RNA–Protein interactions for RNA: ENST00000328945.6

SDR42E1-201, Transcript of short chain dehydrogenase/reductase family 42E, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDR42E1, Length 11,566 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1-201ENST00000328945 RSF1Q96T23 1441 aaPredicted RBP6.79□□□□□ -1.32
SDR42E1-201ENST00000328945 GOLGA6L1Q8N7Z2 621 aa6.79□□□□□ -1.32
SDR42E1-201ENST00000328945 MAP7D2Q96T17 732 aa6.79□□□□□ -1.32
SDR42E1-201ENST00000328945 ISY1Q9ULR0 285 aaKnown RBP6.79□□□□□ -1.32
SDR42E1-201ENST00000328945 SOX12O15370 315 aa6.79□□□□□ -1.32
SDR42E1-201ENST00000328945 GOLGA2Q08379 1002 aa6.79□□□□□ -1.32
SDR42E1-201ENST00000328945 CFAP44Q96MT7 982 aa6.79□□□□□ -1.32
SDR42E1-201ENST00000328945 ZNF771Q7L3S4 317 aaPredicted RBP6.78□□□□□ -1.32
SDR42E1-201ENST00000328945 GOLGA6L4A6NEF3 574 aa6.78□□□□□ -1.32
SDR42E1-201ENST00000328945 TPRNQ4KMQ1 711 aa6.78□□□□□ -1.32
SDR42E1-201ENST00000328945 CALRP27797 417 aaKnown RBP6.77□□□□□ -1.33
SDR42E1-201ENST00000328945 SENP3-EIF4A1A0A087X0R7 540 aa6.77□□□□□ -1.33
SDR42E1-201ENST00000328945 PHF14O94880 888 aa6.77□□□□□ -1.33
SDR42E1-201ENST00000328945 SPRYD3Q8NCJ5 442 aa6.77□□□□□ -1.33
SDR42E1-201ENST00000328945 CLSTN1O94985 981 aa6.77□□□□□ -1.33
SDR42E1-201ENST00000328945 CSPP1Q1MSJ5 1256 aa6.76□□□□□ -1.33
SDR42E1-201ENST00000328945 TNIKQ9UKE5 1360 aa6.76□□□□□ -1.33
SDR42E1-201ENST00000328945 TPM2P07951 284 aa6.76□□□□□ -1.33
SDR42E1-201ENST00000328945 CCDC9Q9Y3X0 531 aaKnown RBP6.75□□□□□ -1.33
SDR42E1-201ENST00000328945 BAZ1AQ9NRL2 1556 aaPredicted RBP6.75□□□□□ -1.33
SDR42E1-201ENST00000328945 KNSTRNQ9Y448 316 aa6.75□□□□□ -1.33
SDR42E1-201ENST00000328945 BAZ1BQ9UIG0 1483 aaKnown RBP6.75□□□□□ -1.33
SDR42E1-201ENST00000328945 SKOR2Q2VWA4 1001 aaPredicted RBP6.75□□□□□ -1.33
SDR42E1-201ENST00000328945 CFAP53Q96M91 514 aa6.75□□□□□ -1.33
SDR42E1-201ENST00000328945 MCCP23508 829 aa6.75□□□□□ -1.33
SDR42E1-201ENST00000328945 UBE2Q2Q8WVN8 375 aa6.75□□□□□ -1.33
SDR42E1-201ENST00000328945 FAM13BQ9NYF5 915 aa6.75□□□□□ -1.33
SDR42E1-201ENST00000328945 RRP9O43818 475 aaKnown RBP6.75□□□□□ -1.33
SDR42E1-201ENST00000328945 FAM43AQ8N2R8 423 aa6.74□□□□□ -1.33
SDR42E1-201ENST00000328945 APPP05067 770 aa6.74□□□□□ -1.33
SDR42E1-201ENST00000328945 OS9Q13438 667 aaPredicted RBP6.74□□□□□ -1.33
SDR42E1-201ENST00000328945 CEP164Q9UPV0 1460 aa6.74□□□□□ -1.33
SDR42E1-201ENST00000328945 CDCA8Q53HL2 280 aa6.73□□□□□ -1.33
SDR42E1-201ENST00000328945 CFDP1Q9UEE9 299 aaPredicted RBP6.73□□□□□ -1.33
SDR42E1-201ENST00000328945 NAP1L2Q9ULW6 460 aaPredicted RBP6.73□□□□□ -1.33
SDR42E1-201ENST00000328945 PAK3O75914 559 aaPredicted RBP6.73□□□□□ -1.33
SDR42E1-201ENST00000328945 RCAN3Q9UKA8 241 aa6.73□□□□□ -1.33
SDR42E1-201ENST00000328945 FRAT1Q92837 279 aaPredicted RBP6.73□□□□□ -1.33
SDR42E1-201ENST00000328945 NOM1Q5C9Z4 860 aaKnown RBP6.73□□□□□ -1.33
SDR42E1-201ENST00000328945 GON4LQ3T8J9 2241 aa6.72□□□□□ -1.33
SDR42E1-201ENST00000328945 TEX35Q5T0J7 233 aa6.72□□□□□ -1.33
SDR42E1-201ENST00000328945 SAFB2Q14151 953 aaKnown RBP eCLIP6.72□□□□□ -1.33
SDR42E1-201ENST00000328945 BICRAQ9NZM4 1560 aa6.72□□□□□ -1.33
SDR42E1-201ENST00000328945 CCDC66A2RUB6 948 aa6.72□□□□□ -1.33
SDR42E1-201ENST00000328945 NUDCQ9Y266 331 aa6.72□□□□□ -1.33
SDR42E1-201ENST00000328945 KANK1Q14678 1352 aa6.71□□□□□ -1.34
SDR42E1-201ENST00000328945 HTATSF1O43719 755 aaKnown RBP6.71□□□□□ -1.34
SDR42E1-201ENST00000328945 CSB-PGBD3P0DP91 1061 aa6.71□□□□□ -1.34
SDR42E1-201ENST00000328945 CALD1Q05682 793 aaKnown RBP6.71□□□□□ -1.34
SDR42E1-201ENST00000328945 TAF3Q5VWG9 929 aa6.71□□□□□ -1.34
SDR42E1-201ENST00000328945 ZNF330Q9Y3S2 320 aaPredicted RBP6.71□□□□□ -1.34
SDR42E1-201ENST00000328945 UNC13AQ9UPW8 1703 aa6.71□□□□□ -1.34
SDR42E1-201ENST00000328945 FGD1P98174 961 aa6.71□□□□□ -1.34
SDR42E1-201ENST00000328945 PDE4AP27815 886 aa6.7□□□□□ -1.34
SDR42E1-201ENST00000328945 KRI1Q8N9T8 703 aaKnown RBP6.7□□□□□ -1.34
SDR42E1-201ENST00000328945 KTN1Q86UP2 1357 aaKnown RBP6.7□□□□□ -1.34
SDR42E1-201ENST00000328945 GPS2Q13227 327 aa6.7□□□□□ -1.34
SDR42E1-201ENST00000328945 RWDD1Q9H446 243 aaPredicted RBP6.7□□□□□ -1.34
SDR42E1-201ENST00000328945 CCNB3Q8WWL7 1395 aa6.7□□□□□ -1.34
SDR42E1-201ENST00000328945 PRM3Q9NNZ6 103 aa6.7□□□□□ -1.34
SDR42E1-201ENST00000328945 STK26Q9P289 416 aa6.7□□□□□ -1.34
SDR42E1-201ENST00000328945 NEUROD2Q15784 382 aa6.7□□□□□ -1.34
SDR42E1-201ENST00000328945 BRPF3Q9ULD4 1205 aa6.7□□□□□ -1.34
SDR42E1-201ENST00000328945 FAM161AQ3B820 660 aa6.69□□□□□ -1.34
SDR42E1-201ENST00000328945 KIF16BQ96L93 1317 aa6.69□□□□□ -1.34
SDR42E1-201ENST00000328945 MAPK8IP3Q9UPT6 1336 aa6.69□□□□□ -1.34
SDR42E1-201ENST00000328945 U2SURPO15042 1029 aaKnown RBP6.69□□□□□ -1.34
SDR42E1-201ENST00000328945 TMX4Q9H1E5 349 aaPredicted RBP6.69□□□□□ -1.34
SDR42E1-201ENST00000328945 CFAP65Q6ZU64 1925 aaKnown RBP6.69□□□□□ -1.34
SDR42E1-201ENST00000328945 NOC3LQ8WTT2 800 aaKnown RBP6.69□□□□□ -1.34
SDR42E1-201ENST00000328945 CECR2Q9BXF3 1484 aa6.69□□□□□ -1.34
SDR42E1-201ENST00000328945 CWC15Q9P013 229 aaKnown RBP6.68□□□□□ -1.34
SDR42E1-201ENST00000328945 HDGFP51858 240 aaKnown RBP6.68□□□□□ -1.34
SDR42E1-201ENST00000328945 KCNJ4P48050 445 aa6.68□□□□□ -1.34
SDR42E1-201ENST00000328945 TPM4P67936 248 aa6.68□□□□□ -1.34
SDR42E1-201ENST00000328945 IL27Q8NEV9 243 aa6.68□□□□□ -1.34
SDR42E1-201ENST00000328945 ZBED9Q6R2W3 1325 aa6.68□□□□□ -1.34
SDR42E1-201ENST00000328945 SRPK2P78362 688 aaKnown RBP6.68□□□□□ -1.34
SDR42E1-201ENST00000328945 CARD11Q9BXL7 1154 aa6.68□□□□□ -1.34
SDR42E1-201ENST00000328945 SETD5Q9C0A6 1442 aa6.67□□□□□ -1.34
SDR42E1-201ENST00000328945 MEX3CQ5U5Q3 659 aaKnown RBP6.67□□□□□ -1.34
SDR42E1-201ENST00000328945 PRDM2Q13029 1718 aa6.67□□□□□ -1.34
SDR42E1-201ENST00000328945 PHF23Q9BUL5 403 aaPredicted RBP6.67□□□□□ -1.34
SDR42E1-201ENST00000328945 MFAP1P55081 439 aaKnown RBP6.67□□□□□ -1.34
SDR42E1-201ENST00000328945 PDE3BQ13370 1112 aa6.67□□□□□ -1.34
SDR42E1-201ENST00000328945 MROH2BQ7Z745 1585 aa6.66□□□□□ -1.34
SDR42E1-201ENST00000328945 MRE11P49959 708 aa6.66□□□□□ -1.34
SDR42E1-201ENST00000328945 GGT6Q6P531 493 aa6.66□□□□□ -1.34
SDR42E1-201ENST00000328945 PMFBP1Q8TBY8 1022 aa6.66□□□□□ -1.34
SDR42E1-201ENST00000328945 SMARCA4P51532 1647 aa6.66□□□□□ -1.34
SDR42E1-201ENST00000328945 CENPQQ7L2Z9 268 aaPredicted RBP6.66□□□□□ -1.34
SDR42E1-201ENST00000328945 PHLDB1Q86UU1 1377 aa6.66□□□□□ -1.34
SDR42E1-201ENST00000328945 RALBP1Q15311 655 aa6.66□□□□□ -1.34
SDR42E1-201ENST00000328945 SIN3AQ96ST3 1273 aa6.66□□□□□ -1.34
SDR42E1-201ENST00000328945 CCDC39Q9UFE4 941 aa6.65□□□□□ -1.34
SDR42E1-201ENST00000328945 VPS8Q8N3P4 1428 aa6.65□□□□□ -1.34
SDR42E1-201ENST00000328945 NFKBIBQ15653 356 aa6.65□□□□□ -1.34
SDR42E1-201ENST00000328945 PEG3Q9GZU2 1588 aa6.65□□□□□ -1.34
SDR42E1-201ENST00000328945 KIF27Q86VH2 1401 aa6.65□□□□□ -1.35
SDR42E1-201ENST00000328945 DDX49Q9Y6V7 483 aaKnown RBP6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms