RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 GBP4Q96PP9 640 aa26.68■■□□□ 1.86
RNF40-201ENST00000324685 SRPK2P78362 688 aaKnown RBP26.66■■□□□ 1.86
RNF40-201ENST00000324685 SPRYD3Q8NCJ5 442 aa26.66■■□□□ 1.86
RNF40-201ENST00000324685 RTF1Q92541 710 aaKnown RBP26.65■■□□□ 1.86
RNF40-201ENST00000324685 RBM19Q9Y4C8 960 aaKnown RBP26.64■■□□□ 1.86
RNF40-201ENST00000324685 HSPA5P11021 654 aaKnown RBP26.62■■□□□ 1.85
RNF40-201ENST00000324685 SETD5Q9C0A6 1442 aa26.62■■□□□ 1.85
RNF40-201ENST00000324685 KIAA1211Q6ZU35 1233 aa26.62■■□□□ 1.85
RNF40-201ENST00000324685 GNL2Q13823 731 aaKnown RBP26.62■■□□□ 1.85
RNF40-201ENST00000324685 CALD1Q05682 793 aaKnown RBP26.61■■□□□ 1.85
RNF40-201ENST00000324685 RWDD1Q9H446 243 aaPredicted RBP26.6■■□□□ 1.85
RNF40-201ENST00000324685 HTATSF1O43719 755 aaKnown RBP26.58■■□□□ 1.85
RNF40-201ENST00000324685 KIAA2012Q0VF49 1180 aa26.58■■□□□ 1.85
RNF40-201ENST00000324685 TCERG1O14776 1098 aaKnown RBP26.57■■□□□ 1.84
RNF40-201ENST00000324685 HDGFL2Q7Z4V5 671 aaPredicted RBP26.57■■□□□ 1.84
RNF40-201ENST00000324685 SYAP1Q96A49 352 aaPredicted RBP26.55■■□□□ 1.84
RNF40-201ENST00000324685 RALBP1Q15311 655 aa26.55■■□□□ 1.84
RNF40-201ENST00000324685 ARHGAP35Q9NRY4 1499 aa26.55■■□□□ 1.84
RNF40-201ENST00000324685 RCAN3Q9UKA8 241 aa26.54■■□□□ 1.84
RNF40-201ENST00000324685 CLSTN1O94985 981 aa26.53■■□□□ 1.84
RNF40-201ENST00000324685 EIF4G1Q04637 1599 aaKnown RBP26.53■■□□□ 1.84
RNF40-201ENST00000324685 PMFBP1Q8TBY8 1022 aa26.5■■□□□ 1.83
RNF40-201ENST00000324685 SOX12O15370 315 aa26.49■■□□□ 1.83
RNF40-201ENST00000324685 ITPRIPQ8IWB1 547 aa26.49■■□□□ 1.83
RNF40-201ENST00000324685 CARMIL1Q5VZK9 1371 aa26.48■■□□□ 1.83
RNF40-201ENST00000324685 ERCC6Q03468 1493 aa26.47■■□□□ 1.83
RNF40-201ENST00000324685 NACADO15069 1562 aa26.47■■□□□ 1.83
RNF40-201ENST00000324685 APBB1O00213 710 aa26.46■■□□□ 1.83
RNF40-201ENST00000324685 TPM4P67936 248 aa26.46■■□□□ 1.83
RNF40-201ENST00000324685 CHMP4AQ9BY43 222 aa26.46■■□□□ 1.83
RNF40-201ENST00000324685 PKD2Q13563 968 aa26.44■■□□□ 1.82
RNF40-201ENST00000324685 ISY1Q9ULR0 285 aaKnown RBP26.44■■□□□ 1.82
RNF40-201ENST00000324685 ROCK2O75116 1388 aaKnown RBP26.44■■□□□ 1.82
RNF40-201ENST00000324685 SAFB2Q14151 953 aaKnown RBP eCLIP26.43■■□□□ 1.82
RNF40-201ENST00000324685 U2AF1L5P0DN76 240 aaPredicted RBP26.42■■□□□ 1.82
RNF40-201ENST00000324685 U2AF1Q01081 240 aaKnown RBP eCLIP26.42■■□□□ 1.82
RNF40-201ENST00000324685 EIF3AQ14152 1382 aaKnown RBP26.4■■□□□ 1.82
RNF40-201ENST00000324685 GOLGA6L3A6NEY3 463 aa26.4■■□□□ 1.82
RNF40-201ENST00000324685 SLKQ9H2G2 1235 aaPredicted RBP26.4■■□□□ 1.82
RNF40-201ENST00000324685 CSPP1Q1MSJ5 1256 aa26.39■■□□□ 1.82
RNF40-201ENST00000324685 CUX2O14529 1486 aa26.39■■□□□ 1.82
RNF40-201ENST00000324685 GZF1Q9H116 711 aaPredicted RBP26.39■■□□□ 1.81
RNF40-201ENST00000324685 VPS8Q8N3P4 1428 aa26.39■■□□□ 1.81
RNF40-201ENST00000324685 GPATCH3Q96I76 525 aa26.38■■□□□ 1.81
RNF40-201ENST00000324685 BAZ1AQ9NRL2 1556 aaPredicted RBP26.38■■□□□ 1.81
RNF40-201ENST00000324685 CCDC34Q96HJ3 373 aa26.37■■□□□ 1.81
RNF40-201ENST00000324685 HDAC5Q9UQL6 1122 aa26.36■■□□□ 1.81
RNF40-201ENST00000324685 NOC3LQ8WTT2 800 aaKnown RBP26.35■■□□□ 1.81
RNF40-201ENST00000324685 STK26Q9P289 416 aa26.35■■□□□ 1.81
RNF40-201ENST00000324685 HMMRO75330 724 aa26.34■■□□□ 1.81
RNF40-201ENST00000324685 STK31Q9BXU1 1019 aa26.34■■□□□ 1.81
RNF40-201ENST00000324685 MFAP1P55081 439 aaKnown RBP26.34■■□□□ 1.81
RNF40-201ENST00000324685 SPAG9O60271 1321 aaKnown RBP26.33■■□□□ 1.81
RNF40-201ENST00000324685 IPO9Q96P70 1041 aaKnown RBP26.33■■□□□ 1.81
RNF40-201ENST00000324685 MLECQ14165 292 aa26.31■■□□□ 1.8
RNF40-201ENST00000324685 SMC4Q9NTJ3 1288 aa26.3■■□□□ 1.8
RNF40-201ENST00000324685 MPHOSPH9Q99550 1183 aa26.29■■□□□ 1.8
RNF40-201ENST00000324685 HSP90B1P14625 803 aaKnown RBP26.28■■□□□ 1.8
RNF40-201ENST00000324685 PDE3BQ13370 1112 aa26.28■■□□□ 1.8
RNF40-201ENST00000324685 GGT6Q6P531 493 aa26.28■■□□□ 1.8
RNF40-201ENST00000324685 SOGA1O94964 1423 aa26.27■■□□□ 1.8
RNF40-201ENST00000324685 ANKRD30AQ9BXX3 1397 aa26.26■■□□□ 1.79
RNF40-201ENST00000324685 GORABQ5T7V8 394 aa26.26■■□□□ 1.79
RNF40-201ENST00000324685 RAB3GAP2Q9H2M9 1393 aa26.26■■□□□ 1.79
RNF40-201ENST00000324685 TRIM6-TRIM34B2RNG4 842 aa26.25■■□□□ 1.79
RNF40-201ENST00000324685 PHF14O94880 888 aa26.25■■□□□ 1.79
RNF40-201ENST00000324685 GOLGA6L1Q8N7Z2 621 aa26.25■■□□□ 1.79
RNF40-201ENST00000324685 FOXD1Q16676 465 aa26.25■■□□□ 1.79
RNF40-201ENST00000324685 AMER1Q5JTC6 1135 aaPredicted RBP26.24■■□□□ 1.79
RNF40-201ENST00000324685 CARMIL2Q6F5E8 1435 aa26.24■■□□□ 1.79
RNF40-201ENST00000324685 NUP155O75694 1391 aa26.24■■□□□ 1.79
RNF40-201ENST00000324685 CSB-PGBD3P0DP91 1061 aa26.24■■□□□ 1.79
RNF40-201ENST00000324685 PAK3O75914 559 aaPredicted RBP26.23■■□□□ 1.79
RNF40-201ENST00000324685 CENPJQ9HC77 1338 aaPredicted RBP26.22■■□□□ 1.79
RNF40-201ENST00000324685 LMOD3Q0VAK6 560 aa26.22■■□□□ 1.79
RNF40-201ENST00000324685 USP35Q9P2H5 1018 aa26.22■■□□□ 1.79
RNF40-201ENST00000324685 PHLDB1Q86UU1 1377 aa26.21■■□□□ 1.79
RNF40-201ENST00000324685 TERF2IPQ9NYB0 399 aa26.21■■□□□ 1.79
RNF40-201ENST00000324685 NCBP3Q53F19 620 aaKnown RBP26.21■■□□□ 1.79
RNF40-201ENST00000324685 TNNT3P45378 269 aaPredicted RBP26.2■■□□□ 1.78
RNF40-201ENST00000324685 FMN1Q68DA7 1419 aa26.19■■□□□ 1.78
RNF40-201ENST00000324685 ST18O60284 1047 aa26.19■■□□□ 1.78
RNF40-201ENST00000324685 TSHZ2Q9NRE2 1034 aa26.18■■□□□ 1.78
RNF40-201ENST00000324685 ZNF330Q9Y3S2 320 aaPredicted RBP26.18■■□□□ 1.78
RNF40-201ENST00000324685 NLRP13Q86W25 1043 aa26.18■■□□□ 1.78
RNF40-201ENST00000324685 TAF7LQ5H9L4 462 aa26.17■■□□□ 1.78
RNF40-201ENST00000324685 ARID3AQ99856 593 aa26.17■■□□□ 1.78
RNF40-201ENST00000324685 DDX11L8A8MPP1 907 aa26.16■■□□□ 1.78
RNF40-201ENST00000324685 TMX4Q9H1E5 349 aaPredicted RBP26.16■■□□□ 1.78
RNF40-201ENST00000324685 KIF3AQ9Y496 699 aa26.16■■□□□ 1.78
RNF40-201ENST00000324685 KANK4Q5T7N3 995 aaPredicted RBP26.15■■□□□ 1.78
RNF40-201ENST00000324685 CHMP3Q9Y3E7 222 aa26.15■■□□□ 1.78
RNF40-201ENST00000324685 KIF16BQ96L93 1317 aa26.14■■□□□ 1.77
RNF40-201ENST00000324685 A0A0U1RQG5 324 aaPredicted RBP26.12■■□□□ 1.77
RNF40-201ENST00000324685 EFCAB2Q5VUJ9 269 aa26.12■■□□□ 1.77
RNF40-201ENST00000324685 RASSF8Q8NHQ8 419 aa26.12■■□□□ 1.77
RNF40-201ENST00000324685 TPM3P06753 285 aa26.1■■□□□ 1.77
RNF40-201ENST00000324685 SLC4A10Q6U841 1118 aa26.1■■□□□ 1.77
RNF40-201ENST00000324685 CCDC146Q8IYE0 955 aa26.09■■□□□ 1.77
RNF40-201ENST00000324685 KIF15Q9NS87 1388 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms