RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 A0A0G2JS52 829 aa21.48■■□□□ 1.03
CLIP4-201ENST00000320081 RCAN3Q9UKA8 241 aa21.47■■□□□ 1.03
CLIP4-201ENST00000320081 RAD54L2Q9Y4B4 1467 aa21.47■■□□□ 1.03
CLIP4-201ENST00000320081 ROCK2O75116 1388 aaKnown RBP21.47■■□□□ 1.03
CLIP4-201ENST00000320081 PRKRIP1Q9H875 184 aaPredicted RBP21.45■■□□□ 1.02
CLIP4-201ENST00000320081 JPH4Q96JJ6 628 aa21.45■■□□□ 1.02
CLIP4-201ENST00000320081 SRPK2P78362 688 aaKnown RBP21.44■■□□□ 1.02
CLIP4-201ENST00000320081 CLUAP1Q96AJ1 413 aa21.43■■□□□ 1.02
CLIP4-201ENST00000320081 MAPK8IP3Q9UPT6 1336 aa21.42■■□□□ 1.02
CLIP4-201ENST00000320081 KIF3BO15066 747 aa21.41■■□□□ 1.02
CLIP4-201ENST00000320081 LMOD2Q6P5Q4 547 aa21.41■■□□□ 1.02
CLIP4-201ENST00000320081 MORC1Q86VD1 984 aa21.41■■□□□ 1.02
CLIP4-201ENST00000320081 DEKP35659 375 aaKnown RBP21.41■■□□□ 1.02
CLIP4-201ENST00000320081 MYH16Q9H6N6 1097 aa21.4■■□□□ 1.02
CLIP4-201ENST00000320081 ANP32BQ92688 251 aaKnown RBP21.39■■□□□ 1.01
CLIP4-201ENST00000320081 ARAP1Q96P48 1450 aa21.38■■□□□ 1.01
CLIP4-201ENST00000320081 KIF21BO75037 1637 aa21.37■■□□□ 1.01
CLIP4-201ENST00000320081 APBB1O00213 710 aa21.37■■□□□ 1.01
CLIP4-201ENST00000320081 RRP7AQ9Y3A4 280 aaKnown RBP21.37■■□□□ 1.01
CLIP4-201ENST00000320081 PDS5BQ9NTI5 1447 aa21.36■■□□□ 1.01
CLIP4-201ENST00000320081 NCLP19338 710 aaKnown RBP21.36■■□□□ 1.01
CLIP4-201ENST00000320081 KTN1Q86UP2 1357 aaKnown RBP21.36■■□□□ 1.01
CLIP4-201ENST00000320081 DDRGK1Q96HY6 314 aa21.35■■□□□ 1.01
CLIP4-201ENST00000320081 NUDCQ9Y266 331 aa21.35■■□□□ 1.01
CLIP4-201ENST00000320081 U2AF1L5P0DN76 240 aaPredicted RBP21.35■■□□□ 1.01
CLIP4-201ENST00000320081 U2AF1Q01081 240 aaKnown RBP eCLIP21.35■■□□□ 1.01
CLIP4-201ENST00000320081 BCL2L13Q9BXK5 485 aa21.35■■□□□ 1.01
CLIP4-201ENST00000320081 SLC4A3P48751 1232 aa21.34■■□□□ 1.01
CLIP4-201ENST00000320081 BECN1Q14457 450 aa21.34■■□□□ 1.01
CLIP4-201ENST00000320081 FANCD2Q9BXW9 1451 aa21.34■■□□□ 1.01
CLIP4-201ENST00000320081 SLKQ9H2G2 1235 aaPredicted RBP21.33■■□□□ 1.01
CLIP4-201ENST00000320081 ANKRD30AQ9BXX3 1397 aa21.33■■□□□ 1
CLIP4-201ENST00000320081 PANK3Q9H999 370 aa21.32■■□□□ 1
CLIP4-201ENST00000320081 NUTM2FA1L443 756 aa21.32■■□□□ 1
CLIP4-201ENST00000320081 FGD5Q6ZNL6 1462 aa21.32■■□□□ 1
CLIP4-201ENST00000320081 CCDC18Q5T9S5 1454 aa21.31■■□□□ 1
CLIP4-201ENST00000320081 TRAK1Q9UPV9 953 aa21.31■■□□□ 1
CLIP4-201ENST00000320081 EXOC6Q8TAG9 804 aa21.3■■□□□ 1
CLIP4-201ENST00000320081 CCDC184Q52MB2 194 aa21.3■■□□□ 1
CLIP4-201ENST00000320081 TAOK2Q9UL54 1235 aa21.29■■□□□ 1
CLIP4-201ENST00000320081 NLRP13Q86W25 1043 aa21.27■■□□□ 1
CLIP4-201ENST00000320081 WASHC2AQ641Q2 1341 aa21.27■■□□□ 1
CLIP4-201ENST00000320081 EFCAB2Q5VUJ9 269 aa21.27■■□□□ 1
CLIP4-201ENST00000320081 SYNJ1O43426 1573 aa21.26■□□□□ 0.99
CLIP4-201ENST00000320081 DNAJC5BQ9UF47 199 aa21.25■□□□□ 0.99
CLIP4-201ENST00000320081 CARMIL2Q6F5E8 1435 aa21.24■□□□□ 0.99
CLIP4-201ENST00000320081 RALBP1Q15311 655 aa21.23■□□□□ 0.99
CLIP4-201ENST00000320081 KIF7Q2M1P5 1343 aa21.22■□□□□ 0.99
CLIP4-201ENST00000320081 USP47Q96K76 1375 aa21.22■□□□□ 0.99
CLIP4-201ENST00000320081 GZF1Q9H116 711 aaPredicted RBP21.21■□□□□ 0.99
CLIP4-201ENST00000320081 ELL2O00472 640 aaPredicted RBP21.2■□□□□ 0.98
CLIP4-201ENST00000320081 AQRO60306 1485 aaKnown RBP eCLIP21.19■□□□□ 0.98
CLIP4-201ENST00000320081 FGD6Q6ZV73 1430 aa21.19■□□□□ 0.98
CLIP4-201ENST00000320081 GOLGA2Q08379 1002 aa21.17■□□□□ 0.98
CLIP4-201ENST00000320081 SPAG9O60271 1321 aaKnown RBP21.17■□□□□ 0.98
CLIP4-201ENST00000320081 NBPF8Q3BBV2 869 aa21.17■□□□□ 0.98
CLIP4-201ENST00000320081 APAF1O14727 1248 aa21.15■□□□□ 0.98
CLIP4-201ENST00000320081 KANK1Q14678 1352 aa21.15■□□□□ 0.98
CLIP4-201ENST00000320081 ITPRIPQ8IWB1 547 aa21.15■□□□□ 0.98
CLIP4-201ENST00000320081 LRRC9Q6ZRR7 1453 aa21.15■□□□□ 0.98
CLIP4-201ENST00000320081 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.15■□□□□ 0.98
CLIP4-201ENST00000320081 CDCA7LQ96GN5 454 aa21.13■□□□□ 0.97
CLIP4-201ENST00000320081 CRBNQ96SW2 442 aa21.13■□□□□ 0.97
CLIP4-201ENST00000320081 NESP48681 1621 aa21.13■□□□□ 0.97
CLIP4-201ENST00000320081 TCERG1O14776 1098 aaKnown RBP21.12■□□□□ 0.97
CLIP4-201ENST00000320081 TRIM44Q96DX7 344 aaPredicted RBP21.12■□□□□ 0.97
CLIP4-201ENST00000320081 IPO9Q96P70 1041 aaKnown RBP21.11■□□□□ 0.97
CLIP4-201ENST00000320081 HSP90AB1P08238 724 aaKnown RBP21.1■□□□□ 0.97
CLIP4-201ENST00000320081 ZBED9Q6R2W3 1325 aa21.1■□□□□ 0.97
CLIP4-201ENST00000320081 PLCB2Q00722 1185 aa21.1■□□□□ 0.97
CLIP4-201ENST00000320081 MYBBP1AQ9BQG0 1328 aaKnown RBP21.1■□□□□ 0.97
CLIP4-201ENST00000320081 GAPVD1Q14C86 1478 aa21.09■□□□□ 0.97
CLIP4-201ENST00000320081 NBPF1Q3BBV0 1214 aa21.09■□□□□ 0.97
CLIP4-201ENST00000320081 FOXD4L1Q9NU39 408 aa21.09■□□□□ 0.97
CLIP4-201ENST00000320081 COG6Q9Y2V7 657 aa21.09■□□□□ 0.97
CLIP4-201ENST00000320081 CCDC7Q96M83 1385 aa21.08■□□□□ 0.97
CLIP4-201ENST00000320081 SMC4Q9NTJ3 1288 aa21.08■□□□□ 0.96
CLIP4-201ENST00000320081 WASHC2CQ9Y4E1 1318 aa21.08■□□□□ 0.96
CLIP4-201ENST00000320081 CCDC144AA2RUR9 1427 aa21.08■□□□□ 0.96
CLIP4-201ENST00000320081 MFAP1P55081 439 aaKnown RBP21.07■□□□□ 0.96
CLIP4-201ENST00000320081 CFTRP13569 1480 aa21.07■□□□□ 0.96
CLIP4-201ENST00000320081 PDE4AP27815 886 aa21.06■□□□□ 0.96
CLIP4-201ENST00000320081 RRP1P56182 461 aaKnown RBP21.06■□□□□ 0.96
CLIP4-201ENST00000320081 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.06■□□□□ 0.96
CLIP4-201ENST00000320081 MYOM3Q5VTT5 1437 aa21.05■□□□□ 0.96
CLIP4-201ENST00000320081 ERICH6BQ5W0A0 696 aa21.04■□□□□ 0.96
CLIP4-201ENST00000320081 PAK3O75914 559 aaPredicted RBP21.03■□□□□ 0.96
CLIP4-201ENST00000320081 KIF15Q9NS87 1388 aa21.03■□□□□ 0.96
CLIP4-201ENST00000320081 GOLGA6L22H0YM25 854 aa21.03■□□□□ 0.96
CLIP4-201ENST00000320081 AFAP1Q8N556 730 aa21.02■□□□□ 0.96
CLIP4-201ENST00000320081 UACAQ9BZF9 1416 aa21.02■□□□□ 0.96
CLIP4-201ENST00000320081 PTPRGP23470 1445 aa21.01■□□□□ 0.95
CLIP4-201ENST00000320081 C11orf95C9JLR9 678 aaPredicted RBP21.01■□□□□ 0.95
CLIP4-201ENST00000320081 NCOA2Q15596 1464 aa21.01■□□□□ 0.95
CLIP4-201ENST00000320081 HAP1P54257 671 aaPredicted RBP21.01■□□□□ 0.95
CLIP4-201ENST00000320081 TMEM132EQ6IEE7 984 aa21.01■□□□□ 0.95
CLIP4-201ENST00000320081 TRHP20396 242 aaPredicted RBP21■□□□□ 0.95
CLIP4-201ENST00000320081 CENPJQ9HC77 1338 aaPredicted RBP21■□□□□ 0.95
CLIP4-201ENST00000320081 OS9Q13438 667 aaPredicted RBP21■□□□□ 0.95
CLIP4-201ENST00000320081 PRXQ9BXM0 1461 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms