RNA–Protein interactions for RNA: ENST00000333175.9

TMEM259-201, Transcript of transmembrane protein 259, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM259, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259-201ENST00000333175 KDM5BQ9UGL1 1544 aa31.36■■■□□ 2.61
TMEM259-201ENST00000333175 ABCC5O15440 1437 aa31.36■■■□□ 2.61
TMEM259-201ENST00000333175 MPHOSPH9Q99550 1183 aa31.35■■■□□ 2.61
TMEM259-201ENST00000333175 NUP160Q12769 1436 aa31.34■■■□□ 2.61
TMEM259-201ENST00000333175 TROQ12816 1431 aaPredicted RBP31.32■■■□□ 2.6
TMEM259-201ENST00000333175 DNMT1P26358 1616 aaKnown RBP31.32■■■□□ 2.6
TMEM259-201ENST00000333175 CARMIL2Q6F5E8 1435 aa31.3■■■□□ 2.6
TMEM259-201ENST00000333175 KIF14Q15058 1648 aa31.29■■■□□ 2.6
TMEM259-201ENST00000333175 ZNF777Q9ULD5 760 aaPredicted RBP31.29■■■□□ 2.6
TMEM259-201ENST00000333175 CFDP1Q9UEE9 299 aaPredicted RBP31.28■■■□□ 2.6
TMEM259-201ENST00000333175 ROCK1Q13464 1354 aa31.25■■■□□ 2.59
TMEM259-201ENST00000333175 CAMSAP2Q08AD1 1489 aa31.24■■■□□ 2.59
TMEM259-201ENST00000333175 GPATCH8Q9UKJ3 1502 aaKnown RBP31.21■■■□□ 2.59
TMEM259-201ENST00000333175 L3MBTL2Q969R5 705 aa31.16■■■□□ 2.58
TMEM259-201ENST00000333175 ITSN2Q9NZM3 1697 aa31.15■■■□□ 2.58
TMEM259-201ENST00000333175 SLC4A1APQ9BWU0 796 aaKnown RBP31.15■■■□□ 2.58
TMEM259-201ENST00000333175 ANP32CO43423 234 aa31.14■■■□□ 2.58
TMEM259-201ENST00000333175 ADCY10Q96PN6 1610 aa31.13■■■□□ 2.57
TMEM259-201ENST00000333175 HSPA5P11021 654 aaKnown RBP31.12■■■□□ 2.57
TMEM259-201ENST00000333175 ABCA8O94911 1581 aa31.1■■■□□ 2.57
TMEM259-201ENST00000333175 ANKRD30BQ9BXX2 1392 aa31.1■■■□□ 2.57
TMEM259-201ENST00000333175 PLEKHD1A6NEE1 506 aa31.1■■■□□ 2.57
TMEM259-201ENST00000333175 ATP10BO94823 1461 aa31.09■■■□□ 2.57
TMEM259-201ENST00000333175 NCOA1Q15788 1441 aa31.07■■■□□ 2.56
TMEM259-201ENST00000333175 ADGBQ8N7X0 1667 aa31.03■■■□□ 2.56
TMEM259-201ENST00000333175 SUPT16HQ9Y5B9 1047 aaKnown RBP31.03■■■□□ 2.56
TMEM259-201ENST00000333175 RPRD2Q5VT52 1461 aaKnown RBP31.02■■■□□ 2.56
TMEM259-201ENST00000333175 CDC42BPAQ5VT25 1732 aa31.02■■■□□ 2.56
TMEM259-201ENST00000333175 PZPP20742 1482 aa31.01■■■□□ 2.56
TMEM259-201ENST00000333175 WASHC2AQ641Q2 1341 aa31.01■■■□□ 2.56
TMEM259-201ENST00000333175 CROCC2H7BZ55 1655 aa31.01■■■□□ 2.55
TMEM259-201ENST00000333175 EIF4G2P78344 907 aaKnown RBP eCLIP31■■■□□ 2.55
TMEM259-201ENST00000333175 NBPF8Q3BBV2 869 aa30.99■■■□□ 2.55
TMEM259-201ENST00000333175 CCER2I3L3R5 266 aa30.99■■■□□ 2.55
TMEM259-201ENST00000333175 ABCC10Q5T3U5 1492 aa30.98■■■□□ 2.55
TMEM259-201ENST00000333175 PTPRGP23470 1445 aa30.97■■■□□ 2.55
TMEM259-201ENST00000333175 TEX14Q8IWB6 1497 aa30.97■■■□□ 2.55
TMEM259-201ENST00000333175 ANKRD30AQ9BXX3 1397 aa30.95■■■□□ 2.55
TMEM259-201ENST00000333175 ADGRL2O95490 1459 aa30.94■■■□□ 2.54
TMEM259-201ENST00000333175 CHD1O14646 1710 aa30.94■■■□□ 2.54
TMEM259-201ENST00000333175 ANKRD50Q9ULJ7 1429 aa30.89■■■□□ 2.54
TMEM259-201ENST00000333175 C11orf95C9JLR9 678 aaPredicted RBP30.89■■■□□ 2.54
TMEM259-201ENST00000333175 HNRNPMP52272 730 aaKnown RBP eCLIP30.89■■■□□ 2.548e-11■■□□□ 12.6
TMEM259-201ENST00000333175 PKD2Q13563 968 aa30.89■■■□□ 2.54
TMEM259-201ENST00000333175 C9orf84Q5VXU9 1444 aa30.88■■■□□ 2.53
TMEM259-201ENST00000333175 KIAA1107Q9UPP5 1409 aa30.84■■■□□ 2.53
TMEM259-201ENST00000333175 ZNF326Q5BKZ1 582 aaKnown RBP30.82■■■□□ 2.52
TMEM259-201ENST00000333175 TSPY4P0CV99 314 aa30.81■■■□□ 2.52
TMEM259-201ENST00000333175 TSPY10P0CW01 314 aa30.81■■■□□ 2.52
TMEM259-201ENST00000333175 NUP155O75694 1391 aa30.79■■■□□ 2.52
TMEM259-201ENST00000333175 SHANK2Q9UPX8 1470 aa30.77■■■□□ 2.52
TMEM259-201ENST00000333175 ERCC6L2Q5T890 1561 aa30.77■■■□□ 2.52
TMEM259-201ENST00000333175 CCDC7Q96M83 1385 aa30.77■■■□□ 2.52
TMEM259-201ENST00000333175 KIF15Q9NS87 1388 aa30.75■■■□□ 2.51
TMEM259-201ENST00000333175 CNTLNQ9NXG0 1405 aa30.75■■■□□ 2.51
TMEM259-201ENST00000333175 SAMD9LQ8IVG5 1584 aa30.72■■■□□ 2.51
TMEM259-201ENST00000333175 BCANQ96GW7 911 aa30.72■■■□□ 2.51
TMEM259-201ENST00000333175 CDC42BPBQ9Y5S2 1711 aa30.72■■■□□ 2.51
TMEM259-201ENST00000333175 MBD5Q9P267 1494 aa30.72■■■□□ 2.51
TMEM259-201ENST00000333175 SPATA31E1Q6ZUB1 1445 aa30.69■■■□□ 2.5
TMEM259-201ENST00000333175 SHROOM2Q13796 1616 aa30.68■■■□□ 2.5
TMEM259-201ENST00000333175 PREX2Q70Z35 1606 aa30.68■■■□□ 2.5
TMEM259-201ENST00000333175 KIF7Q2M1P5 1343 aa30.68■■■□□ 2.5
TMEM259-201ENST00000333175 FKBP8Q14318 412 aa30.68■■■□□ 2.5
TMEM259-201ENST00000333175 ARHGEF5Q12774 1597 aa30.66■■■□□ 2.5
TMEM259-201ENST00000333175 TTC37Q6PGP7 1564 aa30.66■■■□□ 2.5
TMEM259-201ENST00000333175 CCDC184Q52MB2 194 aa30.66■■■□□ 2.5
TMEM259-201ENST00000333175 CCDC141Q6ZP82 1450 aa30.65■■■□□ 2.5
TMEM259-201ENST00000333175 HNRNPUQ00839 825 aaKnown RBP eCLIP30.64■■■□□ 2.5
TMEM259-201ENST00000333175 SYCP2Q9BX26 1530 aa30.62■■■□□ 2.49
TMEM259-201ENST00000333175 ARHGAP5Q13017 1502 aa30.62■■■□□ 2.49
TMEM259-201ENST00000333175 POLR3GLQ9BT43 218 aa30.61■■■□□ 2.49
TMEM259-201ENST00000333175 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.59■■■□□ 2.497e-7■■■□□ 18.3
TMEM259-201ENST00000333175 USP47Q96K76 1375 aa30.58■■■□□ 2.49
TMEM259-201ENST00000333175 PRKRIP1Q9H875 184 aaPredicted RBP30.57■■■□□ 2.48
TMEM259-201ENST00000333175 KDM2AQ9Y2K7 1162 aa30.57■■■□□ 2.48
TMEM259-201ENST00000333175 ABCC2Q92887 1545 aa30.57■■■□□ 2.48
TMEM259-201ENST00000333175 KDM5DQ9BY66 1539 aa30.56■■■□□ 2.48
TMEM259-201ENST00000333175 CNGB1Q14028 1251 aaPredicted RBP30.56■■■□□ 2.48
TMEM259-201ENST00000333175 POLR1AO95602 1720 aaPredicted RBP30.53■■■□□ 2.48
TMEM259-201ENST00000333175 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.52■■■□□ 2.486e-8■□□□□ 9.5
TMEM259-201ENST00000333175 BCORL1Q5H9F3 1711 aa30.52■■■□□ 2.48
TMEM259-201ENST00000333175 NEFLP07196 543 aa30.5■■■□□ 2.47
TMEM259-201ENST00000333175 FAM135AQ9P2D6 1515 aa30.5■■■□□ 2.47
TMEM259-201ENST00000333175 DCAF11Q8TEB1 546 aa30.48■■■□□ 2.47
TMEM259-201ENST00000333175 FAM9BQ8IZU0 186 aa30.48■■■□□ 2.47
TMEM259-201ENST00000333175 MRS2Q9HD23 443 aa30.48■■■□□ 2.47
TMEM259-201ENST00000333175 MYO5CQ9NQX4 1742 aa30.47■■■□□ 2.47
TMEM259-201ENST00000333175 RSPH4AQ5TD94 716 aa30.47■■■□□ 2.47
TMEM259-201ENST00000333175 KDM5CP41229 1560 aa30.46■■■□□ 2.47
TMEM259-201ENST00000333175 CARD11Q9BXL7 1154 aa30.45■■■□□ 2.47
TMEM259-201ENST00000333175 UHRF1BP1Q6BDS2 1440 aa30.44■■■□□ 2.46
TMEM259-201ENST00000333175 RALGAPBQ86X10 1494 aa30.43■■■□□ 2.46
TMEM259-201ENST00000333175 ARHGEF12Q9NZN5 1544 aa30.41■■■□□ 2.46
TMEM259-201ENST00000333175 ZCCHC11Q5TAX3 1644 aaKnown RBP30.41■■■□□ 2.46
TMEM259-201ENST00000333175 CLASP1Q7Z460 1538 aa30.4■■■□□ 2.46
TMEM259-201ENST00000333175 PLEKHH2Q8IVE3 1493 aa30.39■■■□□ 2.46
TMEM259-201ENST00000333175 RGL3Q3MIN7 710 aa30.38■■■□□ 2.45
TMEM259-201ENST00000333175 MAST1Q9Y2H9 1570 aa30.37■■■□□ 2.45
TMEM259-201ENST00000333175 DHX29Q7Z478 1369 aaKnown RBP30.35■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms