RNA–Protein interactions for RNA: ENST00000322019.13

TM6SF1-202, Transcript of transmembrane 6 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM6SF1, Length 2,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-202ENST00000322019 ZCCHC11Q5TAX3 1644 aaKnown RBP38.89■■■■□ 3.82
TM6SF1-202ENST00000322019 MAPKBP1O60336 1514 aa38.87■■■■□ 3.81
TM6SF1-202ENST00000322019 DNMT1P26358 1616 aaKnown RBP38.87■■■■□ 3.81
TM6SF1-202ENST00000322019 KDM5BQ9UGL1 1544 aa38.83■■■■□ 3.81
TM6SF1-202ENST00000322019 KCNH8Q96L42 1107 aa38.82■■■■□ 3.81
TM6SF1-202ENST00000322019 TTC37Q6PGP7 1564 aa38.78■■■■□ 3.8
TM6SF1-202ENST00000322019 KDM6BO15054 1643 aa38.77■■■■□ 3.8
TM6SF1-202ENST00000322019 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.76■■■■□ 3.79
TM6SF1-202ENST00000322019 GCC2Q8IWJ2 1684 aa38.76■■■■□ 3.79
TM6SF1-202ENST00000322019 AKNAQ7Z591 1439 aa38.73■■■■□ 3.79
TM6SF1-202ENST00000322019 CDC42BPBQ9Y5S2 1711 aa38.7■■■■□ 3.79
TM6SF1-202ENST00000322019 PREX2Q70Z35 1606 aa38.68■■■■□ 3.78
TM6SF1-202ENST00000322019 ROCK1Q13464 1354 aa38.67■■■■□ 3.78
TM6SF1-202ENST00000322019 HNRNPMP52272 730 aaKnown RBP eCLIP38.63■■■■□ 3.77
TM6SF1-202ENST00000322019 SIN3AQ96ST3 1273 aa38.62■■■■□ 3.77
TM6SF1-202ENST00000322019 CROCC2H7BZ55 1655 aa38.62■■■■□ 3.77
TM6SF1-202ENST00000322019 SAMD9LQ8IVG5 1584 aa38.62■■■■□ 3.77
TM6SF1-202ENST00000322019 ARHGAP5Q13017 1502 aa38.6■■■■□ 3.77
TM6SF1-202ENST00000322019 TRIM52Q96A61 297 aa38.57■■■■□ 3.76
TM6SF1-202ENST00000322019 NEUROD1Q13562 356 aa38.56■■■■□ 3.76
TM6SF1-202ENST00000322019 NCOA1Q15788 1441 aa38.56■■■■□ 3.76
TM6SF1-202ENST00000322019 MYO5CQ9NQX4 1742 aa38.55■■■■□ 3.76
TM6SF1-202ENST00000322019 MBD5Q9P267 1494 aa38.53■■■■□ 3.76
TM6SF1-202ENST00000322019 ADGBQ8N7X0 1667 aa38.53■■■■□ 3.76
TM6SF1-202ENST00000322019 WDR7Q9Y4E6 1490 aa38.51■■■■□ 3.76
TM6SF1-202ENST00000322019 C9orf84Q5VXU9 1444 aa38.5■■■■□ 3.75
TM6SF1-202ENST00000322019 ADGRL2O95490 1459 aa38.49■■■■□ 3.75
TM6SF1-202ENST00000322019 SYCP2Q9BX26 1530 aa38.48■■■■□ 3.75
TM6SF1-202ENST00000322019 ANKRD30AQ9BXX3 1397 aa38.45■■■■□ 3.75
TM6SF1-202ENST00000322019 PLCH2O75038 1416 aa38.45■■■■□ 3.75
TM6SF1-202ENST00000322019 ASXL2Q76L83 1435 aa38.45■■■■□ 3.75
TM6SF1-202ENST00000322019 ARHGEF5Q12774 1597 aa38.45■■■■□ 3.75
TM6SF1-202ENST00000322019 DENND4BO75064 1496 aaPredicted RBP38.44■■■■□ 3.74
TM6SF1-202ENST00000322019 SHANK2Q9UPX8 1470 aa38.44■■■■□ 3.74
TM6SF1-202ENST00000322019 TSPY4P0CV99 314 aa38.43■■■■□ 3.74
TM6SF1-202ENST00000322019 TSPY10P0CW01 314 aa38.43■■■■□ 3.74
TM6SF1-202ENST00000322019 CCDC141Q6ZP82 1450 aa38.41■■■■□ 3.74
TM6SF1-202ENST00000322019 MPHOSPH9Q99550 1183 aa38.37■■■■□ 3.73
TM6SF1-202ENST00000322019 ARHGEF12Q9NZN5 1544 aa38.35■■■■□ 3.73
TM6SF1-202ENST00000322019 NPM1P06748 294 aaKnown RBP eCLIP38.35■■■■□ 3.73
TM6SF1-202ENST00000322019 ZNF316A6NFI3 1004 aaPredicted RBP38.34■■■■□ 3.73
TM6SF1-202ENST00000322019 FOXD1Q16676 465 aa38.34■■■■□ 3.73
TM6SF1-202ENST00000322019 EFCAB2Q5VUJ9 269 aa38.33■■■■□ 3.73
TM6SF1-202ENST00000322019 ANKRD50Q9ULJ7 1429 aa38.32■■■■□ 3.72
TM6SF1-202ENST00000322019 KIF15Q9NS87 1388 aa38.29■■■■□ 3.72
TM6SF1-202ENST00000322019 KIAA1107Q9UPP5 1409 aa38.28■■■■□ 3.72
TM6SF1-202ENST00000322019 PLEKHH2Q8IVE3 1493 aa38.27■■■■□ 3.72
TM6SF1-202ENST00000322019 RSPH4AQ5TD94 716 aa38.27■■■■□ 3.72
TM6SF1-202ENST00000322019 ABCA9Q8IUA7 1624 aa38.26■■■■□ 3.71
TM6SF1-202ENST00000322019 CYB5RLQ6IPT4 315 aa38.25■■■■□ 3.71
TM6SF1-202ENST00000322019 ABCC1P33527 1531 aa38.24■■■■□ 3.71
TM6SF1-202ENST00000322019 SLC4A1APQ9BWU0 796 aaKnown RBP38.23■■■■□ 3.71
TM6SF1-202ENST00000322019 PZPP20742 1482 aa38.19■■■■□ 3.7
TM6SF1-202ENST00000322019 TRAPPC8Q9Y2L5 1435 aa38.19■■■■□ 3.7
TM6SF1-202ENST00000322019 RIMBP3CA6NJZ7 1639 aa38.19■■■■□ 3.7
TM6SF1-202ENST00000322019 RIMBP3BA6NNM3 1639 aa38.19■■■■□ 3.7
TM6SF1-202ENST00000322019 RIMBP3Q9UFD9 1639 aa38.19■■■■□ 3.7
TM6SF1-202ENST00000322019 ARAP3Q8WWN8 1544 aa38.17■■■■□ 3.7
TM6SF1-202ENST00000322019 FANCAO15360 1455 aa38.17■■■■□ 3.7
TM6SF1-202ENST00000322019 MAST1Q9Y2H9 1570 aa38.15■■■■□ 3.7
TM6SF1-202ENST00000322019 TONSLQ96HA7 1378 aa38.15■■■■□ 3.7
TM6SF1-202ENST00000322019 ACIN1Q9UKV3 1341 aaKnown RBP38.11■■■■□ 3.69
TM6SF1-202ENST00000322019 AFAP1Q8N556 730 aa38.11■■■■□ 3.69
TM6SF1-202ENST00000322019 TIMELESSQ9UNS1 1208 aa38.11■■■■□ 3.69
TM6SF1-202ENST00000322019 DIEXFQ68CQ4 756 aaKnown RBP38.1■■■■□ 3.69
TM6SF1-202ENST00000322019 NUP155O75694 1391 aa38.07■■■■□ 3.69
TM6SF1-202ENST00000322019 PPP1R15AO75807 674 aaPredicted RBP38.06■■■■□ 3.68
TM6SF1-202ENST00000322019 ANKRD30BQ9BXX2 1392 aa38.05■■■■□ 3.68
TM6SF1-202ENST00000322019 PLXNC1O60486 1568 aa38.03■■■■□ 3.68
TM6SF1-202ENST00000322019 PKD2Q13563 968 aa38.01■■■■□ 3.68
TM6SF1-202ENST00000322019 ADGRL1O94910 1474 aa38.01■■■■□ 3.68
TM6SF1-202ENST00000322019 CD109Q6YHK3 1445 aa37.99■■■■□ 3.67
TM6SF1-202ENST00000322019 SPAG9O60271 1321 aaKnown RBP37.98■■■■□ 3.67
TM6SF1-202ENST00000322019 SCAPERQ9BY12 1400 aa37.98■■■■□ 3.67
TM6SF1-202ENST00000322019 ZFYVE16Q7Z3T8 1539 aa37.93■■■■□ 3.66
TM6SF1-202ENST00000322019 KDM5DQ9BY66 1539 aa37.93■■■■□ 3.66
TM6SF1-202ENST00000322019 DUOX2Q9NRD8 1548 aa37.91■■■■□ 3.66
TM6SF1-202ENST00000322019 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.91■■■■□ 3.66
TM6SF1-202ENST00000322019 RPRD2Q5VT52 1461 aaKnown RBP37.88■■■■□ 3.65
TM6SF1-202ENST00000322019 FAM135AQ9P2D6 1515 aa37.85■■■■□ 3.65
TM6SF1-202ENST00000322019 L3MBTL2Q969R5 705 aa37.84■■■■□ 3.65
TM6SF1-202ENST00000322019 MYT1LQ9UL68 1186 aa37.84■■■■□ 3.65
TM6SF1-202ENST00000322019 RTEL1-TNFRSF6BF6WH68 1400 aa37.84■■■■□ 3.65
TM6SF1-202ENST00000322019 ERBINQ96RT1 1412 aa37.82■■■■□ 3.65
TM6SF1-202ENST00000322019 UNC13BO14795 1591 aa37.82■■■■□ 3.65
TM6SF1-202ENST00000322019 ATP7AQ04656 1500 aa37.82■■■■□ 3.64
TM6SF1-202ENST00000322019 INO80Q9ULG1 1556 aaPredicted RBP37.81■■■■□ 3.64
TM6SF1-202ENST00000322019 HIRIP3Q9BW71 556 aaPredicted RBP37.75■■■■□ 3.63
TM6SF1-202ENST00000322019 TEX14Q8IWB6 1497 aa37.75■■■■□ 3.63
TM6SF1-202ENST00000322019 CFAP74Q9C0B2 1584 aa37.73■■■■□ 3.63
TM6SF1-202ENST00000322019 ZNF518AQ6AHZ1 1483 aa37.71■■■■□ 3.63
TM6SF1-202ENST00000322019 POGZQ7Z3K3 1410 aa37.68■■■■□ 3.62
TM6SF1-202ENST00000322019 MAGI2Q86UL8 1455 aa37.68■■■■□ 3.62
TM6SF1-202ENST00000322019 IQGAP3Q86VI3 1631 aa37.68■■■■□ 3.62
TM6SF1-202ENST00000322019 MAP3K4Q9Y6R4 1608 aa37.68■■■■□ 3.62
TM6SF1-202ENST00000322019 KIDINS220Q9ULH0 1771 aa37.66■■■■□ 3.62
TM6SF1-202ENST00000322019 FAM69CQ0P6D2 419 aa37.65■■■■□ 3.62
TM6SF1-202ENST00000322019 RAPGEF3O95398 923 aa37.63■■■■□ 3.61
TM6SF1-202ENST00000322019 NEO1Q92859 1461 aa37.62■■■■□ 3.61
TM6SF1-202ENST00000322019 DIP2BQ9P265 1576 aa37.6■■■■□ 3.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms