RNA–Protein interactions for RNA: ENST00000320161.10

SGIP1-202, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 680 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-202ENST00000320161 HECW1Q76N89 1606 aa13.85□□□□□ -0.19
SGIP1-202ENST00000320161 ZFYVE16Q7Z3T8 1539 aa13.85□□□□□ -0.19
SGIP1-202ENST00000320161 PCF11O94913 1555 aaKnown RBP13.84□□□□□ -0.19
SGIP1-202ENST00000320161 ZMYM4Q5VZL5 1548 aa13.84□□□□□ -0.19
SGIP1-202ENST00000320161 FER1L4A9Z1Z3 1794 aa13.83□□□□□ -0.19
SGIP1-202ENST00000320161 FMN1Q68DA7 1419 aa13.83□□□□□ -0.2
SGIP1-202ENST00000320161 MAGI2Q86UL8 1455 aa13.82□□□□□ -0.2
SGIP1-202ENST00000320161 CDK13Q14004 1512 aaKnown RBP13.82□□□□□ -0.2
SGIP1-202ENST00000320161 FBXO41Q8TF61 875 aa13.82□□□□□ -0.2
SGIP1-202ENST00000320161 EHMT2Q96KQ7 1210 aa13.8□□□□□ -0.2
SGIP1-202ENST00000320161 KIF14Q15058 1648 aa13.79□□□□□ -0.2
SGIP1-202ENST00000320161 SCAPERQ9BY12 1400 aa13.79□□□□□ -0.2
SGIP1-202ENST00000320161 MLECQ14165 292 aa13.78□□□□□ -0.2
SGIP1-202ENST00000320161 EFCAB2Q5VUJ9 269 aa13.78□□□□□ -0.2
SGIP1-202ENST00000320161 MYT1LQ9UL68 1186 aa13.78□□□□□ -0.2
SGIP1-202ENST00000320161 PLCH2O75038 1416 aa13.78□□□□□ -0.2
SGIP1-202ENST00000320161 CLIP1P30622 1438 aa13.78□□□□□ -0.2
SGIP1-202ENST00000320161 LMTK3Q96Q04 1460 aa13.78□□□□□ -0.2
SGIP1-202ENST00000320161 ARHGAP5Q13017 1502 aa13.75□□□□□ -0.21
SGIP1-202ENST00000320161 YEATS2Q9ULM3 1422 aa13.75□□□□□ -0.21
SGIP1-202ENST00000320161 ATP10AO60312 1499 aa13.74□□□□□ -0.21
SGIP1-202ENST00000320161 ZNF518AQ6AHZ1 1483 aa13.74□□□□□ -0.21
SGIP1-202ENST00000320161 C9orf84Q5VXU9 1444 aa13.73□□□□□ -0.21
SGIP1-202ENST00000320161 PREX1Q8TCU6 1659 aa13.73□□□□□ -0.21
SGIP1-202ENST00000320161 SIGLEC1Q9BZZ2 1709 aa13.73□□□□□ -0.21
SGIP1-202ENST00000320161 CACNB1Q02641 598 aaPredicted RBP13.72□□□□□ -0.21
SGIP1-202ENST00000320161 ARHGAP35Q9NRY4 1499 aa13.72□□□□□ -0.21
SGIP1-202ENST00000320161 SETD1BQ9UPS6 1966 aaKnown RBP13.71□□□□□ -0.21
SGIP1-202ENST00000320161 HSPA2P54652 639 aa13.71□□□□□ -0.21
SGIP1-202ENST00000320161 TROQ12816 1431 aaPredicted RBP13.71□□□□□ -0.22
SGIP1-202ENST00000320161 ESF1Q9H501 851 aaKnown RBP13.7□□□□□ -0.22
SGIP1-202ENST00000320161 LRRIQ1Q96JM4 1722 aa13.69□□□□□ -0.22
SGIP1-202ENST00000320161 CDC42BPBQ9Y5S2 1711 aa13.69□□□□□ -0.22
SGIP1-202ENST00000320161 CCDC18Q5T9S5 1454 aa13.68□□□□□ -0.22
SGIP1-202ENST00000320161 ARHGEF12Q9NZN5 1544 aa13.68□□□□□ -0.22
SGIP1-202ENST00000320161 KDM5CP41229 1560 aa13.66□□□□□ -0.22
SGIP1-202ENST00000320161 PREX2Q70Z35 1606 aa13.66□□□□□ -0.22
SGIP1-202ENST00000320161 DMRT2Q9Y5R5 561 aa13.65□□□□□ -0.22
SGIP1-202ENST00000320161 ITSN2Q9NZM3 1697 aa13.64□□□□□ -0.23
SGIP1-202ENST00000320161 AFAP1Q8N556 730 aa13.64□□□□□ -0.23
SGIP1-202ENST00000320161 UHRF1BP1Q6BDS2 1440 aa13.64□□□□□ -0.23
SGIP1-202ENST00000320161 DIP2CQ9Y2E4 1556 aa13.63□□□□□ -0.23
SGIP1-202ENST00000320161 REREQ9P2R6 1566 aa13.62□□□□□ -0.23
SGIP1-202ENST00000320161 CDC42BPAQ5VT25 1732 aa13.62□□□□□ -0.23
SGIP1-202ENST00000320161 CERKQ8TCT0 537 aa13.62□□□□□ -0.23
SGIP1-202ENST00000320161 CASKIN1Q8WXD9 1431 aa13.62□□□□□ -0.23
SGIP1-202ENST00000320161 ABCA6Q8N139 1617 aa13.61□□□□□ -0.23
SGIP1-202ENST00000320161 C3P01024 1663 aa13.61□□□□□ -0.23
SGIP1-202ENST00000320161 CEBPAP49715 358 aaPredicted RBP13.61□□□□□ -0.23
SGIP1-202ENST00000320161 MLH3Q9UHC1 1453 aa13.61□□□□□ -0.23
SGIP1-202ENST00000320161 ABCC1P33527 1531 aa13.6□□□□□ -0.23
SGIP1-202ENST00000320161 FYCO1Q9BQS8 1478 aa13.59□□□□□ -0.23
SGIP1-202ENST00000320161 STRCQ7RTU9 1775 aa13.58□□□□□ -0.24
SGIP1-202ENST00000320161 ZNF777Q9ULD5 760 aaPredicted RBP13.57□□□□□ -0.24
SGIP1-202ENST00000320161 AGLP35573 1532 aa13.57□□□□□ -0.24
SGIP1-202ENST00000320161 KIDINS220Q9ULH0 1771 aa13.57□□□□□ -0.24
SGIP1-202ENST00000320161 CNTLNQ9NXG0 1405 aa13.56□□□□□ -0.24
SGIP1-202ENST00000320161 SUPT6HQ7KZ85 1726 aaKnown RBP13.56□□□□□ -0.24
SGIP1-202ENST00000320161 TRAPPC8Q9Y2L5 1435 aa13.55□□□□□ -0.24
SGIP1-202ENST00000320161 MROH2AA6NES4 1674 aa13.54□□□□□ -0.24
SGIP1-202ENST00000320161 SPAG9O60271 1321 aaKnown RBP13.53□□□□□ -0.24
SGIP1-202ENST00000320161 PLEKHH2Q8IVE3 1493 aa13.52□□□□□ -0.25
SGIP1-202ENST00000320161 SYCP2Q9BX26 1530 aa13.52□□□□□ -0.25
SGIP1-202ENST00000320161 SAMD9LQ8IVG5 1584 aa13.52□□□□□ -0.25
SGIP1-202ENST00000320161 CCNB3Q8WWL7 1395 aa13.51□□□□□ -0.25
SGIP1-202ENST00000320161 MTUS2Q5JR59 1369 aa13.5□□□□□ -0.25
SGIP1-202ENST00000320161 CFDP1Q9UEE9 299 aaPredicted RBP13.5□□□□□ -0.25
SGIP1-202ENST00000320161 ATP7AQ04656 1500 aa13.49□□□□□ -0.25
SGIP1-202ENST00000320161 PTPRTO14522 1441 aa13.49□□□□□ -0.25
SGIP1-202ENST00000320161 CLTCQ00610 1675 aaKnown RBP13.49□□□□□ -0.25
SGIP1-202ENST00000320161 ADGBQ8N7X0 1667 aa13.49□□□□□ -0.25
SGIP1-202ENST00000320161 GPATCH8Q9UKJ3 1502 aaKnown RBP13.48□□□□□ -0.25
SGIP1-202ENST00000320161 HNRNPMP52272 730 aaKnown RBP eCLIP13.47□□□□□ -0.25
SGIP1-202ENST00000320161 NPATQ14207 1427 aa13.47□□□□□ -0.25
SGIP1-202ENST00000320161 KIAA1107Q9UPP5 1409 aa13.46□□□□□ -0.26
SGIP1-202ENST00000320161 INO80Q9ULG1 1556 aaPredicted RBP13.45□□□□□ -0.26
SGIP1-202ENST00000320161 A2MP01023 1474 aa13.45□□□□□ -0.26
SGIP1-202ENST00000320161 CAMSAP1Q5T5Y3 1602 aa13.45□□□□□ -0.26
SGIP1-202ENST00000320161 ZMYM3Q14202 1370 aa13.45□□□□□ -0.26
SGIP1-202ENST00000320161 NCOA1Q15788 1441 aa13.44□□□□□ -0.26
SGIP1-202ENST00000320161 DISP3Q9P2K9 1392 aa13.44□□□□□ -0.26
SGIP1-202ENST00000320161 MYO3AQ8NEV4 1616 aa13.43□□□□□ -0.26
SGIP1-202ENST00000320161 GGT6Q6P531 493 aa13.43□□□□□ -0.26
SGIP1-202ENST00000320161 ZNF142P52746 1687 aaPredicted RBP13.43□□□□□ -0.26
SGIP1-202ENST00000320161 EHBP1L1Q8N3D4 1523 aa13.43□□□□□ -0.26
SGIP1-202ENST00000320161 IQSEC2Q5JU85 1478 aa13.42□□□□□ -0.26
SGIP1-202ENST00000320161 PLXNC1O60486 1568 aa13.42□□□□□ -0.26
SGIP1-202ENST00000320161 CEP170BQ9Y4F5 1589 aaPredicted RBP13.4□□□□□ -0.26
SGIP1-202ENST00000320161 TIAM1Q13009 1591 aa13.39□□□□□ -0.27
SGIP1-202ENST00000320161 PKD2Q13563 968 aa13.38□□□□□ -0.27
SGIP1-202ENST00000320161 LTBP4Q8N2S1 1624 aa13.38□□□□□ -0.27
SGIP1-202ENST00000320161 SPATA31D1Q6ZQQ2 1576 aa13.37□□□□□ -0.27
SGIP1-202ENST00000320161 PLA2R1Q13018 1463 aa13.37□□□□□ -0.27
SGIP1-202ENST00000320161 NCKAP5LQ9HCH0 1330 aa13.37□□□□□ -0.27
SGIP1-202ENST00000320161 POLR1AO95602 1720 aaPredicted RBP13.36□□□□□ -0.27
SGIP1-202ENST00000320161 RTEL1-TNFRSF6BF6WH68 1400 aa13.36□□□□□ -0.27
SGIP1-202ENST00000320161 PTPRKQ15262 1439 aa13.36□□□□□ -0.27
SGIP1-202ENST00000320161 CEP162Q5TB80 1403 aa13.35□□□□□ -0.27
SGIP1-202ENST00000320161 RSPH4AQ5TD94 716 aa13.34□□□□□ -0.27
SGIP1-202ENST00000320161 UBAP1LF5GYI3 381 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms