RNA–Protein interactions for RNA: ENST00000317233.8

AFF3-201, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 8,135 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-201ENST00000317233 TAF7LQ5H9L4 462 aa16.59■□□□□ 0.25
AFF3-201ENST00000317233 TPD52L1Q16890 204 aaPredicted RBP16.58■□□□□ 0.25
AFF3-201ENST00000317233 U2SURPO15042 1029 aaKnown RBP16.58■□□□□ 0.25
AFF3-201ENST00000317233 GPATCH3Q96I76 525 aa16.57■□□□□ 0.24
AFF3-201ENST00000317233 TPM2P07951 284 aa16.57■□□□□ 0.24
AFF3-201ENST00000317233 CSPP1Q1MSJ5 1256 aa16.56■□□□□ 0.24
AFF3-201ENST00000317233 GBP4Q96PP9 640 aa16.56■□□□□ 0.24
AFF3-201ENST00000317233 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.56■□□□□ 0.24
AFF3-201ENST00000317233 SPRYD3Q8NCJ5 442 aa16.55■□□□□ 0.24
AFF3-201ENST00000317233 GPS2Q13227 327 aa16.53■□□□□ 0.24
AFF3-201ENST00000317233 FRAT2O75474 233 aaPredicted RBP16.53■□□□□ 0.24
AFF3-201ENST00000317233 CHMP3Q9Y3E7 222 aa16.53■□□□□ 0.24
AFF3-201ENST00000317233 RGL3Q3MIN7 710 aa16.53■□□□□ 0.24
AFF3-201ENST00000317233 CTDP1Q9Y5B0 961 aaPredicted RBP16.53■□□□□ 0.24
AFF3-201ENST00000317233 NOP58Q9Y2X3 529 aaKnown RBP16.52■□□□□ 0.23
AFF3-201ENST00000317233 HMMRO75330 724 aa16.52■□□□□ 0.23
AFF3-201ENST00000317233 TPM1P09493 284 aa16.51■□□□□ 0.23
AFF3-201ENST00000317233 CCDC9Q9Y3X0 531 aaKnown RBP16.51■□□□□ 0.23
AFF3-201ENST00000317233 CWC22Q9HCG8 908 aaKnown RBP16.51■□□□□ 0.23
AFF3-201ENST00000317233 SOX12O15370 315 aa16.5■□□□□ 0.23
AFF3-201ENST00000317233 PHF14O94880 888 aa16.48■□□□□ 0.23
AFF3-201ENST00000317233 CCAR2Q8N163 923 aaKnown RBP16.48■□□□□ 0.23
AFF3-201ENST00000317233 ODF2Q5BJF6 829 aa16.48■□□□□ 0.23
AFF3-201ENST00000317233 KCNH8Q96L42 1107 aa16.47■□□□□ 0.23
AFF3-201ENST00000317233 TRIM34Q9BYJ4 488 aa16.47■□□□□ 0.23
AFF3-201ENST00000317233 HDGFP51858 240 aaKnown RBP16.47■□□□□ 0.23
AFF3-201ENST00000317233 SF3A1Q15459 793 aaKnown RBP16.45■□□□□ 0.22
AFF3-201ENST00000317233 APBB1O00213 710 aa16.45■□□□□ 0.22
AFF3-201ENST00000317233 GTF2E1P29083 439 aaPredicted RBP16.45■□□□□ 0.22
AFF3-201ENST00000317233 KIF3AQ9Y496 699 aa16.45■□□□□ 0.22
AFF3-201ENST00000317233 MTUS2Q5JR59 1369 aa16.45■□□□□ 0.22
AFF3-201ENST00000317233 PAF1Q8N7H5 531 aa16.44■□□□□ 0.22
AFF3-201ENST00000317233 DCAF8L1A6NGE4 600 aa16.44■□□□□ 0.22
AFF3-201ENST00000317233 CHMP4AQ9BY43 222 aa16.44■□□□□ 0.22
AFF3-201ENST00000317233 CSB-PGBD3P0DP91 1061 aa16.43■□□□□ 0.22
AFF3-201ENST00000317233 SENP3-EIF4A1A0A087X0R7 540 aa16.43■□□□□ 0.22
AFF3-201ENST00000317233 TOMM22Q9NS69 142 aa16.43■□□□□ 0.22
AFF3-201ENST00000317233 CHMP7Q8WUX9 453 aaPredicted RBP16.42■□□□□ 0.22
AFF3-201ENST00000317233 IPO7O95373 1038 aaKnown RBP16.42■□□□□ 0.22
AFF3-201ENST00000317233 PPP4R2Q9NY27 417 aa16.42■□□□□ 0.22
AFF3-201ENST00000317233 HIRIP3Q9BW71 556 aaPredicted RBP16.42■□□□□ 0.22
AFF3-201ENST00000317233 AKAP17AQ02040 695 aaKnown RBP16.41■□□□□ 0.22
AFF3-201ENST00000317233 R3HCC1Q9Y3T6 440 aaKnown RBP16.41■□□□□ 0.22
AFF3-201ENST00000317233 CCDC43Q96MW1 224 aaKnown RBP16.4■□□□□ 0.22
AFF3-201ENST00000317233 CT47A1Q5JQC4 288 aaPredicted RBP16.4■□□□□ 0.22
AFF3-201ENST00000317233 GZF1Q9H116 711 aaPredicted RBP16.4■□□□□ 0.22
AFF3-201ENST00000317233 HDAC5Q9UQL6 1122 aa16.4■□□□□ 0.22
AFF3-201ENST00000317233 MAP7D2Q96T17 732 aa16.4■□□□□ 0.22
AFF3-201ENST00000317233 SUPT16HQ9Y5B9 1047 aaKnown RBP16.4■□□□□ 0.22
AFF3-201ENST00000317233 TRIM6-TRIM34B2RNG4 842 aa16.39■□□□□ 0.21
AFF3-201ENST00000317233 PAK3O75914 559 aaPredicted RBP16.39■□□□□ 0.21
AFF3-201ENST00000317233 PCMTD1Q96MG8 357 aaPredicted RBP16.39■□□□□ 0.21
AFF3-201ENST00000317233 IPO8O15397 1037 aaKnown RBP16.39■□□□□ 0.21
AFF3-201ENST00000317233 CDR1P51861 262 aa16.39■□□□□ 0.21
AFF3-201ENST00000317233 CALD1Q05682 793 aaKnown RBP16.39■□□□□ 0.21
AFF3-201ENST00000317233 APPP05067 770 aa16.38■□□□□ 0.21
AFF3-201ENST00000317233 AMOTL1Q8IY63 956 aa16.38■□□□□ 0.21
AFF3-201ENST00000317233 RDXP35241 583 aaKnown RBP16.37■□□□□ 0.21
AFF3-201ENST00000317233 GOLGA6L19H0YKK7 550 aa16.37■□□□□ 0.21
AFF3-201ENST00000317233 TRHP20396 242 aaPredicted RBP16.37■□□□□ 0.21
AFF3-201ENST00000317233 RAD21O60216 631 aa16.37■□□□□ 0.21
AFF3-201ENST00000317233 RUFY1Q96T51 708 aa16.36■□□□□ 0.21
AFF3-201ENST00000317233 ZRSR2Q15696 482 aaKnown RBP16.36■□□□□ 0.21
AFF3-201ENST00000317233 KIF16BQ96L93 1317 aa16.36■□□□□ 0.21
AFF3-201ENST00000317233 CCDC191Q8NCU4 936 aa16.35■□□□□ 0.21
AFF3-201ENST00000317233 NOL10Q9BSC4 688 aaKnown RBP16.35■□□□□ 0.21
AFF3-201ENST00000317233 TEX35Q5T0J7 233 aa16.35■□□□□ 0.21
AFF3-201ENST00000317233 SRPK2P78362 688 aaKnown RBP16.34■□□□□ 0.21
AFF3-201ENST00000317233 ANKRD20A12PQ8NF67 263 aa16.34■□□□□ 0.21
AFF3-201ENST00000317233 CARD11Q9BXL7 1154 aa16.34■□□□□ 0.21
AFF3-201ENST00000317233 H3BQV1 296 aa16.34■□□□□ 0.21
AFF3-201ENST00000317233 IFFO2Q5TF58 517 aa16.34■□□□□ 0.21
AFF3-201ENST00000317233 CCDC47Q96A33 483 aaKnown RBP16.33■□□□□ 0.2
AFF3-201ENST00000317233 WWC2Q6AWC2 1192 aa16.33■□□□□ 0.2
AFF3-201ENST00000317233 AK7Q96M32 723 aa16.33■□□□□ 0.2
AFF3-201ENST00000317233 CSRNP3Q8WYN3 585 aa16.32■□□□□ 0.2
AFF3-201ENST00000317233 CC2D1BQ5T0F9 858 aaKnown RBP16.32■□□□□ 0.2
AFF3-201ENST00000317233 SPAG9O60271 1321 aaKnown RBP16.32■□□□□ 0.2
AFF3-201ENST00000317233 ZFYVE27Q5T4F4 411 aa16.32■□□□□ 0.2
AFF3-201ENST00000317233 VSIG10Q8N0Z9 540 aa16.31■□□□□ 0.2
AFF3-201ENST00000317233 CHMP4CQ96CF2 233 aa16.31■□□□□ 0.2
AFF3-201ENST00000317233 RRP7BPQ9NSQ0 103 aa16.3■□□□□ 0.2
AFF3-201ENST00000317233 NOM1Q5C9Z4 860 aaKnown RBP16.3■□□□□ 0.2
AFF3-201ENST00000317233 ZNF771Q7L3S4 317 aaPredicted RBP16.29■□□□□ 0.2
AFF3-201ENST00000317233 DCTN1Q14203 1278 aa16.29■□□□□ 0.2
AFF3-201ENST00000317233 MSH5O43196 834 aa16.28■□□□□ 0.2
AFF3-201ENST00000317233 HSP90AB2PQ58FF8 381 aa16.28■□□□□ 0.2
AFF3-201ENST00000317233 SYNE3Q6ZMZ3 975 aa16.28■□□□□ 0.2
AFF3-201ENST00000317233 BECN2A8MW95 431 aa16.27■□□□□ 0.2
AFF3-201ENST00000317233 PLEKHD1A6NEE1 506 aa16.27■□□□□ 0.2
AFF3-201ENST00000317233 CCDC173Q0VFZ6 552 aa16.27■□□□□ 0.2
AFF3-201ENST00000317233 STK31Q9BXU1 1019 aa16.27■□□□□ 0.2
AFF3-201ENST00000317233 B4GALNT3Q6L9W6 998 aa16.27■□□□□ 0.2
AFF3-201ENST00000317233 FAM184AQ8NB25 1140 aa16.27■□□□□ 0.2
AFF3-201ENST00000317233 HOOK1Q9UJC3 728 aaKnown RBP16.27■□□□□ 0.19
AFF3-201ENST00000317233 NAP1L1P55209 391 aaKnown RBP16.26■□□□□ 0.19
AFF3-201ENST00000317233 EPS15P42566 896 aa16.26■□□□□ 0.19
AFF3-201ENST00000317233 GOLGA6L3A6NEY3 463 aa16.26■□□□□ 0.19
AFF3-201ENST00000317233 CCDC97Q96F63 343 aaPredicted RBP16.25■□□□□ 0.19
AFF3-201ENST00000317233 MYO6Q9UM54 1294 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms