RNA–Protein interactions for RNA: ENST00000319234.4

SHISA3-201, Transcript of shisa family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3-201ENST00000319234 DNMT1P26358 1616 aaKnown RBP26.51■■□□□ 1.83
SHISA3-201ENST00000319234 RRP7BPQ9NSQ0 103 aa26.5■■□□□ 1.83
SHISA3-201ENST00000319234 GCC2Q8IWJ2 1684 aa26.5■■□□□ 1.83
SHISA3-201ENST00000319234 ABCC10Q5T3U5 1492 aa26.5■■□□□ 1.83
SHISA3-201ENST00000319234 ABCC5O15440 1437 aa26.5■■□□□ 1.83
SHISA3-201ENST00000319234 ROCK1Q13464 1354 aa26.47■■□□□ 1.83
SHISA3-201ENST00000319234 ABCC2Q92887 1545 aa26.47■■□□□ 1.83
SHISA3-201ENST00000319234 CAMSAP2Q08AD1 1489 aa26.47■■□□□ 1.83
SHISA3-201ENST00000319234 MIER1Q8N108 512 aa26.41■■□□□ 1.82
SHISA3-201ENST00000319234 CDC42BPAQ5VT25 1732 aa26.41■■□□□ 1.82
SHISA3-201ENST00000319234 ZNF777Q9ULD5 760 aaPredicted RBP26.39■■□□□ 1.82
SHISA3-201ENST00000319234 GTF3C3Q9Y5Q9 886 aa26.39■■□□□ 1.82
SHISA3-201ENST00000319234 SIN3AQ96ST3 1273 aa26.38■■□□□ 1.81
SHISA3-201ENST00000319234 UHRF1BP1LA0JNW5 1464 aa26.38■■□□□ 1.81
SHISA3-201ENST00000319234 TIMELESSQ9UNS1 1208 aa26.38■■□□□ 1.81
SHISA3-201ENST00000319234 KDM6BO15054 1643 aa26.34■■□□□ 1.81
SHISA3-201ENST00000319234 TRIM52Q96A61 297 aa26.3■■□□□ 1.8
SHISA3-201ENST00000319234 ADGRL2O95490 1459 aa26.29■■□□□ 1.8
SHISA3-201ENST00000319234 CROCC2H7BZ55 1655 aa26.29■■□□□ 1.8
SHISA3-201ENST00000319234 KDM5BQ9UGL1 1544 aa26.29■■□□□ 1.8
SHISA3-201ENST00000319234 NCOA1Q15788 1441 aa26.28■■□□□ 1.8
SHISA3-201ENST00000319234 ADGBQ8N7X0 1667 aa26.28■■□□□ 1.8
SHISA3-201ENST00000319234 ZCCHC11Q5TAX3 1644 aaKnown RBP26.26■■□□□ 1.79
SHISA3-201ENST00000319234 PREX2Q70Z35 1606 aa26.26■■□□□ 1.79
SHISA3-201ENST00000319234 SHANK2Q9UPX8 1470 aa26.24■■□□□ 1.79
SHISA3-201ENST00000319234 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.24■■□□□ 1.79
SHISA3-201ENST00000319234 OSCARQ8IYS5 282 aa26.24■■□□□ 1.79
SHISA3-201ENST00000319234 ANKRD30AQ9BXX3 1397 aa26.23■■□□□ 1.79
SHISA3-201ENST00000319234 CDC42BPBQ9Y5S2 1711 aa26.22■■□□□ 1.79
SHISA3-201ENST00000319234 MPHOSPH9Q99550 1183 aa26.22■■□□□ 1.79
SHISA3-201ENST00000319234 DENND4BO75064 1496 aaPredicted RBP26.22■■□□□ 1.79
SHISA3-201ENST00000319234 ARHGEF5Q12774 1597 aa26.21■■□□□ 1.79
SHISA3-201ENST00000319234 TTC37Q6PGP7 1564 aa26.21■■□□□ 1.79
SHISA3-201ENST00000319234 YTHDC1Q96MU7 727 aaKnown RBP26.2■■□□□ 1.78
SHISA3-201ENST00000319234 MBD5Q9P267 1494 aa26.19■■□□□ 1.78
SHISA3-201ENST00000319234 SAMD9LQ8IVG5 1584 aa26.19■■□□□ 1.78
SHISA3-201ENST00000319234 TSPY4P0CV99 314 aa26.18■■□□□ 1.78
SHISA3-201ENST00000319234 TSPY10P0CW01 314 aa26.18■■□□□ 1.78
SHISA3-201ENST00000319234 C9orf84Q5VXU9 1444 aa26.18■■□□□ 1.78
SHISA3-201ENST00000319234 PPP1R15AO75807 674 aaPredicted RBP26.17■■□□□ 1.78
SHISA3-201ENST00000319234 HNRNPMP52272 730 aaKnown RBP eCLIP26.17■■□□□ 1.78
SHISA3-201ENST00000319234 RSPH4AQ5TD94 716 aa26.17■■□□□ 1.78
SHISA3-201ENST00000319234 KCNH8Q96L42 1107 aa26.17■■□□□ 1.78
SHISA3-201ENST00000319234 TONSLQ96HA7 1378 aa26.17■■□□□ 1.78
SHISA3-201ENST00000319234 ARHGAP5Q13017 1502 aa26.14■■□□□ 1.78
SHISA3-201ENST00000319234 MYO5CQ9NQX4 1742 aa26.13■■□□□ 1.77
SHISA3-201ENST00000319234 CCDC141Q6ZP82 1450 aa26.13■■□□□ 1.77
SHISA3-201ENST00000319234 ANKRD50Q9ULJ7 1429 aa26.1■■□□□ 1.77
SHISA3-201ENST00000319234 PLCH2O75038 1416 aa26.1■■□□□ 1.77
SHISA3-201ENST00000319234 PLEKHH2Q8IVE3 1493 aa26.09■■□□□ 1.77
SHISA3-201ENST00000319234 KIAA1107Q9UPP5 1409 aa26.08■■□□□ 1.77
SHISA3-201ENST00000319234 SLC4A1APQ9BWU0 796 aaKnown RBP26.07■■□□□ 1.76
SHISA3-201ENST00000319234 SYCP2Q9BX26 1530 aa26.06■■□□□ 1.76
SHISA3-201ENST00000319234 PZPP20742 1482 aa26.05■■□□□ 1.76
SHISA3-201ENST00000319234 ANKRD30BQ9BXX2 1392 aa26.04■■□□□ 1.76
SHISA3-201ENST00000319234 EFCAB2Q5VUJ9 269 aa26.04■■□□□ 1.76
SHISA3-201ENST00000319234 KIF15Q9NS87 1388 aa26.03■■□□□ 1.76
SHISA3-201ENST00000319234 WDR7Q9Y4E6 1490 aa26.03■■□□□ 1.76
SHISA3-201ENST00000319234 FOXD1Q16676 465 aa26.02■■□□□ 1.76
SHISA3-201ENST00000319234 MAST1Q9Y2H9 1570 aa26.02■■□□□ 1.76
SHISA3-201ENST00000319234 ARAP3Q8WWN8 1544 aa25.98■■□□□ 1.75
SHISA3-201ENST00000319234 ARHGEF12Q9NZN5 1544 aa25.96■■□□□ 1.75
SHISA3-201ENST00000319234 RPRD2Q5VT52 1461 aaKnown RBP25.94■■□□□ 1.74
SHISA3-201ENST00000319234 KDM5DQ9BY66 1539 aa25.93■■□□□ 1.74
SHISA3-201ENST00000319234 NUP155O75694 1391 aa25.93■■□□□ 1.74
SHISA3-201ENST00000319234 ABCC1P33527 1531 aa25.92■■□□□ 1.74
SHISA3-201ENST00000319234 ASXL2Q76L83 1435 aa25.92■■□□□ 1.74
SHISA3-201ENST00000319234 NPM1P06748 294 aaKnown RBP eCLIP25.91■■□□□ 1.74
SHISA3-201ENST00000319234 PLXNC1O60486 1568 aa25.9■■□□□ 1.74
SHISA3-201ENST00000319234 PKD2Q13563 968 aa25.9■■□□□ 1.74
SHISA3-201ENST00000319234 ABCA9Q8IUA7 1624 aa25.9■■□□□ 1.74
SHISA3-201ENST00000319234 L3MBTL2Q969R5 705 aa25.87■■□□□ 1.73
SHISA3-201ENST00000319234 TRAPPC8Q9Y2L5 1435 aa25.85■■□□□ 1.73
SHISA3-201ENST00000319234 DNAJC5Q9H3Z4 198 aa25.84■■□□□ 1.73
SHISA3-201ENST00000319234 DUOX2Q9NRD8 1548 aa25.82■■□□□ 1.72
SHISA3-201ENST00000319234 TEX14Q8IWB6 1497 aa25.81■■□□□ 1.72
SHISA3-201ENST00000319234 FANCAO15360 1455 aa25.81■■□□□ 1.72
SHISA3-201ENST00000319234 RTEL1-TNFRSF6BF6WH68 1400 aa25.79■■□□□ 1.72
SHISA3-201ENST00000319234 UNC13BO14795 1591 aa25.78■■□□□ 1.72
SHISA3-201ENST00000319234 ERBINQ96RT1 1412 aa25.77■■□□□ 1.72
SHISA3-201ENST00000319234 SPAG9O60271 1321 aaKnown RBP25.77■■□□□ 1.72
SHISA3-201ENST00000319234 FAM135AQ9P2D6 1515 aa25.77■■□□□ 1.72
SHISA3-201ENST00000319234 AFAP1Q8N556 730 aa25.75■■□□□ 1.71
SHISA3-201ENST00000319234 HIRIP3Q9BW71 556 aaPredicted RBP25.73■■□□□ 1.71
SHISA3-201ENST00000319234 ADGRL1O94910 1474 aa25.71■■□□□ 1.71
SHISA3-201ENST00000319234 ZFYVE16Q7Z3T8 1539 aa25.7■■□□□ 1.71
SHISA3-201ENST00000319234 SCAPERQ9BY12 1400 aa25.7■■□□□ 1.7
SHISA3-201ENST00000319234 MAGI2Q86UL8 1455 aa25.69■■□□□ 1.7
SHISA3-201ENST00000319234 NBPF8Q3BBV2 869 aa25.68■■□□□ 1.7
SHISA3-201ENST00000319234 IQGAP3Q86VI3 1631 aa25.68■■□□□ 1.7
SHISA3-201ENST00000319234 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.67■■□□□ 1.7
SHISA3-201ENST00000319234 DDX10Q13206 875 aaKnown RBP25.66■■□□□ 1.7
SHISA3-201ENST00000319234 CD109Q6YHK3 1445 aa25.65■■□□□ 1.7
SHISA3-201ENST00000319234 EIF4G2P78344 907 aaKnown RBP eCLIP25.65■■□□□ 1.7
SHISA3-201ENST00000319234 INO80Q9ULG1 1556 aaPredicted RBP25.64■■□□□ 1.69
SHISA3-201ENST00000319234 ATP7AQ04656 1500 aa25.64■■□□□ 1.69
SHISA3-201ENST00000319234 HSPA5P11021 654 aaKnown RBP25.64■■□□□ 1.69
SHISA3-201ENST00000319234 CFAP74Q9C0B2 1584 aa25.61■■□□□ 1.69
SHISA3-201ENST00000319234 CYB5RLQ6IPT4 315 aa25.56■■□□□ 1.68
SHISA3-201ENST00000319234 UHRF1BP1Q6BDS2 1440 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms