RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 RRP7BPQ9NSQ0 103 aa21.88■■□□□ 1.09
TPM3-205ENST00000328159 UHRF1BP1LA0JNW5 1464 aa21.87■■□□□ 1.09
TPM3-205ENST00000328159 ROCK1Q13464 1354 aa21.86■■□□□ 1.09
TPM3-205ENST00000328159 ZNF777Q9ULD5 760 aaPredicted RBP21.82■■□□□ 1.08
TPM3-205ENST00000328159 ZCCHC11Q5TAX3 1644 aaKnown RBP21.82■■□□□ 1.08
TPM3-205ENST00000328159 CROCC2H7BZ55 1655 aa21.82■■□□□ 1.08
TPM3-205ENST00000328159 ZNF316A6NFI3 1004 aaPredicted RBP21.81■■□□□ 1.08
TPM3-205ENST00000328159 KDM6BO15054 1643 aa21.81■■□□□ 1.08
TPM3-205ENST00000328159 ADGBQ8N7X0 1667 aa21.81■■□□□ 1.08
TPM3-205ENST00000328159 PREX2Q70Z35 1606 aa21.79■■□□□ 1.08
TPM3-205ENST00000328159 KDM5BQ9UGL1 1544 aa21.79■■□□□ 1.08
TPM3-205ENST00000328159 CDC42BPBQ9Y5S2 1711 aa21.77■■□□□ 1.08
TPM3-205ENST00000328159 OSCARQ8IYS5 282 aa21.76■■□□□ 1.07
TPM3-205ENST00000328159 TTC37Q6PGP7 1564 aa21.75■■□□□ 1.07
TPM3-205ENST00000328159 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.75■■□□□ 1.073e-7■□□□□ 8.5
TPM3-205ENST00000328159 ADGRL2O95490 1459 aa21.74■■□□□ 1.07
TPM3-205ENST00000328159 SIN3AQ96ST3 1273 aa21.74■■□□□ 1.07
TPM3-205ENST00000328159 ACIN1Q9UKV3 1341 aaKnown RBP21.72■■□□□ 1.07
TPM3-205ENST00000328159 SHANK2Q9UPX8 1470 aa21.71■■□□□ 1.07
TPM3-205ENST00000328159 ARHGEF5Q12774 1597 aa21.71■■□□□ 1.07
TPM3-205ENST00000328159 MYO5CQ9NQX4 1742 aa21.71■■□□□ 1.07
TPM3-205ENST00000328159 SAMD9LQ8IVG5 1584 aa21.71■■□□□ 1.07
TPM3-205ENST00000328159 NCOA1Q15788 1441 aa21.7■■□□□ 1.06
TPM3-205ENST00000328159 NEUROD1Q13562 356 aa21.7■■□□□ 1.06
TPM3-205ENST00000328159 TRIM52Q96A61 297 aa21.7■■□□□ 1.06
TPM3-205ENST00000328159 TIMELESSQ9UNS1 1208 aa21.69■■□□□ 1.06
TPM3-205ENST00000328159 ANKRD30AQ9BXX3 1397 aa21.67■■□□□ 1.06
TPM3-205ENST00000328159 ARHGAP5Q13017 1502 aa21.67■■□□□ 1.06
TPM3-205ENST00000328159 DIEXFQ68CQ4 756 aaKnown RBP21.66■■□□□ 1.06
TPM3-205ENST00000328159 MBD5Q9P267 1494 aa21.66■■□□□ 1.06
TPM3-205ENST00000328159 KCNH8Q96L42 1107 aa21.66■■□□□ 1.06
TPM3-205ENST00000328159 C9orf84Q5VXU9 1444 aa21.65■■□□□ 1.06
TPM3-205ENST00000328159 DENND4BO75064 1496 aaPredicted RBP21.65■■□□□ 1.06
TPM3-205ENST00000328159 HNRNPMP52272 730 aaKnown RBP eCLIP21.64■■□□□ 1.057e-7■■■□□ 16.5
TPM3-205ENST00000328159 CCDC141Q6ZP82 1450 aa21.63■■□□□ 1.05
TPM3-205ENST00000328159 MPHOSPH9Q99550 1183 aa21.62■■□□□ 1.05
TPM3-205ENST00000328159 TSPY4P0CV99 314 aa21.61■■□□□ 1.05
TPM3-205ENST00000328159 TSPY10P0CW01 314 aa21.61■■□□□ 1.05
TPM3-205ENST00000328159 RSPH4AQ5TD94 716 aa21.6■■□□□ 1.05
TPM3-205ENST00000328159 SYCP2Q9BX26 1530 aa21.6■■□□□ 1.05
TPM3-205ENST00000328159 PLEKHH2Q8IVE3 1493 aa21.6■■□□□ 1.05
TPM3-205ENST00000328159 PLCH2O75038 1416 aa21.59■■□□□ 1.05
TPM3-205ENST00000328159 WDR7Q9Y4E6 1490 aa21.58■■□□□ 1.05
TPM3-205ENST00000328159 ANKRD50Q9ULJ7 1429 aa21.57■■□□□ 1.04
TPM3-205ENST00000328159 KIAA1107Q9UPP5 1409 aa21.57■■□□□ 1.04
TPM3-205ENST00000328159 TONSLQ96HA7 1378 aa21.57■■□□□ 1.04
TPM3-205ENST00000328159 MAST1Q9Y2H9 1570 aa21.56■■□□□ 1.04
TPM3-205ENST00000328159 PZPP20742 1482 aa21.54■■□□□ 1.04
TPM3-205ENST00000328159 ARAP3Q8WWN8 1544 aa21.54■■□□□ 1.04
TPM3-205ENST00000328159 PPP1R15AO75807 674 aaPredicted RBP21.53■■□□□ 1.04
TPM3-205ENST00000328159 EFCAB2Q5VUJ9 269 aa21.53■■□□□ 1.04
TPM3-205ENST00000328159 KIF15Q9NS87 1388 aa21.52■■□□□ 1.04
TPM3-205ENST00000328159 SLC4A1APQ9BWU0 796 aaKnown RBP21.51■■□□□ 1.03
TPM3-205ENST00000328159 ABCA9Q8IUA7 1624 aa21.5■■□□□ 1.03
TPM3-205ENST00000328159 ARHGEF12Q9NZN5 1544 aa21.5■■□□□ 1.03
TPM3-205ENST00000328159 ASXL2Q76L83 1435 aa21.5■■□□□ 1.03
TPM3-205ENST00000328159 ABCC1P33527 1531 aa21.49■■□□□ 1.03
TPM3-205ENST00000328159 ANKRD30BQ9BXX2 1392 aa21.48■■□□□ 1.03
TPM3-205ENST00000328159 FOXD1Q16676 465 aa21.48■■□□□ 1.03
TPM3-205ENST00000328159 PLXNC1O60486 1568 aa21.46■■□□□ 1.03
TPM3-205ENST00000328159 KDM5DQ9BY66 1539 aa21.46■■□□□ 1.03
TPM3-205ENST00000328159 NPM1P06748 294 aaKnown RBP eCLIP21.45■■□□□ 1.02
TPM3-205ENST00000328159 RPRD2Q5VT52 1461 aaKnown RBP21.42■■□□□ 1.02
TPM3-205ENST00000328159 NUP155O75694 1391 aa21.41■■□□□ 1.02
TPM3-205ENST00000328159 TRAPPC8Q9Y2L5 1435 aa21.4■■□□□ 1.02
TPM3-205ENST00000328159 FANCAO15360 1455 aa21.38■■□□□ 1.01
TPM3-205ENST00000328159 PKD2Q13563 968 aa21.38■■□□□ 1.01
TPM3-205ENST00000328159 DUOX2Q9NRD8 1548 aa21.37■■□□□ 1.01
TPM3-205ENST00000328159 UNC13BO14795 1591 aa21.36■■□□□ 1.01
TPM3-205ENST00000328159 RTEL1-TNFRSF6BF6WH68 1400 aa21.33■■□□□ 1.01
TPM3-205ENST00000328159 TEX14Q8IWB6 1497 aa21.33■■□□□ 1
TPM3-205ENST00000328159 L3MBTL2Q969R5 705 aa21.33■■□□□ 1
TPM3-205ENST00000328159 ERBINQ96RT1 1412 aa21.32■■□□□ 1
TPM3-205ENST00000328159 ZFYVE16Q7Z3T8 1539 aa21.31■■□□□ 1
TPM3-205ENST00000328159 FAM135AQ9P2D6 1515 aa21.31■■□□□ 1
TPM3-205ENST00000328159 SPAG9O60271 1321 aaKnown RBP21.31■■□□□ 1
TPM3-205ENST00000328159 ADGRL1O94910 1474 aa21.31■■□□□ 1
TPM3-205ENST00000328159 AFAP1Q8N556 730 aa21.29■■□□□ 1
TPM3-205ENST00000328159 RIMBP3CA6NJZ7 1639 aa21.29■■□□□ 1
TPM3-205ENST00000328159 RIMBP3BA6NNM3 1639 aa21.29■■□□□ 1
TPM3-205ENST00000328159 RIMBP3Q9UFD9 1639 aa21.29■■□□□ 1
TPM3-205ENST00000328159 MIER1Q8N108 512 aa21.28■■□□□ 1
TPM3-205ENST00000328159 SCAPERQ9BY12 1400 aa21.28■■□□□ 1
TPM3-205ENST00000328159 INO80Q9ULG1 1556 aaPredicted RBP21.28■■□□□ 1
TPM3-205ENST00000328159 IQGAP3Q86VI3 1631 aa21.27■■□□□ 1
TPM3-205ENST00000328159 CFAP74Q9C0B2 1584 aa21.27■□□□□ 0.99
TPM3-205ENST00000328159 MAGI2Q86UL8 1455 aa21.26■□□□□ 0.99
TPM3-205ENST00000328159 CD109Q6YHK3 1445 aa21.25■□□□□ 0.99
TPM3-205ENST00000328159 ATP7AQ04656 1500 aa21.25■□□□□ 0.99
TPM3-205ENST00000328159 CYB5RLQ6IPT4 315 aa21.22■□□□□ 0.99
TPM3-205ENST00000328159 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.22■□□□□ 0.995e-9■■■■■ 28.2
TPM3-205ENST00000328159 HIRIP3Q9BW71 556 aaPredicted RBP21.2■□□□□ 0.98
TPM3-205ENST00000328159 NBPF8Q3BBV2 869 aa21.18■□□□□ 0.98
TPM3-205ENST00000328159 ZNF518AQ6AHZ1 1483 aa21.17■□□□□ 0.98
TPM3-205ENST00000328159 DEPDC5O75140 1603 aa21.16■□□□□ 0.98
TPM3-205ENST00000328159 KIDINS220Q9ULH0 1771 aa21.15■□□□□ 0.98
TPM3-205ENST00000328159 EIF2AK4Q9P2K8 1649 aaKnown RBP21.14■□□□□ 0.97
TPM3-205ENST00000328159 MYT1LQ9UL68 1186 aa21.14■□□□□ 0.97
TPM3-205ENST00000328159 POGZQ7Z3K3 1410 aa21.13■□□□□ 0.97
TPM3-205ENST00000328159 KDM5CP41229 1560 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms