RNA–Protein interactions for RNA: ENST00000332772.4

SIMC1-201, Transcript of SUMO interacting motifs containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIMC1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-201ENST00000332772 ROCK1Q13464 1354 aa13.24□□□□□ -0.29
SIMC1-201ENST00000332772 UACAQ9BZF9 1416 aa13.24□□□□□ -0.29
SIMC1-201ENST00000332772 ATP10BO94823 1461 aa13.24□□□□□ -0.29
SIMC1-201ENST00000332772 DNMT1P26358 1616 aaKnown RBP13.24□□□□□ -0.29
SIMC1-201ENST00000332772 ZNF316A6NFI3 1004 aaPredicted RBP13.23□□□□□ -0.29
SIMC1-201ENST00000332772 KIF14Q15058 1648 aa13.22□□□□□ -0.29
SIMC1-201ENST00000332772 PLEKHD1A6NEE1 506 aa13.21□□□□□ -0.3
SIMC1-201ENST00000332772 GPATCH8Q9UKJ3 1502 aaKnown RBP13.2□□□□□ -0.3
SIMC1-201ENST00000332772 DAPK1P53355 1430 aa13.19□□□□□ -0.3
SIMC1-201ENST00000332772 ABCC10Q5T3U5 1492 aa13.19□□□□□ -0.3
SIMC1-201ENST00000332772 ABCC2Q92887 1545 aa13.17□□□□□ -0.3
SIMC1-201ENST00000332772 UHRF1BP1LA0JNW5 1464 aa13.17□□□□□ -0.3
SIMC1-201ENST00000332772 CDC42BPAQ5VT25 1732 aa13.17□□□□□ -0.3
SIMC1-201ENST00000332772 RNF39Q9H2S5 420 aa13.16□□□□□ -0.3
SIMC1-201ENST00000332772 ABCC5O15440 1437 aa13.16□□□□□ -0.3
SIMC1-201ENST00000332772 ADGBQ8N7X0 1667 aa13.16□□□□□ -0.3
SIMC1-201ENST00000332772 CAMSAP2Q08AD1 1489 aa13.15□□□□□ -0.3
SIMC1-201ENST00000332772 CROCC2H7BZ55 1655 aa13.15□□□□□ -0.3
SIMC1-201ENST00000332772 ADGRL2O95490 1459 aa13.15□□□□□ -0.3
SIMC1-201ENST00000332772 CFDP1Q9UEE9 299 aaPredicted RBP13.14□□□□□ -0.31
SIMC1-201ENST00000332772 ARID3CA6NKF2 412 aa13.14□□□□□ -0.31
SIMC1-201ENST00000332772 SHANK2Q9UPX8 1470 aa13.13□□□□□ -0.31
SIMC1-201ENST00000332772 DIEXFQ68CQ4 756 aaKnown RBP13.13□□□□□ -0.31
SIMC1-201ENST00000332772 ARHGEF5Q12774 1597 aa13.11□□□□□ -0.31
SIMC1-201ENST00000332772 PREX2Q70Z35 1606 aa13.1□□□□□ -0.31
SIMC1-201ENST00000332772 ERCC6L2Q5T890 1561 aa13.1□□□□□ -0.31
SIMC1-201ENST00000332772 RSPH4AQ5TD94 716 aa13.1□□□□□ -0.31
SIMC1-201ENST00000332772 KDM5BQ9UGL1 1544 aa13.09□□□□□ -0.31
SIMC1-201ENST00000332772 NCOA1Q15788 1441 aa13.08□□□□□ -0.32
SIMC1-201ENST00000332772 RRP7BPQ9NSQ0 103 aa13.08□□□□□ -0.32
SIMC1-201ENST00000332772 CDC42BPBQ9Y5S2 1711 aa13.07□□□□□ -0.32
SIMC1-201ENST00000332772 ANKRD30AQ9BXX3 1397 aa13.06□□□□□ -0.32
SIMC1-201ENST00000332772 ZNF644Q9H582 1327 aaPredicted RBP13.06□□□□□ -0.32
SIMC1-201ENST00000332772 HOXD11P31277 338 aaPredicted RBP13.06□□□□□ -0.32
SIMC1-201ENST00000332772 CHIC2Q9UKJ5 165 aa13.06□□□□□ -0.32
SIMC1-201ENST00000332772 ZCCHC11Q5TAX3 1644 aaKnown RBP13.06□□□□□ -0.32
SIMC1-201ENST00000332772 PLEKHH2Q8IVE3 1493 aa13.06□□□□□ -0.32
SIMC1-201ENST00000332772 KDM6BO15054 1643 aa13.05□□□□□ -0.32
SIMC1-201ENST00000332772 MYO5CQ9NQX4 1742 aa13.05□□□□□ -0.32
SIMC1-201ENST00000332772 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.04□□□□□ -0.32
SIMC1-201ENST00000332772 ARAP3Q8WWN8 1544 aa13.03□□□□□ -0.32
SIMC1-201ENST00000332772 MAST1Q9Y2H9 1570 aa13.03□□□□□ -0.32
SIMC1-201ENST00000332772 PPP1R15AO75807 674 aaPredicted RBP13.03□□□□□ -0.32
SIMC1-201ENST00000332772 C1QBPQ07021 282 aaKnown RBP13.03□□□□□ -0.32
SIMC1-201ENST00000332772 KIAA1107Q9UPP5 1409 aa13.03□□□□□ -0.32
SIMC1-201ENST00000332772 DENND4BO75064 1496 aaPredicted RBP13.03□□□□□ -0.32
SIMC1-201ENST00000332772 MBD5Q9P267 1494 aa13.03□□□□□ -0.32
SIMC1-201ENST00000332772 SIN3AQ96ST3 1273 aa13.02□□□□□ -0.32
SIMC1-201ENST00000332772 SAMD9LQ8IVG5 1584 aa13.02□□□□□ -0.33
SIMC1-201ENST00000332772 MPHOSPH9Q99550 1183 aa13.02□□□□□ -0.33
SIMC1-201ENST00000332772 TONSLQ96HA7 1378 aa13.01□□□□□ -0.33
SIMC1-201ENST00000332772 CCDC141Q6ZP82 1450 aa13.01□□□□□ -0.33
SIMC1-201ENST00000332772 C9orf84Q5VXU9 1444 aa13.01□□□□□ -0.33
SIMC1-201ENST00000332772 TTC37Q6PGP7 1564 aa13.01□□□□□ -0.33
SIMC1-201ENST00000332772 TSPY4P0CV99 314 aa13□□□□□ -0.33
SIMC1-201ENST00000332772 TSPY10P0CW01 314 aa13□□□□□ -0.33
SIMC1-201ENST00000332772 TRIM52Q96A61 297 aa12.99□□□□□ -0.33
SIMC1-201ENST00000332772 KDM5DQ9BY66 1539 aa12.99□□□□□ -0.33
SIMC1-201ENST00000332772 NEUROD1Q13562 356 aa12.99□□□□□ -0.33
SIMC1-201ENST00000332772 ZNF777Q9ULD5 760 aaPredicted RBP12.99□□□□□ -0.33
SIMC1-201ENST00000332772 PLCH2O75038 1416 aa12.98□□□□□ -0.33
SIMC1-201ENST00000332772 ANKRD50Q9ULJ7 1429 aa12.98□□□□□ -0.33
SIMC1-201ENST00000332772 ARHGAP5Q13017 1502 aa12.97□□□□□ -0.33
SIMC1-201ENST00000332772 OSCARQ8IYS5 282 aa12.97□□□□□ -0.33
SIMC1-201ENST00000332772 ANKRD30BQ9BXX2 1392 aa12.96□□□□□ -0.33
SIMC1-201ENST00000332772 PLXNC1O60486 1568 aa12.96□□□□□ -0.34
SIMC1-201ENST00000332772 PZPP20742 1482 aa12.96□□□□□ -0.34
SIMC1-201ENST00000332772 RPRD2Q5VT52 1461 aaKnown RBP12.95□□□□□ -0.34
SIMC1-201ENST00000332772 WDR7Q9Y4E6 1490 aa12.93□□□□□ -0.34
SIMC1-201ENST00000332772 SYCP2Q9BX26 1530 aa12.93□□□□□ -0.34
SIMC1-201ENST00000332772 EFCAB2Q5VUJ9 269 aa12.93□□□□□ -0.34
SIMC1-201ENST00000332772 ABCA9Q8IUA7 1624 aa12.92□□□□□ -0.34
SIMC1-201ENST00000332772 SLC4A1APQ9BWU0 796 aaKnown RBP12.92□□□□□ -0.34
SIMC1-201ENST00000332772 KIF15Q9NS87 1388 aa12.92□□□□□ -0.34
SIMC1-201ENST00000332772 ABCC1P33527 1531 aa12.91□□□□□ -0.34
SIMC1-201ENST00000332772 HNRNPMP52272 730 aaKnown RBP eCLIP12.91□□□□□ -0.34
SIMC1-201ENST00000332772 PPP4R3CPQ6ZMV5 832 aa12.91□□□□□ -0.34
SIMC1-201ENST00000332772 UNC13BO14795 1591 aa12.89□□□□□ -0.35
SIMC1-201ENST00000332772 DUOX2Q9NRD8 1548 aa12.89□□□□□ -0.35
SIMC1-201ENST00000332772 RTEL1-TNFRSF6BF6WH68 1400 aa12.89□□□□□ -0.35
SIMC1-201ENST00000332772 ERBINQ96RT1 1412 aa12.87□□□□□ -0.35
SIMC1-201ENST00000332772 TEX14Q8IWB6 1497 aa12.87□□□□□ -0.35
SIMC1-201ENST00000332772 KCNH8Q96L42 1107 aa12.86□□□□□ -0.35
SIMC1-201ENST00000332772 NUP155O75694 1391 aa12.86□□□□□ -0.35
SIMC1-201ENST00000332772 ARHGEF12Q9NZN5 1544 aa12.85□□□□□ -0.35
SIMC1-201ENST00000332772 RNF216Q9NWF9 866 aaPredicted RBP12.85□□□□□ -0.35
SIMC1-201ENST00000332772 MIER1Q8N108 512 aa12.85□□□□□ -0.35
SIMC1-201ENST00000332772 MAGI2Q86UL8 1455 aa12.84□□□□□ -0.35
SIMC1-201ENST00000332772 CNKSR2Q8WXI2 1034 aa12.84□□□□□ -0.35
SIMC1-201ENST00000332772 ASXL2Q76L83 1435 aa12.84□□□□□ -0.35
SIMC1-201ENST00000332772 IQGAP3Q86VI3 1631 aa12.84□□□□□ -0.35
SIMC1-201ENST00000332772 CENPBP07199 599 aaPredicted RBP12.83□□□□□ -0.36
SIMC1-201ENST00000332772 CFAP74Q9C0B2 1584 aa12.83□□□□□ -0.36
SIMC1-201ENST00000332772 FAM135AQ9P2D6 1515 aa12.83□□□□□ -0.36
SIMC1-201ENST00000332772 NPM1P06748 294 aaKnown RBP eCLIP12.82□□□□□ -0.36
SIMC1-201ENST00000332772 PKD2Q13563 968 aa12.82□□□□□ -0.36
SIMC1-201ENST00000332772 L3MBTL2Q969R5 705 aa12.82□□□□□ -0.36
SIMC1-201ENST00000332772 FANCAO15360 1455 aa12.81□□□□□ -0.36
SIMC1-201ENST00000332772 ATP10AO60312 1499 aa12.8□□□□□ -0.36
SIMC1-201ENST00000332772 INO80Q9ULG1 1556 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms