RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 ZNF428Q96B54 188 aa11.4□□□□□ -0.58
SSBP2-201ENST00000320672 CEP162Q5TB80 1403 aa11.4□□□□□ -0.58
SSBP2-201ENST00000320672 RRP7AQ9Y3A4 280 aaKnown RBP11.4□□□□□ -0.58
SSBP2-201ENST00000320672 ELL2O00472 640 aaPredicted RBP11.39□□□□□ -0.59
SSBP2-201ENST00000320672 BCL11BQ9C0K0 894 aaPredicted RBP11.39□□□□□ -0.59
SSBP2-201ENST00000320672 PPP4R2Q9NY27 417 aa11.39□□□□□ -0.59
SSBP2-201ENST00000320672 GOLGA2Q08379 1002 aa11.39□□□□□ -0.59
SSBP2-201ENST00000320672 RBM19Q9Y4C8 960 aaKnown RBP11.38□□□□□ -0.59
SSBP2-201ENST00000320672 MORC1Q86VD1 984 aa11.38□□□□□ -0.59
SSBP2-201ENST00000320672 TCERG1O14776 1098 aaKnown RBP11.37□□□□□ -0.59
SSBP2-201ENST00000320672 BCL2L13Q9BXK5 485 aa11.37□□□□□ -0.59
SSBP2-201ENST00000320672 CASC1Q6TDU7 716 aa11.36□□□□□ -0.59
SSBP2-201ENST00000320672 PLIN1O60240 522 aa11.36□□□□□ -0.59
SSBP2-201ENST00000320672 CHMP3Q9Y3E7 222 aa11.36□□□□□ -0.59
SSBP2-201ENST00000320672 CREBRFQ8IUR6 639 aa11.36□□□□□ -0.59
SSBP2-201ENST00000320672 CSB-PGBD3P0DP91 1061 aa11.36□□□□□ -0.59
SSBP2-201ENST00000320672 MFAP1P55081 439 aaKnown RBP11.35□□□□□ -0.59
SSBP2-201ENST00000320672 DRC7Q8IY82 874 aa11.35□□□□□ -0.59
SSBP2-201ENST00000320672 NUDCQ9Y266 331 aa11.35□□□□□ -0.59
SSBP2-201ENST00000320672 SLC4A10Q6U841 1118 aa11.35□□□□□ -0.59
SSBP2-201ENST00000320672 WWC1Q8IX03 1113 aa11.35□□□□□ -0.59
SSBP2-201ENST00000320672 ITPRIPQ8IWB1 547 aa11.34□□□□□ -0.59
SSBP2-201ENST00000320672 U2AF1L5P0DN76 240 aaPredicted RBP11.33□□□□□ -0.59
SSBP2-201ENST00000320672 U2AF1Q01081 240 aaKnown RBP eCLIP11.33□□□□□ -0.59
SSBP2-201ENST00000320672 NGEFQ8N5V2 710 aa11.33□□□□□ -0.6
SSBP2-201ENST00000320672 NECTIN2Q92692 538 aa11.33□□□□□ -0.6
SSBP2-201ENST00000320672 PKD2Q13563 968 aa11.33□□□□□ -0.6
SSBP2-201ENST00000320672 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.33□□□□□ -0.6
SSBP2-201ENST00000320672 FBXO3Q9UK99 471 aa11.33□□□□□ -0.6
SSBP2-201ENST00000320672 GOLGA6L4A6NEF3 574 aa11.31□□□□□ -0.6
SSBP2-201ENST00000320672 HSP90B1P14625 803 aaKnown RBP11.3□□□□□ -0.6
SSBP2-201ENST00000320672 HSCBQ8IWL3 235 aa11.29□□□□□ -0.6
SSBP2-201ENST00000320672 TMF1P82094 1093 aa11.29□□□□□ -0.6
SSBP2-201ENST00000320672 KDM4AO75164 1064 aa11.28□□□□□ -0.6
SSBP2-201ENST00000320672 EIF4G1Q04637 1599 aaKnown RBP11.28□□□□□ -0.6
SSBP2-201ENST00000320672 HNRNPMP52272 730 aaKnown RBP eCLIP11.28□□□□□ -0.61e-6■■■■□ 22.8
SSBP2-201ENST00000320672 RTF1Q92541 710 aaKnown RBP11.27□□□□□ -0.61
SSBP2-201ENST00000320672 SOGA1O94964 1423 aa11.26□□□□□ -0.61
SSBP2-201ENST00000320672 TRIM6-TRIM34B2RNG4 842 aa11.26□□□□□ -0.61
SSBP2-201ENST00000320672 CECR2Q9BXF3 1484 aa11.26□□□□□ -0.61
SSBP2-201ENST00000320672 TRAK1Q9UPV9 953 aa11.25□□□□□ -0.61
SSBP2-201ENST00000320672 GNL2Q13823 731 aaKnown RBP11.25□□□□□ -0.61
SSBP2-201ENST00000320672 TOMM22Q9NS69 142 aa11.24□□□□□ -0.61
SSBP2-201ENST00000320672 TSHZ2Q9NRE2 1034 aa11.24□□□□□ -0.61
SSBP2-201ENST00000320672 FOSBP53539 338 aa11.23□□□□□ -0.61
SSBP2-201ENST00000320672 CDCA8Q53HL2 280 aa11.22□□□□□ -0.61
SSBP2-201ENST00000320672 FBXW7Q969H0 707 aa11.22□□□□□ -0.61
SSBP2-201ENST00000320672 RCAN3Q9UKA8 241 aa11.22□□□□□ -0.61
SSBP2-201ENST00000320672 C11orf95C9JLR9 678 aaPredicted RBP11.21□□□□□ -0.61
SSBP2-201ENST00000320672 RAD21O60216 631 aa11.21□□□□□ -0.62
SSBP2-201ENST00000320672 CCNB3Q8WWL7 1395 aa11.2□□□□□ -0.62
SSBP2-201ENST00000320672 SMC4Q9NTJ3 1288 aa11.2□□□□□ -0.62
SSBP2-201ENST00000320672 SAMD1Q6SPF0 538 aaPredicted RBP11.2□□□□□ -0.62
SSBP2-201ENST00000320672 PRM3Q9NNZ6 103 aa11.2□□□□□ -0.62
SSBP2-201ENST00000320672 MSNP26038 577 aaKnown RBP11.2□□□□□ -0.62
SSBP2-201ENST00000320672 KIF3BO15066 747 aa11.19□□□□□ -0.62
SSBP2-201ENST00000320672 GOLGA3Q08378 1498 aa11.19□□□□□ -0.62
SSBP2-201ENST00000320672 GORABQ5T7V8 394 aa11.19□□□□□ -0.62
SSBP2-201ENST00000320672 MSH5O43196 834 aa11.18□□□□□ -0.62
SSBP2-201ENST00000320672 NUTM2GQ5VZR2 741 aa11.18□□□□□ -0.62
SSBP2-201ENST00000320672 WRNQ14191 1432 aaPredicted RBP eCLIP11.17□□□□□ -0.62
SSBP2-201ENST00000320672 RILPL2Q969X0 211 aa11.17□□□□□ -0.62
SSBP2-201ENST00000320672 MPHOSPH9Q99550 1183 aa11.17□□□□□ -0.62
SSBP2-201ENST00000320672 TAF7LQ5H9L4 462 aa11.17□□□□□ -0.62
SSBP2-201ENST00000320672 EXOC6Q8TAG9 804 aa11.17□□□□□ -0.62
SSBP2-201ENST00000320672 EIF2S2P20042 333 aaKnown RBP11.17□□□□□ -0.62
SSBP2-201ENST00000320672 VPS53Q5VIR6 699 aa11.16□□□□□ -0.62
SSBP2-201ENST00000320672 L3MBTL2Q969R5 705 aa11.16□□□□□ -0.62
SSBP2-201ENST00000320672 TNIKQ9UKE5 1360 aa11.15□□□□□ -0.62
SSBP2-201ENST00000320672 KLHL34Q8N239 644 aa11.15□□□□□ -0.62
SSBP2-201ENST00000320672 HDGFL2Q7Z4V5 671 aaPredicted RBP11.15□□□□□ -0.62
SSBP2-201ENST00000320672 NGDNQ8NEJ9 315 aaKnown RBP11.15□□□□□ -0.62
SSBP2-201ENST00000320672 ROCK2O75116 1388 aaKnown RBP11.15□□□□□ -0.63
SSBP2-201ENST00000320672 KIAA1211Q6ZU35 1233 aa11.14□□□□□ -0.63
SSBP2-201ENST00000320672 ERCC6Q03468 1493 aa11.14□□□□□ -0.63
SSBP2-201ENST00000320672 TDRD9Q8NDG6 1382 aaKnown RBP11.14□□□□□ -0.63
SSBP2-201ENST00000320672 FRAT2O75474 233 aaPredicted RBP11.14□□□□□ -0.63
SSBP2-201ENST00000320672 MTMR7Q9Y216 660 aa11.13□□□□□ -0.63
SSBP2-201ENST00000320672 PES1O00541 588 aaKnown RBP11.13□□□□□ -0.63
SSBP2-201ENST00000320672 SYTL4Q96C24 671 aaPredicted RBP11.12□□□□□ -0.63
SSBP2-201ENST00000320672 TIMELESSQ9UNS1 1208 aa11.12□□□□□ -0.63
SSBP2-201ENST00000320672 COG6Q9Y2V7 657 aa11.12□□□□□ -0.63
SSBP2-201ENST00000320672 CCDC180Q9P1Z9 1646 aa11.12□□□□□ -0.63
SSBP2-201ENST00000320672 CHMP4CQ96CF2 233 aa11.12□□□□□ -0.63
SSBP2-201ENST00000320672 FAM177BA6PVY3 158 aa11.12□□□□□ -0.63
SSBP2-201ENST00000320672 PNNQ9H307 717 aaKnown RBP11.12□□□□□ -0.63
SSBP2-201ENST00000320672 MCCP23508 829 aa11.12□□□□□ -0.63
SSBP2-201ENST00000320672 AMPHP49418 695 aa11.12□□□□□ -0.63
SSBP2-201ENST00000320672 RASSF8Q8NHQ8 419 aa11.12□□□□□ -0.63
SSBP2-201ENST00000320672 NUP155O75694 1391 aa11.11□□□□□ -0.63
SSBP2-201ENST00000320672 CRBNQ96SW2 442 aa11.11□□□□□ -0.63
SSBP2-201ENST00000320672 G3V3G9 751 aa11.11□□□□□ -0.63
SSBP2-201ENST00000320672 DCAF8Q5TAQ9 597 aa11.11□□□□□ -0.63
SSBP2-201ENST00000320672 MINK1Q8N4C8 1332 aaPredicted RBP11.1□□□□□ -0.63
SSBP2-201ENST00000320672 PANK3Q9H999 370 aa11.1□□□□□ -0.63
SSBP2-201ENST00000320672 ANKRD45Q5TZF3 282 aa11.1□□□□□ -0.63
SSBP2-201ENST00000320672 PATL2C9JE40 543 aaKnown RBP11.1□□□□□ -0.63
SSBP2-201ENST00000320672 STK11IPQ8N1F8 1099 aa11.1□□□□□ -0.63
SSBP2-201ENST00000320672 KTN1Q86UP2 1357 aaKnown RBP11.09□□□□□ -0.63
SSBP2-201ENST00000320672 GOLGA6L6A8MZA4 724 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 160.4 ms