RNA–Protein interactions for RNA: ENST00000321545.4

ZNF543-201, Transcript of zinc finger protein 543, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF543, Length 3,659 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF543-201ENST00000321545 ARHGEF11O15085 1522 aa15.99■□□□□ 0.15
ZNF543-201ENST00000321545 TROQ12816 1431 aaPredicted RBP15.98■□□□□ 0.15
ZNF543-201ENST00000321545 NUP153P49790 1475 aaKnown RBP15.98■□□□□ 0.15
ZNF543-201ENST00000321545 HECW1Q76N89 1606 aa15.97■□□□□ 0.15
ZNF543-201ENST00000321545 WDR97A6NE52 1622 aa15.97■□□□□ 0.15
ZNF543-201ENST00000321545 NUP160Q12769 1436 aa15.97■□□□□ 0.15
ZNF543-201ENST00000321545 KIF3BO15066 747 aa15.97■□□□□ 0.15
ZNF543-201ENST00000321545 FAM69CQ0P6D2 419 aa15.96■□□□□ 0.15
ZNF543-201ENST00000321545 SPAG9O60271 1321 aaKnown RBP15.95■□□□□ 0.14
ZNF543-201ENST00000321545 ARID4BQ4LE39 1312 aaPredicted RBP15.95■□□□□ 0.14
ZNF543-201ENST00000321545 ANKRD30AQ9BXX3 1397 aa15.94■□□□□ 0.14
ZNF543-201ENST00000321545 MIER1Q8N108 512 aa15.94■□□□□ 0.14
ZNF543-201ENST00000321545 KIAA0556O60303 1618 aa15.94■□□□□ 0.14
ZNF543-201ENST00000321545 UGGT2Q9NYU1 1516 aa15.93■□□□□ 0.14
ZNF543-201ENST00000321545 ATP10BO94823 1461 aa15.92■□□□□ 0.14
ZNF543-201ENST00000321545 EHBP1L1Q8N3D4 1523 aa15.92■□□□□ 0.14
ZNF543-201ENST00000321545 ESF1Q9H501 851 aaKnown RBP15.92■□□□□ 0.14
ZNF543-201ENST00000321545 BCANQ96GW7 911 aa15.92■□□□□ 0.14
ZNF543-201ENST00000321545 PTPRKQ15262 1439 aa15.91■□□□□ 0.14
ZNF543-201ENST00000321545 DCAF11Q8TEB1 546 aa15.91■□□□□ 0.14
ZNF543-201ENST00000321545 RAPGEF3O95398 923 aa15.9■□□□□ 0.14
ZNF543-201ENST00000321545 STAG3Q9UJ98 1225 aa15.9■□□□□ 0.14
ZNF543-201ENST00000321545 L3MBTL2Q969R5 705 aa15.89■□□□□ 0.13
ZNF543-201ENST00000321545 ARHGAP5Q13017 1502 aa15.88■□□□□ 0.13
ZNF543-201ENST00000321545 ERCC6L2Q5T890 1561 aa15.88■□□□□ 0.13
ZNF543-201ENST00000321545 SENP3-EIF4A1A0A087X0R7 540 aa15.88■□□□□ 0.13
ZNF543-201ENST00000321545 MAGI3Q5TCQ9 1506 aa15.87■□□□□ 0.13
ZNF543-201ENST00000321545 SUPT6HQ7KZ85 1726 aaKnown RBP15.87■□□□□ 0.13
ZNF543-201ENST00000321545 KIF15Q9NS87 1388 aa15.86■□□□□ 0.13
ZNF543-201ENST00000321545 RAPGEF6Q8TEU7 1601 aa15.86■□□□□ 0.13
ZNF543-201ENST00000321545 NUTM2DQ5VT03 806 aaPredicted RBP15.86■□□□□ 0.13
ZNF543-201ENST00000321545 SAMD9Q5K651 1589 aa15.85■□□□□ 0.13
ZNF543-201ENST00000321545 CLSPNQ9HAW4 1339 aa15.83■□□□□ 0.13
ZNF543-201ENST00000321545 CHD1O14646 1710 aa15.82■□□□□ 0.12
ZNF543-201ENST00000321545 PPP1R15AO75807 674 aaPredicted RBP15.82■□□□□ 0.12
ZNF543-201ENST00000321545 NAIPQ13075 1403 aa15.82■□□□□ 0.12
ZNF543-201ENST00000321545 EIF4G2P78344 907 aaKnown RBP eCLIP15.81■□□□□ 0.12
ZNF543-201ENST00000321545 DAPK1P53355 1430 aa15.81■□□□□ 0.12
ZNF543-201ENST00000321545 MAP3K1Q13233 1512 aa15.81■□□□□ 0.12
ZNF543-201ENST00000321545 ANP32CO43423 234 aa15.8■□□□□ 0.12
ZNF543-201ENST00000321545 ANKRD50Q9ULJ7 1429 aa15.8■□□□□ 0.12
ZNF543-201ENST00000321545 ABCC5O15440 1437 aa15.79■□□□□ 0.12
ZNF543-201ENST00000321545 PTPN23Q9H3S7 1636 aa15.79■□□□□ 0.12
ZNF543-201ENST00000321545 GPATCH8Q9UKJ3 1502 aaKnown RBP15.79■□□□□ 0.12
ZNF543-201ENST00000321545 SCAPERQ9BY12 1400 aa15.79■□□□□ 0.12
ZNF543-201ENST00000321545 CARD11Q9BXL7 1154 aa15.79■□□□□ 0.12
ZNF543-201ENST00000321545 MIA2Q96PC5 1412 aa15.78■□□□□ 0.12
ZNF543-201ENST00000321545 CAMSAP2Q08AD1 1489 aa15.77■□□□□ 0.12
ZNF543-201ENST00000321545 C9orf84Q5VXU9 1444 aa15.77■□□□□ 0.12
ZNF543-201ENST00000321545 RSPH4AQ5TD94 716 aa15.77■□□□□ 0.11
ZNF543-201ENST00000321545 HFM1A2PYH4 1435 aa15.76■□□□□ 0.11
ZNF543-201ENST00000321545 HSPA5P11021 654 aaKnown RBP15.75■□□□□ 0.11
ZNF543-201ENST00000321545 WASHC2CQ9Y4E1 1318 aa15.74■□□□□ 0.11
ZNF543-201ENST00000321545 CFAP43Q8NDM7 1665 aa15.72■□□□□ 0.11
ZNF543-201ENST00000321545 KIF14Q15058 1648 aa15.71■□□□□ 0.11
ZNF543-201ENST00000321545 SAFB2Q14151 953 aaKnown RBP eCLIP15.71■□□□□ 0.11
ZNF543-201ENST00000321545 ASXL2Q76L83 1435 aa15.71■□□□□ 0.11
ZNF543-201ENST00000321545 BCL11AQ9H165 835 aa15.71■□□□□ 0.1
ZNF543-201ENST00000321545 KANK1Q14678 1352 aa15.68■□□□□ 0.1
ZNF543-201ENST00000321545 CD109Q6YHK3 1445 aa15.68■□□□□ 0.1
ZNF543-201ENST00000321545 NCOA1Q15788 1441 aa15.67■□□□□ 0.1
ZNF543-201ENST00000321545 FAM9BQ8IZU0 186 aa15.66■□□□□ 0.1
ZNF543-201ENST00000321545 SALL2Q9Y467 1007 aaPredicted RBP15.65■□□□□ 0.1
ZNF543-201ENST00000321545 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.65■□□□□ 0.1
ZNF543-201ENST00000321545 NBPF8Q3BBV2 869 aa15.64■□□□□ 0.09
ZNF543-201ENST00000321545 STK26Q9P289 416 aa15.64■□□□□ 0.09
ZNF543-201ENST00000321545 ABCC2Q92887 1545 aa15.63■□□□□ 0.09
ZNF543-201ENST00000321545 TRAPPC8Q9Y2L5 1435 aa15.62■□□□□ 0.09
ZNF543-201ENST00000321545 ERICH6Q7L0X2 663 aa15.62■□□□□ 0.09
ZNF543-201ENST00000321545 FANCAO15360 1455 aa15.62■□□□□ 0.09
ZNF543-201ENST00000321545 AKNAQ7Z591 1439 aa15.61■□□□□ 0.09
ZNF543-201ENST00000321545 SYCP2Q9BX26 1530 aa15.61■□□□□ 0.09
ZNF543-201ENST00000321545 CCDC144AA2RUR9 1427 aa15.61■□□□□ 0.09
ZNF543-201ENST00000321545 PLEKHG5O94827 1062 aa15.61■□□□□ 0.09
ZNF543-201ENST00000321545 CCDC141Q6ZP82 1450 aa15.61■□□□□ 0.09
ZNF543-201ENST00000321545 TIMELESSQ9UNS1 1208 aa15.61■□□□□ 0.09
ZNF543-201ENST00000321545 PLEKHH2Q8IVE3 1493 aa15.6■□□□□ 0.09
ZNF543-201ENST00000321545 ADGRL1O94910 1474 aa15.6■□□□□ 0.09
ZNF543-201ENST00000321545 TMC1Q8TDI8 760 aa15.59■□□□□ 0.09
ZNF543-201ENST00000321545 ABCA8O94911 1581 aa15.59■□□□□ 0.09
ZNF543-201ENST00000321545 ST20-MTHFSA0A0A6YYL1 179 aa15.58■□□□□ 0.08
ZNF543-201ENST00000321545 WDR7Q9Y4E6 1490 aa15.58■□□□□ 0.08
ZNF543-201ENST00000321545 ROCK2O75116 1388 aaKnown RBP15.57■□□□□ 0.08
ZNF543-201ENST00000321545 PLCH2O75038 1416 aa15.57■□□□□ 0.08
ZNF543-201ENST00000321545 NBPF1Q3BBV0 1214 aa15.56■□□□□ 0.08
ZNF543-201ENST00000321545 LRRIQ1Q96JM4 1722 aa15.56■□□□□ 0.08
ZNF543-201ENST00000321545 MRS2Q9HD23 443 aa15.55■□□□□ 0.08
ZNF543-201ENST00000321545 ROCK1Q13464 1354 aa15.55■□□□□ 0.08
ZNF543-201ENST00000321545 MAPKBP1O60336 1514 aa15.55■□□□□ 0.08
ZNF543-201ENST00000321545 HNRNPUQ00839 825 aaKnown RBP eCLIP15.54■□□□□ 0.08
ZNF543-201ENST00000321545 TRAK1Q9UPV9 953 aa15.53■□□□□ 0.08
ZNF543-201ENST00000321545 CC2D1BQ5T0F9 858 aaKnown RBP15.52■□□□□ 0.07
ZNF543-201ENST00000321545 TNNT2P45379 298 aaPredicted RBP15.51■□□□□ 0.07
ZNF543-201ENST00000321545 KIAA1107Q9UPP5 1409 aa15.51■□□□□ 0.07
ZNF543-201ENST00000321545 TCOF1Q13428 1488 aaKnown RBP15.51■□□□□ 0.07
ZNF543-201ENST00000321545 TMEM132EQ6IEE7 984 aa15.5■□□□□ 0.07
ZNF543-201ENST00000321545 ANKRD30BQ9BXX2 1392 aa15.5■□□□□ 0.07
ZNF543-201ENST00000321545 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.5■□□□□ 0.07
ZNF543-201ENST00000321545 KDM6BO15054 1643 aa15.49■□□□□ 0.07
ZNF543-201ENST00000321545 ABCC10Q5T3U5 1492 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms