RNA–Protein interactions for RNA: ENST00000323977.7

MRE11-202, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 2,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-202ENST00000323977 TOP2AP11388 1531 aaKnown RBP6.74□□□□□ -1.33
MRE11-202ENST00000323977 TDRD9Q8NDG6 1382 aaKnown RBP6.73□□□□□ -1.33
MRE11-202ENST00000323977 CDK11AQ9UQ88 783 aaPredicted RBP6.73□□□□□ -1.33
MRE11-202ENST00000323977 BRD2P25440 801 aaKnown RBP6.72□□□□□ -1.33
MRE11-202ENST00000323977 ASXL2Q76L83 1435 aa6.72□□□□□ -1.33
MRE11-202ENST00000323977 VSIG10Q8N0Z9 540 aa6.72□□□□□ -1.33
MRE11-202ENST00000323977 RAD54L2Q9Y4B4 1467 aa6.71□□□□□ -1.34
MRE11-202ENST00000323977 CDK11BP21127 795 aaKnown RBP6.71□□□□□ -1.34
MRE11-202ENST00000323977 SCAF1Q9H7N4 1312 aaKnown RBP6.71□□□□□ -1.34
MRE11-202ENST00000323977 LRP5O75197 1615 aa6.7□□□□□ -1.34
MRE11-202ENST00000323977 WIZO95785 1651 aa6.7□□□□□ -1.34
MRE11-202ENST00000323977 CUL7Q14999 1698 aa6.7□□□□□ -1.34
MRE11-202ENST00000323977 FHAD1B1AJZ9 1412 aa6.69□□□□□ -1.34
MRE11-202ENST00000323977 POGZQ7Z3K3 1410 aa6.69□□□□□ -1.34
MRE11-202ENST00000323977 RUSC2Q8N2Y8 1516 aa6.69□□□□□ -1.34
MRE11-202ENST00000323977 ABCA10Q8WWZ4 1543 aa6.69□□□□□ -1.34
MRE11-202ENST00000323977 SLC34A2O95436 690 aa6.68□□□□□ -1.34
MRE11-202ENST00000323977 ATXN8OSP0DMR3 200 aa6.68□□□□□ -1.34
MRE11-202ENST00000323977 FER1L4A9Z1Z3 1794 aa6.68□□□□□ -1.34
MRE11-202ENST00000323977 SAMD1Q6SPF0 538 aaPredicted RBP6.68□□□□□ -1.34
MRE11-202ENST00000323977 SUPT5HO00267 1087 aaKnown RBP6.66□□□□□ -1.34
MRE11-202ENST00000323977 FGD5Q6ZNL6 1462 aa6.66□□□□□ -1.34
MRE11-202ENST00000323977 CUX1P39880 1505 aa6.66□□□□□ -1.34
MRE11-202ENST00000323977 ARHGEF40Q8TER5 1519 aa6.66□□□□□ -1.34
MRE11-202ENST00000323977 CPS1P31327 1500 aa6.66□□□□□ -1.34
MRE11-202ENST00000323977 KDM5BQ9UGL1 1544 aa6.65□□□□□ -1.34
MRE11-202ENST00000323977 DHX37Q8IY37 1157 aaKnown RBP6.65□□□□□ -1.34
MRE11-202ENST00000323977 UBAP1LF5GYI3 381 aa6.64□□□□□ -1.35
MRE11-202ENST00000323977 ERICH3Q5RHP9 1530 aa6.64□□□□□ -1.35
MRE11-202ENST00000323977 FANCAO15360 1455 aa6.64□□□□□ -1.35
MRE11-202ENST00000323977 KIAA0556O60303 1618 aa6.64□□□□□ -1.35
MRE11-202ENST00000323977 CDK12Q9NYV4 1490 aaPredicted RBP6.64□□□□□ -1.35
MRE11-202ENST00000323977 HSPA2P54652 639 aa6.63□□□□□ -1.35
MRE11-202ENST00000323977 JPH4Q96JJ6 628 aa6.63□□□□□ -1.35
MRE11-202ENST00000323977 PTPRKQ15262 1439 aa6.63□□□□□ -1.35
MRE11-202ENST00000323977 UBTFP17480 764 aaKnown RBP6.63□□□□□ -1.35
MRE11-202ENST00000323977 FGD1P98174 961 aa6.63□□□□□ -1.35
MRE11-202ENST00000323977 NCOA1Q15788 1441 aa6.62□□□□□ -1.35
MRE11-202ENST00000323977 HSPA1LP34931 641 aa6.62□□□□□ -1.35
MRE11-202ENST00000323977 UPF1Q92900 1129 aaKnown RBP eCLIP6.62□□□□□ -1.35
MRE11-202ENST00000323977 BCL11BQ9C0K0 894 aaPredicted RBP6.62□□□□□ -1.35
MRE11-202ENST00000323977 UHRF1BP1Q6BDS2 1440 aa6.61□□□□□ -1.35
MRE11-202ENST00000323977 HMGB1P09429 215 aaKnown RBP6.61□□□□□ -1.35
MRE11-202ENST00000323977 HSP90B1P14625 803 aaKnown RBP6.61□□□□□ -1.35
MRE11-202ENST00000323977 ANP32EQ9BTT0 268 aa6.61□□□□□ -1.35
MRE11-202ENST00000323977 ANO8Q9HCE9 1232 aaPredicted RBP6.61□□□□□ -1.35
MRE11-202ENST00000323977 SETD1AO15047 1707 aaKnown RBP6.61□□□□□ -1.35
MRE11-202ENST00000323977 RGS17Q9UGC6 210 aaPredicted RBP6.6□□□□□ -1.35
MRE11-202ENST00000323977 ARHGEF12Q9NZN5 1544 aa6.6□□□□□ -1.35
MRE11-202ENST00000323977 TOM1O60784 492 aa6.6□□□□□ -1.35
MRE11-202ENST00000323977 ZCCHC11Q5TAX3 1644 aaKnown RBP6.59□□□□□ -1.35
MRE11-202ENST00000323977 NEO1Q92859 1461 aa6.59□□□□□ -1.35
MRE11-202ENST00000323977 WDR7Q9Y4E6 1490 aa6.57□□□□□ -1.36
MRE11-202ENST00000323977 ZMYM4Q5VZL5 1548 aa6.57□□□□□ -1.36
MRE11-202ENST00000323977 PLA2R1Q13018 1463 aa6.57□□□□□ -1.36
MRE11-202ENST00000323977 CD109Q6YHK3 1445 aa6.57□□□□□ -1.36
MRE11-202ENST00000323977 FRMPD1Q5SYB0 1578 aa6.56□□□□□ -1.36
MRE11-202ENST00000323977 MAGI2Q86UL8 1455 aa6.56□□□□□ -1.36
MRE11-202ENST00000323977 ZNF326Q5BKZ1 582 aaKnown RBP6.56□□□□□ -1.36
MRE11-202ENST00000323977 EFCAB5A4FU69 1503 aa6.55□□□□□ -1.36
MRE11-202ENST00000323977 PTPRGP23470 1445 aa6.55□□□□□ -1.36
MRE11-202ENST00000323977 MYCNP04198 464 aaPredicted RBP6.55□□□□□ -1.36
MRE11-202ENST00000323977 TNIKQ9UKE5 1360 aa6.54□□□□□ -1.36
MRE11-202ENST00000323977 RAPGEF6Q8TEU7 1601 aa6.54□□□□□ -1.36
MRE11-202ENST00000323977 NHSL1Q5SYE7 1610 aa6.54□□□□□ -1.36
MRE11-202ENST00000323977 ZNF142P52746 1687 aaPredicted RBP6.54□□□□□ -1.36
MRE11-202ENST00000323977 AKNAQ7Z591 1439 aa6.53□□□□□ -1.36
MRE11-202ENST00000323977 UACAQ9BZF9 1416 aa6.53□□□□□ -1.36
MRE11-202ENST00000323977 RNF216Q9NWF9 866 aaPredicted RBP6.53□□□□□ -1.36
MRE11-202ENST00000323977 BCCIPQ9P287 314 aaKnown RBP eCLIP6.53□□□□□ -1.36
MRE11-202ENST00000323977 CFAP74Q9C0B2 1584 aa6.52□□□□□ -1.37
MRE11-202ENST00000323977 KDM2AQ9Y2K7 1162 aa6.52□□□□□ -1.37
MRE11-202ENST00000323977 ALKQ9UM73 1620 aa6.52□□□□□ -1.37
MRE11-202ENST00000323977 RSPH4AQ5TD94 716 aa6.52□□□□□ -1.37
MRE11-202ENST00000323977 RNF17Q9BXT8 1623 aaKnown RBP6.51□□□□□ -1.37
MRE11-202ENST00000323977 PKD2Q13563 968 aa6.51□□□□□ -1.37
MRE11-202ENST00000323977 RICTORQ6R327 1708 aa6.51□□□□□ -1.37
MRE11-202ENST00000323977 IGSF3O75054 1194 aa6.51□□□□□ -1.37
MRE11-202ENST00000323977 SLC4A2P04920 1241 aa6.51□□□□□ -1.37
MRE11-202ENST00000323977 SYNMO15061 1565 aa6.51□□□□□ -1.37
MRE11-202ENST00000323977 CARMIL2Q6F5E8 1435 aa6.5□□□□□ -1.37
MRE11-202ENST00000323977 CCDC88BA6NC98 1476 aa6.5□□□□□ -1.37
MRE11-202ENST00000323977 ZEB1P37275 1124 aaPredicted RBP6.5□□□□□ -1.37
MRE11-202ENST00000323977 POTEAQ6S8J7 498 aa6.5□□□□□ -1.37
MRE11-202ENST00000323977 ABCA9Q8IUA7 1624 aa6.5□□□□□ -1.37
MRE11-202ENST00000323977 RBM33Q96EV2 1170 aaKnown RBP6.5□□□□□ -1.37
MRE11-202ENST00000323977 POLR3GLQ9BT43 218 aa6.5□□□□□ -1.37
MRE11-202ENST00000323977 FHOD3Q2V2M9 1422 aa6.49□□□□□ -1.37
MRE11-202ENST00000323977 ZRANB1Q9UGI0 708 aa6.49□□□□□ -1.37
MRE11-202ENST00000323977 CCDC136Q96JN2 1154 aa6.48□□□□□ -1.37
MRE11-202ENST00000323977 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.48□□□□□ -1.37
MRE11-202ENST00000323977 MROH2AA6NES4 1674 aa6.48□□□□□ -1.37
MRE11-202ENST00000323977 ERICH6BQ5W0A0 696 aa6.47□□□□□ -1.37
MRE11-202ENST00000323977 TCOF1Q13428 1488 aaKnown RBP6.47□□□□□ -1.37
MRE11-202ENST00000323977 NPATQ14207 1427 aa6.47□□□□□ -1.37
MRE11-202ENST00000323977 CLSPNQ9HAW4 1339 aa6.47□□□□□ -1.37
MRE11-202ENST00000323977 REREQ9P2R6 1566 aa6.47□□□□□ -1.37
MRE11-202ENST00000323977 C3P01024 1663 aa6.46□□□□□ -1.38
MRE11-202ENST00000323977 ZFYVE16Q7Z3T8 1539 aa6.46□□□□□ -1.38
MRE11-202ENST00000323977 CAMSAP1Q5T5Y3 1602 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms