RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 EHBP1L1Q8N3D4 1523 aa23.73■■□□□ 1.39
PRKCD-201ENST00000330452 DISP1Q96F81 1524 aa23.72■■□□□ 1.39
PRKCD-201ENST00000330452 JPH4Q96JJ6 628 aa23.71■■□□□ 1.39
PRKCD-201ENST00000330452 KIAA0586Q9BVV6 1533 aa23.71■■□□□ 1.39
PRKCD-201ENST00000330452 CEP170Q5SW79 1584 aa23.7■■□□□ 1.38
PRKCD-201ENST00000330452 RRP7BPQ9NSQ0 103 aa23.7■■□□□ 1.38
PRKCD-201ENST00000330452 UGGT2Q9NYU1 1516 aa23.69■■□□□ 1.38
PRKCD-201ENST00000330452 EPRSP07814 1512 aaKnown RBP23.68■■□□□ 1.38
PRKCD-201ENST00000330452 SYNJ2O15056 1496 aa23.67■■□□□ 1.38
PRKCD-201ENST00000330452 NBR1Q14596 966 aa23.66■■□□□ 1.38
PRKCD-201ENST00000330452 ARHGEF11O15085 1522 aa23.65■■□□□ 1.38
PRKCD-201ENST00000330452 PLB1Q6P1J6 1458 aa23.65■■□□□ 1.38
PRKCD-201ENST00000330452 ZNF644Q9H582 1327 aaPredicted RBP23.65■■□□□ 1.38
PRKCD-201ENST00000330452 NEFLP07196 543 aa23.65■■□□□ 1.38
PRKCD-201ENST00000330452 MAGI1Q96QZ7 1491 aaPredicted RBP23.63■■□□□ 1.37
PRKCD-201ENST00000330452 KIAA0556O60303 1618 aa23.62■■□□□ 1.37
PRKCD-201ENST00000330452 HECW1Q76N89 1606 aa23.59■■□□□ 1.37
PRKCD-201ENST00000330452 ANP32CO43423 234 aa23.58■■□□□ 1.37
PRKCD-201ENST00000330452 TRIM52Q96A61 297 aa23.58■■□□□ 1.37
PRKCD-201ENST00000330452 ZNF777Q9ULD5 760 aaPredicted RBP23.58■■□□□ 1.37
PRKCD-201ENST00000330452 NUP153P49790 1475 aaKnown RBP23.57■■□□□ 1.36
PRKCD-201ENST00000330452 TCOF1Q13428 1488 aaKnown RBP23.56■■□□□ 1.36
PRKCD-201ENST00000330452 PRG4Q92954 1404 aaPredicted RBP23.55■■□□□ 1.36
PRKCD-201ENST00000330452 KDM5BQ9UGL1 1544 aa23.53■■□□□ 1.36
PRKCD-201ENST00000330452 CDK11AQ9UQ88 783 aaPredicted RBP23.53■■□□□ 1.36
PRKCD-201ENST00000330452 CCER2I3L3R5 266 aa23.52■■□□□ 1.36
PRKCD-201ENST00000330452 DENND4BO75064 1496 aaPredicted RBP23.51■■□□□ 1.35
PRKCD-201ENST00000330452 KDM6BO15054 1643 aa23.51■■□□□ 1.35
PRKCD-201ENST00000330452 NOP58Q9Y2X3 529 aaKnown RBP23.49■■□□□ 1.35
PRKCD-201ENST00000330452 NUP160Q12769 1436 aa23.49■■□□□ 1.35
PRKCD-201ENST00000330452 FOXD1Q16676 465 aa23.47■■□□□ 1.35
PRKCD-201ENST00000330452 MIA2Q96PC5 1412 aa23.47■■□□□ 1.35
PRKCD-201ENST00000330452 GCC2Q8IWJ2 1684 aa23.46■■□□□ 1.35
PRKCD-201ENST00000330452 MPHOSPH9Q99550 1183 aa23.46■■□□□ 1.35
PRKCD-201ENST00000330452 RAPGEF6Q8TEU7 1601 aa23.45■■□□□ 1.34
PRKCD-201ENST00000330452 AKNAQ7Z591 1439 aa23.43■■□□□ 1.34
PRKCD-201ENST00000330452 CARMIL2Q6F5E8 1435 aa23.43■■□□□ 1.34
PRKCD-201ENST00000330452 HSPA5P11021 654 aaKnown RBP23.42■■□□□ 1.34
PRKCD-201ENST00000330452 PAK3O75914 559 aaPredicted RBP23.41■■□□□ 1.34
PRKCD-201ENST00000330452 RTL5Q5HYW3 569 aaPredicted RBP23.41■■□□□ 1.34
PRKCD-201ENST00000330452 CFDP1Q9UEE9 299 aaPredicted RBP23.38■■□□□ 1.33
PRKCD-201ENST00000330452 L3MBTL2Q969R5 705 aa23.37■■□□□ 1.33
PRKCD-201ENST00000330452 WASHC2AQ641Q2 1341 aa23.37■■□□□ 1.33
PRKCD-201ENST00000330452 ZMYND15Q9H091 742 aa23.36■■□□□ 1.33
PRKCD-201ENST00000330452 CHD1O14646 1710 aa23.36■■□□□ 1.33
PRKCD-201ENST00000330452 DAPK1P53355 1430 aa23.36■■□□□ 1.33
PRKCD-201ENST00000330452 ERCC6L2Q5T890 1561 aa23.34■■□□□ 1.33
PRKCD-201ENST00000330452 KIF14Q15058 1648 aa23.34■■□□□ 1.33
PRKCD-201ENST00000330452 ABCC5O15440 1437 aa23.34■■□□□ 1.33
PRKCD-201ENST00000330452 PLEKHD1A6NEE1 506 aa23.33■■□□□ 1.33
PRKCD-201ENST00000330452 PTPRGP23470 1445 aa23.32■■□□□ 1.32
PRKCD-201ENST00000330452 EIF4G2P78344 907 aaKnown RBP eCLIP23.32■■□□□ 1.322e-6■■■■■ 35.1
PRKCD-201ENST00000330452 C11orf95C9JLR9 678 aaPredicted RBP23.31■■□□□ 1.32
PRKCD-201ENST00000330452 ROCK1Q13464 1354 aa23.29■■□□□ 1.32
PRKCD-201ENST00000330452 TROQ12816 1431 aaPredicted RBP23.29■■□□□ 1.32
PRKCD-201ENST00000330452 ATP10BO94823 1461 aa23.28■■□□□ 1.32
PRKCD-201ENST00000330452 GLIPR1L2Q4G1C9 344 aa23.28■■□□□ 1.32
PRKCD-201ENST00000330452 ANKRD30BQ9BXX2 1392 aa23.27■■□□□ 1.32
PRKCD-201ENST00000330452 DNMT1P26358 1616 aaKnown RBP23.26■■□□□ 1.31
PRKCD-201ENST00000330452 SLC4A1APQ9BWU0 796 aaKnown RBP23.26■■□□□ 1.31
PRKCD-201ENST00000330452 NBPF8Q3BBV2 869 aa23.26■■□□□ 1.31
PRKCD-201ENST00000330452 HNRNPMP52272 730 aaKnown RBP eCLIP23.23■■□□□ 1.31
PRKCD-201ENST00000330452 HNRNPUQ00839 825 aaKnown RBP eCLIP23.23■■□□□ 1.31
PRKCD-201ENST00000330452 VSIG10Q8N0Z9 540 aa23.23■■□□□ 1.31
PRKCD-201ENST00000330452 GPATCH8Q9UKJ3 1502 aaKnown RBP23.22■■□□□ 1.31
PRKCD-201ENST00000330452 RPRD2Q5VT52 1461 aaKnown RBP23.21■■□□□ 1.31
PRKCD-201ENST00000330452 RSPH6AQ9H0K4 717 aa23.19■■□□□ 1.3
PRKCD-201ENST00000330452 ABCA8O94911 1581 aa23.18■■□□□ 1.3
PRKCD-201ENST00000330452 CAMSAP2Q08AD1 1489 aa23.18■■□□□ 1.3
PRKCD-201ENST00000330452 CCDC184Q52MB2 194 aa23.17■■□□□ 1.3
PRKCD-201ENST00000330452 TEX14Q8IWB6 1497 aa23.17■■□□□ 1.3
PRKCD-201ENST00000330452 CNTLNQ9NXG0 1405 aa23.17■■□□□ 1.3
PRKCD-201ENST00000330452 CCDC7Q96M83 1385 aa23.16■■□□□ 1.3
PRKCD-201ENST00000330452 WASHC2CQ9Y4E1 1318 aa23.15■■□□□ 1.3
PRKCD-201ENST00000330452 NCOA1Q15788 1441 aa23.15■■□□□ 1.3
PRKCD-201ENST00000330452 BRPF3Q9ULD4 1205 aa23.13■■□□□ 1.29
PRKCD-201ENST00000330452 PZPP20742 1482 aa23.12■■□□□ 1.29
PRKCD-201ENST00000330452 PRKRIP1Q9H875 184 aaPredicted RBP23.09■■□□□ 1.29
PRKCD-201ENST00000330452 KIF7Q2M1P5 1343 aa23.07■■□□□ 1.28
PRKCD-201ENST00000330452 SPATA31E1Q6ZUB1 1445 aa23.07■■□□□ 1.28
PRKCD-201ENST00000330452 IRX6P78412 446 aaPredicted RBP23.05■■□□□ 1.28
PRKCD-201ENST00000330452 PKD2Q13563 968 aa23.05■■□□□ 1.28
PRKCD-201ENST00000330452 ITSN2Q9NZM3 1697 aa23.05■■□□□ 1.28
PRKCD-201ENST00000330452 ZNF326Q5BKZ1 582 aaKnown RBP23.05■■□□□ 1.28
PRKCD-201ENST00000330452 FAM9BQ8IZU0 186 aa23.05■■□□□ 1.28
PRKCD-201ENST00000330452 ABCC10Q5T3U5 1492 aa23.03■■□□□ 1.28
PRKCD-201ENST00000330452 IPO9Q96P70 1041 aaKnown RBP23.03■■□□□ 1.28
PRKCD-201ENST00000330452 MRS2Q9HD23 443 aa23.02■■□□□ 1.28
PRKCD-201ENST00000330452 CDC42BPAQ5VT25 1732 aa23.02■■□□□ 1.28
PRKCD-201ENST00000330452 ANKRD30AQ9BXX3 1397 aa23.01■■□□□ 1.27
PRKCD-201ENST00000330452 KIAA1107Q9UPP5 1409 aa23.01■■□□□ 1.27
PRKCD-201ENST00000330452 ADGRL2O95490 1459 aa23.01■■□□□ 1.27
PRKCD-201ENST00000330452 ADCY10Q96PN6 1610 aa23■■□□□ 1.27
PRKCD-201ENST00000330452 ADGBQ8N7X0 1667 aa23■■□□□ 1.27
PRKCD-201ENST00000330452 TSPY4P0CV99 314 aa23■■□□□ 1.27
PRKCD-201ENST00000330452 TSPY10P0CW01 314 aa23■■□□□ 1.27
PRKCD-201ENST00000330452 ZBTB47Q9UFB7 747 aaPredicted RBP22.99■■□□□ 1.27
PRKCD-201ENST00000330452 A0A0U1RQG5 324 aaPredicted RBP22.98■■□□□ 1.27
PRKCD-201ENST00000330452 ANKRD50Q9ULJ7 1429 aa22.98■■□□□ 1.27
PRKCD-201ENST00000330452 CNGB1Q14028 1251 aaPredicted RBP22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms