RNA–Protein interactions for RNA: ENST00000325327.3

LMNB2-201, Transcript of lamin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB2, Length 4,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-201ENST00000325327 LAMC3Q9Y6N6 1575 aa22.57■■□□□ 1.2
LMNB2-201ENST00000325327 GTF3C3Q9Y5Q9 886 aa22.56■■□□□ 1.2
LMNB2-201ENST00000325327 ZBTB47Q9UFB7 747 aaPredicted RBP22.56■■□□□ 1.2
LMNB2-201ENST00000325327 DNMBPQ6XZF7 1577 aa22.55■■□□□ 1.2
LMNB2-201ENST00000325327 ZNF608Q9ULD9 1512 aaPredicted RBP22.53■■□□□ 1.2
LMNB2-201ENST00000325327 TOP2BQ02880 1626 aa22.52■■□□□ 1.2
LMNB2-201ENST00000325327 CDCA8Q53HL2 280 aa22.52■■□□□ 1.2
LMNB2-201ENST00000325327 NUTM2FA1L443 756 aa22.51■■□□□ 1.19
LMNB2-201ENST00000325327 PRDM2Q13029 1718 aa22.5■■□□□ 1.19
LMNB2-201ENST00000325327 URB2Q14146 1524 aaKnown RBP22.5■■□□□ 1.19
LMNB2-201ENST00000325327 CC2D1BQ5T0F9 858 aaKnown RBP22.49■■□□□ 1.19
LMNB2-201ENST00000325327 L3MBTL2Q969R5 705 aa22.48■■□□□ 1.19
LMNB2-201ENST00000325327 NEUROD2Q15784 382 aa22.47■■□□□ 1.19
LMNB2-201ENST00000325327 ARAP1Q96P48 1450 aa22.47■■□□□ 1.19
LMNB2-201ENST00000325327 PRXQ9BXM0 1461 aa22.45■■□□□ 1.18
LMNB2-201ENST00000325327 RAPGEF3O95398 923 aa22.43■■□□□ 1.18
LMNB2-201ENST00000325327 PHLDB1Q86UU1 1377 aa22.42■■□□□ 1.18
LMNB2-201ENST00000325327 TMF1P82094 1093 aa22.42■■□□□ 1.18
LMNB2-201ENST00000325327 KIF21BO75037 1637 aa22.42■■□□□ 1.18
LMNB2-201ENST00000325327 EID1Q9Y6B2 187 aa22.41■■□□□ 1.18
LMNB2-201ENST00000325327 HSPA5P11021 654 aaKnown RBP22.4■■□□□ 1.18
LMNB2-201ENST00000325327 ABCA10Q8WWZ4 1543 aa22.39■■□□□ 1.17
LMNB2-201ENST00000325327 PAK3O75914 559 aaPredicted RBP22.38■■□□□ 1.17
LMNB2-201ENST00000325327 MYT1Q01538 1121 aa22.38■■□□□ 1.17
LMNB2-201ENST00000325327 TRAK1Q9UPV9 953 aa22.37■■□□□ 1.17
LMNB2-201ENST00000325327 PEG3Q9GZU2 1588 aa22.37■■□□□ 1.17
LMNB2-201ENST00000325327 SYNJ2O15056 1496 aa22.36■■□□□ 1.17
LMNB2-201ENST00000325327 CFAP53Q96M91 514 aa22.35■■□□□ 1.17
LMNB2-201ENST00000325327 U2SURPO15042 1029 aaKnown RBP22.34■■□□□ 1.17
LMNB2-201ENST00000325327 ROCK2O75116 1388 aaKnown RBP22.32■■□□□ 1.16
LMNB2-201ENST00000325327 CASKIN1Q8WXD9 1431 aa22.32■■□□□ 1.16
LMNB2-201ENST00000325327 FKBP8Q14318 412 aa22.31■■□□□ 1.16
LMNB2-201ENST00000325327 ARXQ96QS3 562 aa22.31■■□□□ 1.16
LMNB2-201ENST00000325327 KIF15Q9NS87 1388 aa22.31■■□□□ 1.16
LMNB2-201ENST00000325327 IRX6P78412 446 aaPredicted RBP22.31■■□□□ 1.16
LMNB2-201ENST00000325327 NPM2Q86SE8 214 aaKnown RBP22.31■■□□□ 1.16
LMNB2-201ENST00000325327 KIAA0586Q9BVV6 1533 aa22.3■■□□□ 1.16
LMNB2-201ENST00000325327 FGD6Q6ZV73 1430 aa22.29■■□□□ 1.16
LMNB2-201ENST00000325327 MYOM3Q5VTT5 1437 aa22.29■■□□□ 1.16
LMNB2-201ENST00000325327 TIMELESSQ9UNS1 1208 aa22.28■■□□□ 1.16
LMNB2-201ENST00000325327 LRRC9Q6ZRR7 1453 aa22.27■■□□□ 1.16
LMNB2-201ENST00000325327 ERICH3Q5RHP9 1530 aa22.27■■□□□ 1.16
LMNB2-201ENST00000325327 LAS1LQ9Y4W2 734 aaKnown RBP22.27■■□□□ 1.16
LMNB2-201ENST00000325327 NCOA2Q15596 1464 aa22.27■■□□□ 1.16
LMNB2-201ENST00000325327 CCDC144AA2RUR9 1427 aa22.24■■□□□ 1.15
LMNB2-201ENST00000325327 ARHGAP5Q13017 1502 aa22.23■■□□□ 1.15
LMNB2-201ENST00000325327 GRIN2AQ12879 1464 aa22.23■■□□□ 1.15
LMNB2-201ENST00000325327 SCAPERQ9BY12 1400 aa22.23■■□□□ 1.15
LMNB2-201ENST00000325327 PLB1Q6P1J6 1458 aa22.22■■□□□ 1.15
LMNB2-201ENST00000325327 MORC1Q86VD1 984 aa22.22■■□□□ 1.15
LMNB2-201ENST00000325327 AEBP2Q6ZN18 517 aaPredicted RBP22.21■■□□□ 1.15
LMNB2-201ENST00000325327 UACAQ9BZF9 1416 aa22.2■■□□□ 1.14
LMNB2-201ENST00000325327 NUDCQ9Y266 331 aa22.19■■□□□ 1.14
LMNB2-201ENST00000325327 ST20-MTHFSA0A0A6YYL1 179 aa22.18■■□□□ 1.14
LMNB2-201ENST00000325327 NGDNQ8NEJ9 315 aaKnown RBP22.18■■□□□ 1.14
LMNB2-201ENST00000325327 MAPK8IP3Q9UPT6 1336 aa22.17■■□□□ 1.14
LMNB2-201ENST00000325327 HDGFL2Q7Z4V5 671 aaPredicted RBP22.17■■□□□ 1.14
LMNB2-201ENST00000325327 VGFO15240 615 aaPredicted RBP22.16■■□□□ 1.14
LMNB2-201ENST00000325327 ANKRD50Q9ULJ7 1429 aa22.15■■□□□ 1.14
LMNB2-201ENST00000325327 CDK13Q14004 1512 aaKnown RBP22.15■■□□□ 1.14
LMNB2-201ENST00000325327 DHX57Q6P158 1386 aaKnown RBP22.15■■□□□ 1.14
LMNB2-201ENST00000325327 MAGI1Q96QZ7 1491 aaPredicted RBP22.15■■□□□ 1.14
LMNB2-201ENST00000325327 TROQ12816 1431 aaPredicted RBP22.14■■□□□ 1.13
LMNB2-201ENST00000325327 MINK1Q8N4C8 1332 aaPredicted RBP22.13■■□□□ 1.13
LMNB2-201ENST00000325327 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.13■■□□□ 1.13
LMNB2-201ENST00000325327 FYCO1Q9BQS8 1478 aa22.11■■□□□ 1.13
LMNB2-201ENST00000325327 IQGAP2Q13576 1575 aa22.1■■□□□ 1.13
LMNB2-201ENST00000325327 TMEM132EQ6IEE7 984 aa22.08■■□□□ 1.13
LMNB2-201ENST00000325327 CSB-PGBD3P0DP91 1061 aa22.08■■□□□ 1.13
LMNB2-201ENST00000325327 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.06■■□□□ 1.12
LMNB2-201ENST00000325327 CCDC136Q96JN2 1154 aa22.05■■□□□ 1.12
LMNB2-201ENST00000325327 EFCAB5A4FU69 1503 aa22.05■■□□□ 1.12
LMNB2-201ENST00000325327 LTV1Q96GA3 475 aaPredicted RBP22.04■■□□□ 1.12
LMNB2-201ENST00000325327 CCDC9Q9Y3X0 531 aaKnown RBP22.04■■□□□ 1.12
LMNB2-201ENST00000325327 ARHGEF11O15085 1522 aa22.02■■□□□ 1.12
LMNB2-201ENST00000325327 EPRSP07814 1512 aaKnown RBP22.02■■□□□ 1.12
LMNB2-201ENST00000325327 CD109Q6YHK3 1445 aa22.01■■□□□ 1.11
LMNB2-201ENST00000325327 U2AF1L5P0DN76 240 aaPredicted RBP22.01■■□□□ 1.11
LMNB2-201ENST00000325327 U2AF1Q01081 240 aaKnown RBP eCLIP22.01■■□□□ 1.11
LMNB2-201ENST00000325327 TERF2IPQ9NYB0 399 aa22■■□□□ 1.11
LMNB2-201ENST00000325327 TXNDC2Q86VQ3 553 aa21.98■■□□□ 1.11
LMNB2-201ENST00000325327 FRAT1Q92837 279 aaPredicted RBP21.97■■□□□ 1.11
LMNB2-201ENST00000325327 C9orf84Q5VXU9 1444 aa21.97■■□□□ 1.11
LMNB2-201ENST00000325327 EIF3AQ14152 1382 aaKnown RBP21.96■■□□□ 1.11
LMNB2-201ENST00000325327 CFAP70Q5T0N1 1121 aa21.95■■□□□ 1.11
LMNB2-201ENST00000325327 SLC26A8Q96RN1 970 aa21.93■■□□□ 1.1
LMNB2-201ENST00000325327 PANK3Q9H999 370 aa21.92■■□□□ 1.1
LMNB2-201ENST00000325327 SUPT16HQ9Y5B9 1047 aaKnown RBP21.92■■□□□ 1.1
LMNB2-201ENST00000325327 KTN1Q86UP2 1357 aaKnown RBP21.92■■□□□ 1.1
LMNB2-201ENST00000325327 CEBPAP49715 358 aaPredicted RBP21.92■■□□□ 1.1
LMNB2-201ENST00000325327 AMPHP49418 695 aa21.9■■□□□ 1.1
LMNB2-201ENST00000325327 CUL7Q14999 1698 aa21.89■■□□□ 1.09
LMNB2-201ENST00000325327 HECW1Q76N89 1606 aa21.88■■□□□ 1.09
LMNB2-201ENST00000325327 NPHP1O15259 732 aa21.87■■□□□ 1.09
LMNB2-201ENST00000325327 ZNF330Q9Y3S2 320 aaPredicted RBP21.86■■□□□ 1.09
LMNB2-201ENST00000325327 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.86■■□□□ 1.09
LMNB2-201ENST00000325327 USP47Q96K76 1375 aa21.86■■□□□ 1.09
LMNB2-201ENST00000325327 FTSJ3Q8IY81 847 aaKnown RBP21.85■■□□□ 1.09
LMNB2-201ENST00000325327 RTF1Q92541 710 aaKnown RBP21.85■■□□□ 1.09
LMNB2-201ENST00000325327 EHBP1L1Q8N3D4 1523 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms