RNA–Protein interactions for RNA: ENST00000334186.8

PPFIA3-201, Transcript of PTPRF interacting protein alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPFIA3, Length 4,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-201ENST00000334186 NUDCQ9Y266 331 aa21.34■■□□□ 1.01
PPFIA3-201ENST00000334186 FTSJ3Q8IY81 847 aaKnown RBP21.33■■□□□ 1
PPFIA3-201ENST00000334186 MAPK8IP3Q9UPT6 1336 aa21.32■■□□□ 1
PPFIA3-201ENST00000334186 AQRO60306 1485 aaKnown RBP eCLIP21.32■■□□□ 13e-9■■■■■ 38.1
PPFIA3-201ENST00000334186 TNNT2P45379 298 aaPredicted RBP21.31■■□□□ 1
PPFIA3-201ENST00000334186 POGKQ9P215 609 aa21.3■■□□□ 1
PPFIA3-201ENST00000334186 KANK1Q14678 1352 aa21.3■■□□□ 1
PPFIA3-201ENST00000334186 C14orf37Q86TY3 774 aa21.29■■□□□ 1
PPFIA3-201ENST00000334186 IPO9Q96P70 1041 aaKnown RBP21.27■■□□□ 1
PPFIA3-201ENST00000334186 FRAT1Q92837 279 aaPredicted RBP21.27■□□□□ 0.99
PPFIA3-201ENST00000334186 UNC13AQ9UPW8 1703 aa21.26■□□□□ 0.99
PPFIA3-201ENST00000334186 NUP155O75694 1391 aa21.26■□□□□ 0.99
PPFIA3-201ENST00000334186 DHX57Q6P158 1386 aaKnown RBP21.25■□□□□ 0.99
PPFIA3-201ENST00000334186 ANKRD30AQ9BXX3 1397 aa21.25■□□□□ 0.99
PPFIA3-201ENST00000334186 ZBTB7CA1YPR0 619 aa21.24■□□□□ 0.99
PPFIA3-201ENST00000334186 ARID4BQ4LE39 1312 aaPredicted RBP21.23■□□□□ 0.99
PPFIA3-201ENST00000334186 CUX1P39880 1505 aa21.23■□□□□ 0.99
PPFIA3-201ENST00000334186 NCLP19338 710 aaKnown RBP21.23■□□□□ 0.99
PPFIA3-201ENST00000334186 L1TD1Q5T7N2 865 aaKnown RBP21.23■□□□□ 0.99
PPFIA3-201ENST00000334186 L3MBTL2Q969R5 705 aa21.23■□□□□ 0.99
PPFIA3-201ENST00000334186 KTN1Q86UP2 1357 aaKnown RBP21.21■□□□□ 0.99
PPFIA3-201ENST00000334186 U2SURPO15042 1029 aaKnown RBP21.2■□□□□ 0.98
PPFIA3-201ENST00000334186 PLEKHG5O94827 1062 aa21.2■□□□□ 0.98
PPFIA3-201ENST00000334186 PTMAP06454 111 aaKnown RBP21.19■□□□□ 0.98
PPFIA3-201ENST00000334186 TCERG1O14776 1098 aaKnown RBP21.18■□□□□ 0.98
PPFIA3-201ENST00000334186 MS4A1P11836 297 aa21.18■□□□□ 0.98
PPFIA3-201ENST00000334186 DNTTIP2Q5QJE6 756 aaKnown RBP21.18■□□□□ 0.98
PPFIA3-201ENST00000334186 FANCIQ9NVI1 1328 aa21.17■□□□□ 0.98
PPFIA3-201ENST00000334186 ROCK2O75116 1388 aaKnown RBP21.17■□□□□ 0.98
PPFIA3-201ENST00000334186 HNRNPMP52272 730 aaKnown RBP eCLIP21.15■□□□□ 0.98
PPFIA3-201ENST00000334186 RALBP1Q15311 655 aa21.15■□□□□ 0.98
PPFIA3-201ENST00000334186 EFCAB2Q5VUJ9 269 aa21.15■□□□□ 0.98
PPFIA3-201ENST00000334186 TOP2BQ02880 1626 aa21.15■□□□□ 0.98
PPFIA3-201ENST00000334186 TOPBP1Q92547 1522 aa21.15■□□□□ 0.98
PPFIA3-201ENST00000334186 MORC1Q86VD1 984 aa21.14■□□□□ 0.98
PPFIA3-201ENST00000334186 CCDC18Q5T9S5 1454 aa21.14■□□□□ 0.98
PPFIA3-201ENST00000334186 KIF21BO75037 1637 aa21.14■□□□□ 0.97
PPFIA3-201ENST00000334186 PNNQ9H307 717 aaKnown RBP21.13■□□□□ 0.97
PPFIA3-201ENST00000334186 POLA1P09884 1462 aaPredicted RBP21.13■□□□□ 0.97
PPFIA3-201ENST00000334186 CHMP4BQ9H444 224 aaKnown RBP21.13■□□□□ 0.97
PPFIA3-201ENST00000334186 SRPK2P78362 688 aaKnown RBP21.11■□□□□ 0.97
PPFIA3-201ENST00000334186 GGT6Q6P531 493 aa21.11■□□□□ 0.97
PPFIA3-201ENST00000334186 CASC1Q6TDU7 716 aa21.1■□□□□ 0.97
PPFIA3-201ENST00000334186 PRXQ9BXM0 1461 aa21.09■□□□□ 0.97
PPFIA3-201ENST00000334186 PTPRGP23470 1445 aa21.08■□□□□ 0.97
PPFIA3-201ENST00000334186 USP35Q9P2H5 1018 aa21.08■□□□□ 0.96
PPFIA3-201ENST00000334186 RCAN3Q9UKA8 241 aa21.08■□□□□ 0.96
PPFIA3-201ENST00000334186 ARAP1Q96P48 1450 aa21.08■□□□□ 0.96
PPFIA3-201ENST00000334186 RSPH4AQ5TD94 716 aa21.07■□□□□ 0.96
PPFIA3-201ENST00000334186 SAFB2Q14151 953 aaKnown RBP eCLIP21.06■□□□□ 0.96
PPFIA3-201ENST00000334186 PEG3Q9GZU2 1588 aa21.05■□□□□ 0.96
PPFIA3-201ENST00000334186 GRIN2BQ13224 1484 aa21.02■□□□□ 0.96
PPFIA3-201ENST00000334186 A0A0G2JS52 829 aa21.02■□□□□ 0.96
PPFIA3-201ENST00000334186 MRC2Q9UBG0 1479 aa21.02■□□□□ 0.95
PPFIA3-201ENST00000334186 HSP90AB1P08238 724 aaKnown RBP21.02■□□□□ 0.95
PPFIA3-201ENST00000334186 MLECQ14165 292 aa21.02■□□□□ 0.95
PPFIA3-201ENST00000334186 ERICH3Q5RHP9 1530 aa21.01■□□□□ 0.95
PPFIA3-201ENST00000334186 NLRP13Q86W25 1043 aa21.01■□□□□ 0.95
PPFIA3-201ENST00000334186 MSNP26038 577 aaKnown RBP21■□□□□ 0.95
PPFIA3-201ENST00000334186 HDGFP51858 240 aaKnown RBP21■□□□□ 0.95
PPFIA3-201ENST00000334186 SLKQ9H2G2 1235 aaPredicted RBP20.99■□□□□ 0.95
PPFIA3-201ENST00000334186 SPRYD3Q8NCJ5 442 aa20.98■□□□□ 0.95
PPFIA3-201ENST00000334186 STK26Q9P289 416 aa20.98■□□□□ 0.95
PPFIA3-201ENST00000334186 HSCBQ8IWL3 235 aa20.98■□□□□ 0.95
PPFIA3-201ENST00000334186 KIF3BO15066 747 aa20.98■□□□□ 0.95
PPFIA3-201ENST00000334186 PHLDB1Q86UU1 1377 aa20.98■□□□□ 0.95
PPFIA3-201ENST00000334186 ZNF644Q9H582 1327 aaPredicted RBP20.97■□□□□ 0.95
PPFIA3-201ENST00000334186 GZF1Q9H116 711 aaPredicted RBP20.96■□□□□ 0.95
PPFIA3-201ENST00000334186 TRHP20396 242 aaPredicted RBP20.96■□□□□ 0.95
PPFIA3-201ENST00000334186 LMOD2Q6P5Q4 547 aa20.95■□□□□ 0.94
PPFIA3-201ENST00000334186 EIF3AQ14152 1382 aaKnown RBP20.95■□□□□ 0.94
PPFIA3-201ENST00000334186 HDGFL2Q7Z4V5 671 aaPredicted RBP20.95■□□□□ 0.94
PPFIA3-201ENST00000334186 SPAG9O60271 1321 aaKnown RBP20.94■□□□□ 0.94
PPFIA3-201ENST00000334186 U2AF1L5P0DN76 240 aaPredicted RBP20.94■□□□□ 0.94
PPFIA3-201ENST00000334186 U2AF1Q01081 240 aaKnown RBP eCLIP20.94■□□□□ 0.94
PPFIA3-201ENST00000334186 RSPH6AQ9H0K4 717 aa20.94■□□□□ 0.94
PPFIA3-201ENST00000334186 DNMBPQ6XZF7 1577 aa20.94■□□□□ 0.94
PPFIA3-201ENST00000334186 OSCARQ8IYS5 282 aa20.94■□□□□ 0.94
PPFIA3-201ENST00000334186 HAP1P54257 671 aaPredicted RBP20.93■□□□□ 0.94
PPFIA3-201ENST00000334186 PDE3BQ13370 1112 aa20.92■□□□□ 0.94
PPFIA3-201ENST00000334186 GSE1Q14687 1217 aa20.92■□□□□ 0.94
PPFIA3-201ENST00000334186 ST20-MTHFSA0A0A6YYL1 179 aa20.92■□□□□ 0.94
PPFIA3-201ENST00000334186 CYB5RLQ6IPT4 315 aa20.92■□□□□ 0.94
PPFIA3-201ENST00000334186 PLCB2Q00722 1185 aa20.91■□□□□ 0.94
PPFIA3-201ENST00000334186 PRKRIP1Q9H875 184 aaPredicted RBP20.91■□□□□ 0.94
PPFIA3-201ENST00000334186 LRRC9Q6ZRR7 1453 aa20.9■□□□□ 0.94
PPFIA3-201ENST00000334186 SOX12O15370 315 aa20.9■□□□□ 0.94
PPFIA3-201ENST00000334186 CDK11BP21127 795 aaKnown RBP20.9■□□□□ 0.94
PPFIA3-201ENST00000334186 GOLGA6L3A6NEY3 463 aa20.89■□□□□ 0.94
PPFIA3-201ENST00000334186 KIF15Q9NS87 1388 aa20.89■□□□□ 0.94
PPFIA3-201ENST00000334186 IPO8O15397 1037 aaKnown RBP20.89■□□□□ 0.93
PPFIA3-201ENST00000334186 TPRNQ4KMQ1 711 aa20.89■□□□□ 0.93
PPFIA3-201ENST00000334186 IFT140Q96RY7 1462 aa20.89■□□□□ 0.93
PPFIA3-201ENST00000334186 GOLGA2Q08379 1002 aa20.89■□□□□ 0.93
PPFIA3-201ENST00000334186 PDE4AP27815 886 aa20.88■□□□□ 0.93
PPFIA3-201ENST00000334186 CCDC144AA2RUR9 1427 aa20.87■□□□□ 0.93
PPFIA3-201ENST00000334186 CASKIN1Q8WXD9 1431 aa20.87■□□□□ 0.93
PPFIA3-201ENST00000334186 MYBBP1AQ9BQG0 1328 aaKnown RBP20.86■□□□□ 0.93
PPFIA3-201ENST00000334186 HSP90AA2PQ14568 343 aaPredicted RBP20.86■□□□□ 0.93
PPFIA3-201ENST00000334186 FGD6Q6ZV73 1430 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms