP3-202ENST00000334318 NUDCQ9Y266 331 aa8.12□□□□□ -1.11
PTBP3-202ENST00000334318 C8orf37Q96NL8 207 aa8.12□□□□□ -1.11
PTBP3-202ENST00000334318 ZNF644Q9H582 1327 aaPredicted RBP8.12□□□□□ -1.11
PTBP3-202ENST00000334318 FRAT2O75474 233 aaPredicted RBP8.12□□□□□ -1.11
PTBP3-202ENST00000334318 DDX54Q8TDD1 881 aaKnown RBP8.12□□□□□ -1.11
PTBP3-202ENST00000334318 CLSTN1O94985 981 aa8.11□□□□□ -1.11
PTBP3-202ENST00000334318 THEMISQ8N1K5 641 aaPredicted RBP8.11□□□□□ -1.11
PTBP3-202ENST00000334318 ZNF219Q9P2Y4 722 aaPredicted RBP8.11□□□□□ -1.11
PTBP3-202ENST00000334318 VPS8Q8N3P4 1428 aa8.11□□□□□ -1.11
PTBP3-202ENST00000334318 RBM42Q9BTD8 480 aaKnown RBP8.11□□□□□ -1.11
PTBP3-202ENST00000334318 TMEM132EQ6IEE7 984 aa8.11□□□□□ -1.11
PTBP3-202ENST00000334318 ANP32BQ92688 251 aaKnown RBP8.11□□□□□ -1.11
PTBP3-202ENST00000334318 DNAJC5Q9H3Z4 198 aa8.11□□□□□ -1.11
PTBP3-202ENST00000334318 ANP32EQ9BTT0 268 aa8.1□□□□□ -1.11
PTBP3-202ENST00000334318 FGD5Q6ZNL6 1462 aa8.1□□□□□ -1.11
PTBP3-202ENST00000334318 TIMELESSQ9UNS1 1208 aa8.1□□□□□ -1.11
PTBP3-202ENST00000334318 SNAPC4Q5SXM2 1469 aa8.1□□□□□ -1.11
PTBP3-202ENST00000334318 APBB1O00213 710 aa8.1□□□□□ -1.11
PTBP3-202ENST00000334318 RAD21O60216 631 aa8.1□□□□□ -1.11
PTBP3-202ENST00000334318 PPP4R2Q9NY27 417 aa8.1□□□□□ -1.11
PTBP3-202ENST00000334318 TOM1O60784 492 aa8.09□□□□□ -1.11
PTBP3-202ENST00000334318 PPP6R1Q9UPN7 881 aa8.09□□□□□ -1.11
PTBP3-202ENST00000334318 NAP1L2Q9ULW6 460 aaPredicted RBP8.09□□□□□ -1.11
PTBP3-202ENST00000334318 MYH16Q9H6N6 1097 aa8.08□□□□□ -1.12
PTBP3-202ENST00000334318 CDCA8Q53HL2 280 aa8.08□□□□□ -1.12
PTBP3-202ENST00000334318 TAF7LQ5H9L4 462 aa8.08□□□□□ -1.12
PTBP3-202ENST00000334318 FHAD1B1AJZ9 1412 aa8.08□□□□□ -1.12
PTBP3-202ENST00000334318 WIZO95785 1651 aa8.08□□□□□ -1.12
PTBP3-202ENST00000334318 ZC3H6P61129 1189 aaKnown RBP8.08□□□□□ -1.12
PTBP3-202ENST00000334318 DMRT2Q9Y5R5 561 aa8.08□□□□□ -1.12
PTBP3-202ENST00000334318 TOM1L2Q6ZVM7 507 aa8.08□□□□□ -1.12
PTBP3-202ENST00000334318 NECTIN2Q92692 538 aa8.08□□□□□ -1.12
PTBP3-202ENST00000334318 B4GALNT3Q6L9W6 998 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms