RNA–Protein interactions for RNA: ENST00000329092.12

RPL35A-201, Transcript of ribosomal protein L35a, humanhuman

TSL 3

Gene RPL35A, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35A-201ENST00000329092 ATP10BO94823 1461 aa9.86□□□□□ -0.83
RPL35A-201ENST00000329092 ARAP3Q8WWN8 1544 aa9.85□□□□□ -0.83
RPL35A-201ENST00000329092 CFAP43Q8NDM7 1665 aa9.84□□□□□ -0.83
RPL35A-201ENST00000329092 SPDYE2BA6NHP3 402 aa9.84□□□□□ -0.83
RPL35A-201ENST00000329092 SPDYE6P0CI01 402 aa9.84□□□□□ -0.83
RPL35A-201ENST00000329092 HSPA2P54652 639 aa9.84□□□□□ -0.83
RPL35A-201ENST00000329092 SPDYE2Q495Y8 402 aa9.84□□□□□ -0.83
RPL35A-201ENST00000329092 POTEHQ6S545 545 aa9.83□□□□□ -0.84
RPL35A-201ENST00000329092 ARID4BQ4LE39 1312 aaPredicted RBP9.82□□□□□ -0.84
RPL35A-201ENST00000329092 ADAMTSL3P82987 1691 aa9.82□□□□□ -0.84
RPL35A-201ENST00000329092 GOLGA3Q08378 1498 aa9.81□□□□□ -0.84
RPL35A-201ENST00000329092 REM2Q8IYK8 340 aaPredicted RBP9.81□□□□□ -0.84
RPL35A-201ENST00000329092 LMTK3Q96Q04 1460 aa9.8□□□□□ -0.84
RPL35A-201ENST00000329092 PRXQ9BXM0 1461 aa9.8□□□□□ -0.84
RPL35A-201ENST00000329092 CHRDL2Q6WN34 429 aa9.79□□□□□ -0.84
RPL35A-201ENST00000329092 ZNF692Q9BU19 519 aaPredicted RBP9.79□□□□□ -0.84
RPL35A-201ENST00000329092 RANGAP1P46060 587 aaPredicted RBP9.78□□□□□ -0.84
RPL35A-201ENST00000329092 FRMPD1Q5SYB0 1578 aa9.77□□□□□ -0.85
RPL35A-201ENST00000329092 ILDR2Q71H61 639 aa9.77□□□□□ -0.85
RPL35A-201ENST00000329092 MADDQ8WXG6 1647 aa9.77□□□□□ -0.85
RPL35A-201ENST00000329092 CTTNBP2Q8WZ74 1663 aa9.77□□□□□ -0.85
RPL35A-201ENST00000329092 PHLDB1Q86UU1 1377 aa9.76□□□□□ -0.85
RPL35A-201ENST00000329092 PCF11O94913 1555 aaKnown RBP9.76□□□□□ -0.85
RPL35A-201ENST00000329092 ABCA9Q8IUA7 1624 aa9.76□□□□□ -0.85
RPL35A-201ENST00000329092 MLECQ14165 292 aa9.76□□□□□ -0.85
RPL35A-201ENST00000329092 CERKQ8TCT0 537 aa9.76□□□□□ -0.85
RPL35A-201ENST00000329092 BCORL1Q5H9F3 1711 aa9.76□□□□□ -0.85
RPL35A-201ENST00000329092 NEO1Q92859 1461 aa9.75□□□□□ -0.85
RPL35A-201ENST00000329092 CEBPAP49715 358 aaPredicted RBP9.73□□□□□ -0.85
RPL35A-201ENST00000329092 AKNAQ7Z591 1439 aa9.73□□□□□ -0.85
RPL35A-201ENST00000329092 YEATS2Q9ULM3 1422 aa9.73□□□□□ -0.85
RPL35A-201ENST00000329092 NUP153P49790 1475 aaKnown RBP9.72□□□□□ -0.85
RPL35A-201ENST00000329092 SSUH2Q9Y2M2 353 aa9.72□□□□□ -0.85
RPL35A-201ENST00000329092 SIGLEC1Q9BZZ2 1709 aa9.72□□□□□ -0.85
RPL35A-201ENST00000329092 PLEKHD1A6NEE1 506 aa9.71□□□□□ -0.86
RPL35A-201ENST00000329092 DENND4BO75064 1496 aaPredicted RBP9.71□□□□□ -0.86
RPL35A-201ENST00000329092 RIMS1Q86UR5 1692 aaKnown RBP9.71□□□□□ -0.86
RPL35A-201ENST00000329092 PITPNM1O00562 1244 aa9.7□□□□□ -0.86
RPL35A-201ENST00000329092 FAM9AQ8IZU1 332 aaPredicted RBP9.7□□□□□ -0.86
RPL35A-201ENST00000329092 FHOD3Q2V2M9 1422 aa9.7□□□□□ -0.86
RPL35A-201ENST00000329092 RAPGEF6Q8TEU7 1601 aa9.68□□□□□ -0.86
RPL35A-201ENST00000329092 SAMD9Q5K651 1589 aa9.68□□□□□ -0.86
RPL35A-201ENST00000329092 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.67□□□□□ -0.869e-36■□□□□ 9.6
RPL35A-201ENST00000329092 FANCAO15360 1455 aa9.67□□□□□ -0.86
RPL35A-201ENST00000329092 ARHGEF40Q8TER5 1519 aa9.66□□□□□ -0.86
RPL35A-201ENST00000329092 DISP3Q9P2K9 1392 aa9.66□□□□□ -0.86
RPL35A-201ENST00000329092 RICTORQ6R327 1708 aa9.66□□□□□ -0.86
RPL35A-201ENST00000329092 SCAPERQ9BY12 1400 aa9.65□□□□□ -0.86
RPL35A-201ENST00000329092 SOCS7O14512 581 aa9.65□□□□□ -0.86
RPL35A-201ENST00000329092 CLEC11AQ9Y240 323 aa9.65□□□□□ -0.86
RPL35A-201ENST00000329092 AFAP1Q8N556 730 aa9.64□□□□□ -0.87
RPL35A-201ENST00000329092 SPDYE1Q8NFV5 336 aaPredicted RBP9.64□□□□□ -0.87
RPL35A-201ENST00000329092 HECW1Q76N89 1606 aa9.64□□□□□ -0.87
RPL35A-201ENST00000329092 TTC37Q6PGP7 1564 aa9.63□□□□□ -0.87
RPL35A-201ENST00000329092 ZFYVE16Q7Z3T8 1539 aa9.63□□□□□ -0.87
RPL35A-201ENST00000329092 POGZQ7Z3K3 1410 aa9.63□□□□□ -0.87
RPL35A-201ENST00000329092 PLCH2O75038 1416 aa9.62□□□□□ -0.87
RPL35A-201ENST00000329092 CDK13Q14004 1512 aaKnown RBP9.61□□□□□ -0.87
RPL35A-201ENST00000329092 ZMYM4Q5VZL5 1548 aa9.61□□□□□ -0.87
RPL35A-201ENST00000329092 ATP10AO60312 1499 aa9.6□□□□□ -0.87
RPL35A-201ENST00000329092 MAGI2Q86UL8 1455 aa9.6□□□□□ -0.87
RPL35A-201ENST00000329092 PIP4P2Q8N4L2 257 aa9.6□□□□□ -0.87
RPL35A-201ENST00000329092 ATP1B4Q9UN42 357 aaPredicted RBP9.6□□□□□ -0.87
RPL35A-201ENST00000329092 ARHGEF12Q9NZN5 1544 aa9.6□□□□□ -0.87
RPL35A-201ENST00000329092 EFCAB5A4FU69 1503 aa9.59□□□□□ -0.87
RPL35A-201ENST00000329092 STRCQ7RTU9 1775 aa9.59□□□□□ -0.87
RPL35A-201ENST00000329092 SPDYE4A6NLX3 237 aa9.58□□□□□ -0.88
RPL35A-201ENST00000329092 EFCAB2Q5VUJ9 269 aa9.58□□□□□ -0.88
RPL35A-201ENST00000329092 FXR2P51116 673 aaKnown RBP eCLIP9.57□□□□□ -0.88
RPL35A-201ENST00000329092 FER1L4A9Z1Z3 1794 aa9.57□□□□□ -0.88
RPL35A-201ENST00000329092 C9orf84Q5VXU9 1444 aa9.56□□□□□ -0.88
RPL35A-201ENST00000329092 MYT1LQ9UL68 1186 aa9.55□□□□□ -0.88
RPL35A-201ENST00000329092 CFAP74Q9C0B2 1584 aa9.54□□□□□ -0.88
RPL35A-201ENST00000329092 UHRF1BP1Q6BDS2 1440 aa9.54□□□□□ -0.88
RPL35A-201ENST00000329092 LTBP4Q8N2S1 1624 aa9.53□□□□□ -0.88
RPL35A-201ENST00000329092 NCKAP5LQ9HCH0 1330 aa9.53□□□□□ -0.88
RPL35A-201ENST00000329092 PREX1Q8TCU6 1659 aa9.52□□□□□ -0.89
RPL35A-201ENST00000329092 PTPRTO14522 1441 aa9.52□□□□□ -0.89
RPL35A-201ENST00000329092 TRAPPC8Q9Y2L5 1435 aa9.52□□□□□ -0.89
RPL35A-201ENST00000329092 KIF14Q15058 1648 aa9.52□□□□□ -0.89
RPL35A-201ENST00000329092 ZNF335Q9H4Z2 1342 aaPredicted RBP9.51□□□□□ -0.89
RPL35A-201ENST00000329092 PRR29P0C7W0 189 aa9.5□□□□□ -0.89
RPL35A-201ENST00000329092 UBTFP17480 764 aaKnown RBP9.5□□□□□ -0.89
RPL35A-201ENST00000329092 ZNF518AQ6AHZ1 1483 aa9.5□□□□□ -0.89
RPL35A-201ENST00000329092 DIP2CQ9Y2E4 1556 aa9.5□□□□□ -0.89
RPL35A-201ENST00000329092 ARHGAP35Q9NRY4 1499 aa9.49□□□□□ -0.89
RPL35A-201ENST00000329092 CDK11AQ9UQ88 783 aaPredicted RBP9.49□□□□□ -0.89
RPL35A-201ENST00000329092 KDM5CP41229 1560 aa9.49□□□□□ -0.89
RPL35A-201ENST00000329092 TROQ12816 1431 aaPredicted RBP9.48□□□□□ -0.89
RPL35A-201ENST00000329092 NCOA1Q15788 1441 aa9.48□□□□□ -0.89
RPL35A-201ENST00000329092 ARHGAP5Q13017 1502 aa9.48□□□□□ -0.89
RPL35A-201ENST00000329092 PRKAR2AP13861 404 aaKnown RBP9.48□□□□□ -0.89
RPL35A-201ENST00000329092 SPATA31D1Q6ZQQ2 1576 aa9.48□□□□□ -0.89
RPL35A-201ENST00000329092 C3P01024 1663 aa9.48□□□□□ -0.89
RPL35A-201ENST00000329092 EEA1Q15075 1411 aa9.48□□□□□ -0.89
RPL35A-201ENST00000329092 MLH3Q9UHC1 1453 aa9.47□□□□□ -0.89
RPL35A-201ENST00000329092 SETD1BQ9UPS6 1966 aaKnown RBP9.47□□□□□ -0.89
RPL35A-201ENST00000329092 ABCA6Q8N139 1617 aa9.47□□□□□ -0.89
RPL35A-201ENST00000329092 UBAP1LF5GYI3 381 aa9.47□□□□□ -0.89
RPL35A-201ENST00000329092 ESF1Q9H501 851 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms