RNA–Protein interactions for RNA: ENST00000323829.9

SH3TC2-201, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 1 (best)

Gene SH3TC2, Length 7,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-201ENST00000323829 CCDC9Q9Y3X0 531 aaKnown RBP11.25□□□□□ -0.61
SH3TC2-201ENST00000323829 HDGFP51858 240 aaKnown RBP11.24□□□□□ -0.61
SH3TC2-201ENST00000323829 RRP7BPQ9NSQ0 103 aa11.23□□□□□ -0.61
SH3TC2-201ENST00000323829 NEUROD2Q15784 382 aa11.23□□□□□ -0.61
SH3TC2-201ENST00000323829 BAZ1BQ9UIG0 1483 aaKnown RBP11.22□□□□□ -0.61
SH3TC2-201ENST00000323829 CFDP1Q9UEE9 299 aaPredicted RBP11.22□□□□□ -0.61
SH3TC2-201ENST00000323829 PPP4R2Q9NY27 417 aa11.22□□□□□ -0.61
SH3TC2-201ENST00000323829 MARCH6O60337 910 aa11.22□□□□□ -0.61
SH3TC2-201ENST00000323829 CEP162Q5TB80 1403 aa11.21□□□□□ -0.61
SH3TC2-201ENST00000323829 MRS2Q9HD23 443 aa11.19□□□□□ -0.62
SH3TC2-201ENST00000323829 RGS3P49796 1198 aa11.19□□□□□ -0.62
SH3TC2-201ENST00000323829 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.19□□□□□ -0.62
SH3TC2-201ENST00000323829 SOX12O15370 315 aa11.19□□□□□ -0.62
SH3TC2-201ENST00000323829 MEX3CQ5U5Q3 659 aaKnown RBP11.19□□□□□ -0.62
SH3TC2-201ENST00000323829 CCAR2Q8N163 923 aaKnown RBP11.19□□□□□ -0.62
SH3TC2-201ENST00000323829 TPM4P67936 248 aa11.17□□□□□ -0.62
SH3TC2-201ENST00000323829 PLCD4Q9BRC7 762 aa11.17□□□□□ -0.62
SH3TC2-201ENST00000323829 TCEAL9Q9UHQ7 104 aa11.17□□□□□ -0.62
SH3TC2-201ENST00000323829 RSF1Q96T23 1441 aaPredicted RBP11.17□□□□□ -0.62
SH3TC2-201ENST00000323829 CWC22Q9HCG8 908 aaKnown RBP11.17□□□□□ -0.62
SH3TC2-201ENST00000323829 PAF1Q8N7H5 531 aa11.16□□□□□ -0.62
SH3TC2-201ENST00000323829 RAD21O60216 631 aa11.16□□□□□ -0.62
SH3TC2-201ENST00000323829 FRAT1Q92837 279 aaPredicted RBP11.16□□□□□ -0.62
SH3TC2-201ENST00000323829 TPM3P06753 285 aa11.16□□□□□ -0.62
SH3TC2-201ENST00000323829 EIF4G2P78344 907 aaKnown RBP eCLIP11.16□□□□□ -0.62
SH3TC2-201ENST00000323829 APBB1O00213 710 aa11.16□□□□□ -0.62
SH3TC2-201ENST00000323829 PPM1FP49593 454 aaPredicted RBP11.15□□□□□ -0.62
SH3TC2-201ENST00000323829 WDR70Q9NW82 654 aa11.15□□□□□ -0.62
SH3TC2-201ENST00000323829 EEA1Q15075 1411 aa11.15□□□□□ -0.62
SH3TC2-201ENST00000323829 CLIP1P30622 1438 aa11.15□□□□□ -0.62
SH3TC2-201ENST00000323829 CFAP53Q96M91 514 aa11.14□□□□□ -0.63
SH3TC2-201ENST00000323829 EIF4G1Q04637 1599 aaKnown RBP11.14□□□□□ -0.63
SH3TC2-201ENST00000323829 TNIKQ9UKE5 1360 aa11.14□□□□□ -0.63
SH3TC2-201ENST00000323829 KANK1Q14678 1352 aa11.13□□□□□ -0.63
SH3TC2-201ENST00000323829 MCCP23508 829 aa11.13□□□□□ -0.63
SH3TC2-201ENST00000323829 USP35Q9P2H5 1018 aa11.13□□□□□ -0.63
SH3TC2-201ENST00000323829 HSCBQ8IWL3 235 aa11.13□□□□□ -0.63
SH3TC2-201ENST00000323829 GGT6Q6P531 493 aa11.13□□□□□ -0.63
SH3TC2-201ENST00000323829 GZF1Q9H116 711 aaPredicted RBP11.12□□□□□ -0.63
SH3TC2-201ENST00000323829 CCER2I3L3R5 266 aa11.12□□□□□ -0.63
SH3TC2-201ENST00000323829 CCDC97Q96F63 343 aaPredicted RBP11.12□□□□□ -0.63
SH3TC2-201ENST00000323829 HIRIP3Q9BW71 556 aaPredicted RBP11.12□□□□□ -0.63
SH3TC2-201ENST00000323829 TPD52L1Q16890 204 aaPredicted RBP11.12□□□□□ -0.63
SH3TC2-201ENST00000323829 PHF23Q9BUL5 403 aaPredicted RBP11.12□□□□□ -0.63
SH3TC2-201ENST00000323829 CHMP3Q9Y3E7 222 aa11.12□□□□□ -0.63
SH3TC2-201ENST00000323829 CSB-PGBD3P0DP91 1061 aa11.11□□□□□ -0.63
SH3TC2-201ENST00000323829 PAK3O75914 559 aaPredicted RBP11.11□□□□□ -0.63
SH3TC2-201ENST00000323829 CTDP1Q9Y5B0 961 aaPredicted RBP11.1□□□□□ -0.63
SH3TC2-201ENST00000323829 HTATSF1O43719 755 aaKnown RBP11.1□□□□□ -0.63
SH3TC2-201ENST00000323829 MAP7D2Q96T17 732 aa11.1□□□□□ -0.63
SH3TC2-201ENST00000323829 DHX37Q8IY37 1157 aaKnown RBP11.1□□□□□ -0.63
SH3TC2-201ENST00000323829 MAPK8IP3Q9UPT6 1336 aa11.09□□□□□ -0.63
SH3TC2-201ENST00000323829 GOLGA3Q08378 1498 aa11.09□□□□□ -0.63
SH3TC2-201ENST00000323829 KLHL34Q8N239 644 aa11.09□□□□□ -0.63
SH3TC2-201ENST00000323829 NACADO15069 1562 aa11.09□□□□□ -0.63
SH3TC2-201ENST00000323829 CDCA8Q53HL2 280 aa11.09□□□□□ -0.63
SH3TC2-201ENST00000323829 BCCIPQ9P287 314 aaKnown RBP eCLIP11.09□□□□□ -0.63
SH3TC2-201ENST00000323829 SAMD1Q6SPF0 538 aaPredicted RBP11.08□□□□□ -0.64
SH3TC2-201ENST00000323829 GORABQ5T7V8 394 aa11.08□□□□□ -0.64
SH3TC2-201ENST00000323829 TOMM22Q9NS69 142 aa11.08□□□□□ -0.64
SH3TC2-201ENST00000323829 KIAA1211Q6ZU35 1233 aa11.08□□□□□ -0.64
SH3TC2-201ENST00000323829 B4GALNT3Q6L9W6 998 aa11.07□□□□□ -0.64
SH3TC2-201ENST00000323829 FRAT2O75474 233 aaPredicted RBP11.07□□□□□ -0.64
SH3TC2-201ENST00000323829 PCMTD1Q96MG8 357 aaPredicted RBP11.07□□□□□ -0.64
SH3TC2-201ENST00000323829 STK11IPQ8N1F8 1099 aa11.06□□□□□ -0.64
SH3TC2-201ENST00000323829 SKIDA1Q1XH10 827 aa11.06□□□□□ -0.64
SH3TC2-201ENST00000323829 TSR1Q2NL82 804 aaKnown RBP11.06□□□□□ -0.64
SH3TC2-201ENST00000323829 MSH5O43196 834 aa11.06□□□□□ -0.64
SH3TC2-201ENST00000323829 SAFB2Q14151 953 aaKnown RBP eCLIP11.05□□□□□ -0.64
SH3TC2-201ENST00000323829 KNSTRNQ9Y448 316 aa11.05□□□□□ -0.64
SH3TC2-201ENST00000323829 ODF2Q5BJF6 829 aa11.05□□□□□ -0.64
SH3TC2-201ENST00000323829 ZFYVE27Q5T4F4 411 aa11.05□□□□□ -0.64
SH3TC2-201ENST00000323829 CYB5RLQ6IPT4 315 aa11.05□□□□□ -0.64
SH3TC2-201ENST00000323829 DCAF8L1A6NGE4 600 aa11.04□□□□□ -0.64
SH3TC2-201ENST00000323829 U2SURPO15042 1029 aaKnown RBP11.04□□□□□ -0.64
SH3TC2-201ENST00000323829 SRPK2P78362 688 aaKnown RBP11.04□□□□□ -0.64
SH3TC2-201ENST00000323829 KIF27Q86VH2 1401 aa11.04□□□□□ -0.64
SH3TC2-201ENST00000323829 ZNF771Q7L3S4 317 aaPredicted RBP11.04□□□□□ -0.64
SH3TC2-201ENST00000323829 EID1Q9Y6B2 187 aa11.04□□□□□ -0.64
SH3TC2-201ENST00000323829 FANCIQ9NVI1 1328 aa11.04□□□□□ -0.64
SH3TC2-201ENST00000323829 STK26Q9P289 416 aa11.04□□□□□ -0.64
SH3TC2-201ENST00000323829 NUDCQ9Y266 331 aa11.04□□□□□ -0.64
SH3TC2-201ENST00000323829 NOL8Q76FK4 1167 aaKnown RBP11.03□□□□□ -0.64
SH3TC2-201ENST00000323829 SEPT11Q9NVA2 429 aaKnown RBP11.03□□□□□ -0.64
SH3TC2-201ENST00000323829 TIMELESSQ9UNS1 1208 aa11.03□□□□□ -0.64
SH3TC2-201ENST00000323829 BCL11BQ9C0K0 894 aaPredicted RBP11.03□□□□□ -0.64
SH3TC2-201ENST00000323829 CCDC70Q6NSX1 233 aa11.02□□□□□ -0.64
SH3TC2-201ENST00000323829 CCNB3Q8WWL7 1395 aa11.02□□□□□ -0.65
SH3TC2-201ENST00000323829 CCDC34Q96HJ3 373 aa11.02□□□□□ -0.65
SH3TC2-201ENST00000323829 TRIM34Q9BYJ4 488 aa11.01□□□□□ -0.65
SH3TC2-201ENST00000323829 PDS5BQ9NTI5 1447 aa11.01□□□□□ -0.65
SH3TC2-201ENST00000323829 TPM2P07951 284 aa11.01□□□□□ -0.65
SH3TC2-201ENST00000323829 CT47A1Q5JQC4 288 aaPredicted RBP11.01□□□□□ -0.65
SH3TC2-201ENST00000323829 FBXW7Q969H0 707 aa11.01□□□□□ -0.65
SH3TC2-201ENST00000323829 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11□□□□□ -0.65
SH3TC2-201ENST00000323829 HMMRO75330 724 aa11□□□□□ -0.65
SH3TC2-201ENST00000323829 FOXD4L5Q5VV16 416 aaPredicted RBP11□□□□□ -0.65
SH3TC2-201ENST00000323829 HOMER1Q86YM7 354 aa11□□□□□ -0.65
SH3TC2-201ENST00000323829 FOXD4L4Q8WXT5 416 aaPredicted RBP11□□□□□ -0.65
SH3TC2-201ENST00000323829 CECR2Q9BXF3 1484 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms