RNA–Protein interactions for RNA: ENST00000324894.12

GTPBP3-201, Transcript of GTP binding protein 3, mitochondrial, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTPBP3, Length 2,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-201ENST00000324894 KDM6BO15054 1643 aa24.63■■□□□ 1.53
GTPBP3-201ENST00000324894 ROCK1Q13464 1354 aa24.63■■□□□ 1.53
GTPBP3-201ENST00000324894 ABCC5O15440 1437 aa24.63■■□□□ 1.53
GTPBP3-201ENST00000324894 ABCC10Q5T3U5 1492 aa24.63■■□□□ 1.53
GTPBP3-201ENST00000324894 PLEKHD1A6NEE1 506 aa24.61■■□□□ 1.53
GTPBP3-201ENST00000324894 CHIC2Q9UKJ5 165 aa24.61■■□□□ 1.53
GTPBP3-201ENST00000324894 RRP7BPQ9NSQ0 103 aa24.61■■□□□ 1.53
GTPBP3-201ENST00000324894 ZNF644Q9H582 1327 aaPredicted RBP24.59■■□□□ 1.53
GTPBP3-201ENST00000324894 CFDP1Q9UEE9 299 aaPredicted RBP24.57■■□□□ 1.52
GTPBP3-201ENST00000324894 TIMELESSQ9UNS1 1208 aa24.57■■□□□ 1.52
GTPBP3-201ENST00000324894 ABCC2Q92887 1545 aa24.57■■□□□ 1.52
GTPBP3-201ENST00000324894 ACIN1Q9UKV3 1341 aaKnown RBP24.57■■□□□ 1.52
GTPBP3-201ENST00000324894 SIN3AQ96ST3 1273 aa24.56■■□□□ 1.52
GTPBP3-201ENST00000324894 NEUROD1Q13562 356 aa24.55■■□□□ 1.52
GTPBP3-201ENST00000324894 PREX2Q70Z35 1606 aa24.52■■□□□ 1.52
GTPBP3-201ENST00000324894 ADGRL2O95490 1459 aa24.5■■□□□ 1.51
GTPBP3-201ENST00000324894 CDC42BPBQ9Y5S2 1711 aa24.49■■□□□ 1.51
GTPBP3-201ENST00000324894 DENND4BO75064 1496 aaPredicted RBP24.48■■□□□ 1.51
GTPBP3-201ENST00000324894 SHANK2Q9UPX8 1470 aa24.46■■□□□ 1.51
GTPBP3-201ENST00000324894 UHRF1BP1LA0JNW5 1464 aa24.45■■□□□ 1.5
GTPBP3-201ENST00000324894 GTF3C3Q9Y5Q9 886 aa24.45■■□□□ 1.5
GTPBP3-201ENST00000324894 ZCCHC11Q5TAX3 1644 aaKnown RBP24.44■■□□□ 1.5
GTPBP3-201ENST00000324894 ARHGEF5Q12774 1597 aa24.44■■□□□ 1.5
GTPBP3-201ENST00000324894 ZNF777Q9ULD5 760 aaPredicted RBP24.44■■□□□ 1.5
GTPBP3-201ENST00000324894 NCOA1Q15788 1441 aa24.43■■□□□ 1.5
GTPBP3-201ENST00000324894 TTC37Q6PGP7 1564 aa24.42■■□□□ 1.5
GTPBP3-201ENST00000324894 TRIM52Q96A61 297 aa24.42■■□□□ 1.5
GTPBP3-201ENST00000324894 MYO5CQ9NQX4 1742 aa24.41■■□□□ 1.5
GTPBP3-201ENST00000324894 TONSLQ96HA7 1378 aa24.41■■□□□ 1.5
GTPBP3-201ENST00000324894 SAMD9LQ8IVG5 1584 aa24.41■■□□□ 1.5
GTPBP3-201ENST00000324894 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.39■■□□□ 1.5
GTPBP3-201ENST00000324894 PPP1R15AO75807 674 aaPredicted RBP24.37■■□□□ 1.49
GTPBP3-201ENST00000324894 ANKRD30AQ9BXX3 1397 aa24.37■■□□□ 1.49
GTPBP3-201ENST00000324894 KDM5BQ9UGL1 1544 aa24.37■■□□□ 1.49
GTPBP3-201ENST00000324894 MPHOSPH9Q99550 1183 aa24.36■■□□□ 1.49
GTPBP3-201ENST00000324894 C9orf84Q5VXU9 1444 aa24.35■■□□□ 1.49
GTPBP3-201ENST00000324894 MBD5Q9P267 1494 aa24.32■■□□□ 1.48
GTPBP3-201ENST00000324894 ARHGAP5Q13017 1502 aa24.3■■□□□ 1.48
GTPBP3-201ENST00000324894 CCDC141Q6ZP82 1450 aa24.3■■□□□ 1.48
GTPBP3-201ENST00000324894 PZPP20742 1482 aa24.29■■□□□ 1.48
GTPBP3-201ENST00000324894 MIER1Q8N108 512 aa24.28■■□□□ 1.48
GTPBP3-201ENST00000324894 ANKRD50Q9ULJ7 1429 aa24.27■■□□□ 1.48
GTPBP3-201ENST00000324894 MAST1Q9Y2H9 1570 aa24.27■■□□□ 1.48
GTPBP3-201ENST00000324894 SYCP2Q9BX26 1530 aa24.26■■□□□ 1.47
GTPBP3-201ENST00000324894 ANKRD30BQ9BXX2 1392 aa24.24■■□□□ 1.47
GTPBP3-201ENST00000324894 PLEKHH2Q8IVE3 1493 aa24.24■■□□□ 1.47
GTPBP3-201ENST00000324894 TSPY4P0CV99 314 aa24.23■■□□□ 1.47
GTPBP3-201ENST00000324894 TSPY10P0CW01 314 aa24.23■■□□□ 1.47
GTPBP3-201ENST00000324894 HNRNPMP52272 730 aaKnown RBP eCLIP24.22■■□□□ 1.47
GTPBP3-201ENST00000324894 RSPH4AQ5TD94 716 aa24.22■■□□□ 1.47
GTPBP3-201ENST00000324894 KDM5DQ9BY66 1539 aa24.22■■□□□ 1.47
GTPBP3-201ENST00000324894 RPRD2Q5VT52 1461 aaKnown RBP24.22■■□□□ 1.47
GTPBP3-201ENST00000324894 SLC4A1APQ9BWU0 796 aaKnown RBP24.21■■□□□ 1.47
GTPBP3-201ENST00000324894 KIAA1107Q9UPP5 1409 aa24.19■■□□□ 1.46
GTPBP3-201ENST00000324894 KIF15Q9NS87 1388 aa24.19■■□□□ 1.46
GTPBP3-201ENST00000324894 FOXD1Q16676 465 aa24.18■■□□□ 1.46
GTPBP3-201ENST00000324894 PLXNC1O60486 1568 aa24.18■■□□□ 1.46
GTPBP3-201ENST00000324894 PLCH2O75038 1416 aa24.18■■□□□ 1.46
GTPBP3-201ENST00000324894 ARAP3Q8WWN8 1544 aa24.16■■□□□ 1.46
GTPBP3-201ENST00000324894 KCNH8Q96L42 1107 aa24.15■■□□□ 1.46
GTPBP3-201ENST00000324894 TEX14Q8IWB6 1497 aa24.14■■□□□ 1.46
GTPBP3-201ENST00000324894 ABCC1P33527 1531 aa24.14■■□□□ 1.45
GTPBP3-201ENST00000324894 WDR7Q9Y4E6 1490 aa24.13■■□□□ 1.45
GTPBP3-201ENST00000324894 CENPBP07199 599 aaPredicted RBP24.12■■□□□ 1.45
GTPBP3-201ENST00000324894 ARHGEF12Q9NZN5 1544 aa24.1■■□□□ 1.45
GTPBP3-201ENST00000324894 UNC13BO14795 1591 aa24.09■■□□□ 1.45
GTPBP3-201ENST00000324894 ABCA9Q8IUA7 1624 aa24.09■■□□□ 1.45
GTPBP3-201ENST00000324894 OSCARQ8IYS5 282 aa24.09■■□□□ 1.45
GTPBP3-201ENST00000324894 NUP155O75694 1391 aa24.07■■□□□ 1.44
GTPBP3-201ENST00000324894 L3MBTL2Q969R5 705 aa24.06■■□□□ 1.44
GTPBP3-201ENST00000324894 EFCAB2Q5VUJ9 269 aa24.06■■□□□ 1.44
GTPBP3-201ENST00000324894 PKD2Q13563 968 aa24.04■■□□□ 1.44
GTPBP3-201ENST00000324894 DUOX2Q9NRD8 1548 aa24.03■■□□□ 1.44
GTPBP3-201ENST00000324894 FAM135AQ9P2D6 1515 aa24.02■■□□□ 1.44
GTPBP3-201ENST00000324894 IQGAP3Q86VI3 1631 aa23.99■■□□□ 1.43
GTPBP3-201ENST00000324894 HIRIP3Q9BW71 556 aaPredicted RBP23.99■■□□□ 1.43
GTPBP3-201ENST00000324894 ASXL2Q76L83 1435 aa23.99■■□□□ 1.43
GTPBP3-201ENST00000324894 ERBINQ96RT1 1412 aa23.97■■□□□ 1.43
GTPBP3-201ENST00000324894 TRAPPC8Q9Y2L5 1435 aa23.97■■□□□ 1.43
GTPBP3-201ENST00000324894 DDX10Q13206 875 aaKnown RBP23.96■■□□□ 1.43
GTPBP3-201ENST00000324894 MAGI2Q86UL8 1455 aa23.95■■□□□ 1.42
GTPBP3-201ENST00000324894 YTHDC1Q96MU7 727 aaKnown RBP23.95■■□□□ 1.42
GTPBP3-201ENST00000324894 ZFYVE16Q7Z3T8 1539 aa23.94■■□□□ 1.42
GTPBP3-201ENST00000324894 FANCAO15360 1455 aa23.94■■□□□ 1.42
GTPBP3-201ENST00000324894 RTEL1-TNFRSF6BF6WH68 1400 aa23.92■■□□□ 1.42
GTPBP3-201ENST00000324894 INO80Q9ULG1 1556 aaPredicted RBP23.91■■□□□ 1.42
GTPBP3-201ENST00000324894 POLR1AO95602 1720 aaPredicted RBP23.91■■□□□ 1.42
GTPBP3-201ENST00000324894 NBPF8Q3BBV2 869 aa23.9■■□□□ 1.42
GTPBP3-201ENST00000324894 HSPA5P11021 654 aaKnown RBP23.89■■□□□ 1.42
GTPBP3-201ENST00000324894 EIF4G2P78344 907 aaKnown RBP eCLIP23.89■■□□□ 1.41
GTPBP3-201ENST00000324894 ATP7AQ04656 1500 aa23.86■■□□□ 1.41
GTPBP3-201ENST00000324894 CFAP74Q9C0B2 1584 aa23.85■■□□□ 1.41
GTPBP3-201ENST00000324894 ADGRL1O94910 1474 aa23.85■■□□□ 1.41
GTPBP3-201ENST00000324894 SPAG9O60271 1321 aaKnown RBP23.85■■□□□ 1.41
GTPBP3-201ENST00000324894 DEPDC5O75140 1603 aa23.84■■□□□ 1.41
GTPBP3-201ENST00000324894 NPM1P06748 294 aaKnown RBP eCLIP23.84■■□□□ 1.41
GTPBP3-201ENST00000324894 UHRF1BP1Q6BDS2 1440 aa23.83■■□□□ 1.41
GTPBP3-201ENST00000324894 SPATA31E1Q6ZUB1 1445 aa23.81■■□□□ 1.4
GTPBP3-201ENST00000324894 AFAP1Q8N556 730 aa23.8■■□□□ 1.4
GTPBP3-201ENST00000324894 EIF2AK4Q9P2K8 1649 aaKnown RBP23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms