RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 ARXQ96QS3 562 aa5.76□□□□□ -1.49
CNOT1-201ENST00000317147 RALBP1Q15311 655 aa5.76□□□□□ -1.49
CNOT1-201ENST00000317147 MAPK8IP3Q9UPT6 1336 aa5.76□□□□□ -1.49
CNOT1-201ENST00000317147 HAP1P54257 671 aaPredicted RBP5.76□□□□□ -1.49
CNOT1-201ENST00000317147 SIN3AQ96ST3 1273 aa5.76□□□□□ -1.49
CNOT1-201ENST00000317147 PHF14O94880 888 aa5.76□□□□□ -1.49
CNOT1-201ENST00000317147 TPM2P07951 284 aa5.76□□□□□ -1.49
CNOT1-201ENST00000317147 A0A0U1RQG5 324 aaPredicted RBP5.76□□□□□ -1.49
CNOT1-201ENST00000317147 FAM43AQ8N2R8 423 aa5.76□□□□□ -1.49
CNOT1-201ENST00000317147 PLEKHH2Q8IVE3 1493 aa5.76□□□□□ -1.49
CNOT1-201ENST00000317147 NINLQ9Y2I6 1382 aa5.75□□□□□ -1.49
CNOT1-201ENST00000317147 ATAD2BQ9ULI0 1458 aa5.75□□□□□ -1.49
CNOT1-201ENST00000317147 NUMA1Q14980 2115 aa5.75□□□□□ -1.49
CNOT1-201ENST00000317147 MYH9P35579 1960 aaKnown RBP5.75□□□□□ -1.49
CNOT1-201ENST00000317147 MYH6P13533 1939 aa5.75□□□□□ -1.49
CNOT1-201ENST00000317147 IL27Q8NEV9 243 aa5.75□□□□□ -1.49
CNOT1-201ENST00000317147 WDR43Q15061 677 aaKnown RBP eCLIP5.75□□□□□ -1.49
CNOT1-201ENST00000317147 MYO9BQ13459 2157 aa5.75□□□□□ -1.49
CNOT1-201ENST00000317147 KAT6AQ92794 2004 aa5.75□□□□□ -1.49
CNOT1-201ENST00000317147 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.75□□□□□ -1.49
CNOT1-201ENST00000317147 MYO18AQ92614 2054 aaKnown RBP5.74□□□□□ -1.49
CNOT1-201ENST00000317147 CALRP27797 417 aaKnown RBP5.74□□□□□ -1.49
CNOT1-201ENST00000317147 KIAA2012Q0VF49 1180 aa5.74□□□□□ -1.49
CNOT1-201ENST00000317147 UBE2Q2Q8WVN8 375 aa5.74□□□□□ -1.49
CNOT1-201ENST00000317147 ANKRD30AQ9BXX3 1397 aa5.74□□□□□ -1.49
CNOT1-201ENST00000317147 RUSC2Q8N2Y8 1516 aa5.73□□□□□ -1.49
CNOT1-201ENST00000317147 HSCBQ8IWL3 235 aa5.73□□□□□ -1.49
CNOT1-201ENST00000317147 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.73□□□□□ -1.493e-6■□□□□ 9.8
CNOT1-201ENST00000317147 EFCAB5A4FU69 1503 aa5.72□□□□□ -1.49
CNOT1-201ENST00000317147 CNTLNQ9NXG0 1405 aa5.72□□□□□ -1.49
CNOT1-201ENST00000317147 HMGXB3Q12766 1538 aa5.72□□□□□ -1.49
CNOT1-201ENST00000317147 PRKCSHP14314 528 aaPredicted RBP5.72□□□□□ -1.49
CNOT1-201ENST00000317147 DHX8Q14562 1220 aaKnown RBP5.72□□□□□ -1.49
CNOT1-201ENST00000317147 SCAPERQ9BY12 1400 aa5.72□□□□□ -1.49
CNOT1-201ENST00000317147 NUDCQ9Y266 331 aa5.72□□□□□ -1.49
CNOT1-201ENST00000317147 BAZ2BQ9UIF8 2168 aaKnown RBP5.71□□□□□ -1.49
CNOT1-201ENST00000317147 PTMAP06454 111 aaKnown RBP5.71□□□□□ -1.49
CNOT1-201ENST00000317147 KIF21AQ7Z4S6 1674 aa5.71□□□□□ -1.5
CNOT1-201ENST00000317147 TSPYL1Q9H0U9 437 aa5.71□□□□□ -1.5
CNOT1-201ENST00000317147 NINQ8N4C6 2090 aa5.71□□□□□ -1.5
CNOT1-201ENST00000317147 RRBP1Q9P2E9 1410 aaKnown RBP5.71□□□□□ -1.5
CNOT1-201ENST00000317147 DHX57Q6P158 1386 aaKnown RBP5.71□□□□□ -1.5
CNOT1-201ENST00000317147 HMGN5P82970 282 aaKnown RBP5.7□□□□□ -1.5
CNOT1-201ENST00000317147 PKNOX2Q96KN3 472 aa5.7□□□□□ -1.5
CNOT1-201ENST00000317147 CENPQQ7L2Z9 268 aaPredicted RBP5.7□□□□□ -1.5
CNOT1-201ENST00000317147 WDR97A6NE52 1622 aa5.7□□□□□ -1.5
CNOT1-201ENST00000317147 KIF15Q9NS87 1388 aa5.69□□□□□ -1.5
CNOT1-201ENST00000317147 KANK4Q5T7N3 995 aaPredicted RBP5.69□□□□□ -1.5
CNOT1-201ENST00000317147 SUPT6HQ7KZ85 1726 aaKnown RBP5.69□□□□□ -1.5
CNOT1-201ENST00000317147 TPM3P06753 285 aa5.69□□□□□ -1.5
CNOT1-201ENST00000317147 DNTTIP2Q5QJE6 756 aaKnown RBP5.69□□□□□ -1.5
CNOT1-201ENST00000317147 RAB3GAP2Q9H2M9 1393 aa5.69□□□□□ -1.5
CNOT1-201ENST00000317147 ANO8Q9HCE9 1232 aaPredicted RBP5.69□□□□□ -1.5
CNOT1-201ENST00000317147 CCDC66A2RUB6 948 aa5.68□□□□□ -1.5
CNOT1-201ENST00000317147 WASHC2AQ641Q2 1341 aa5.68□□□□□ -1.5
CNOT1-201ENST00000317147 WASHC2CQ9Y4E1 1318 aa5.68□□□□□ -1.5
CNOT1-201ENST00000317147 RAPGEF2Q9Y4G8 1499 aa5.68□□□□□ -1.5
CNOT1-201ENST00000317147 HTATSF1O43719 755 aaKnown RBP5.68□□□□□ -1.5
CNOT1-201ENST00000317147 MYH8P13535 1937 aa5.68□□□□□ -1.5
CNOT1-201ENST00000317147 CCDC144AA2RUR9 1427 aa5.68□□□□□ -1.5
CNOT1-201ENST00000317147 CROCCQ5TZA2 2017 aa5.67□□□□□ -1.5
CNOT1-201ENST00000317147 PMFBP1Q8TBY8 1022 aa5.67□□□□□ -1.5
CNOT1-201ENST00000317147 CFAP53Q96M91 514 aa5.67□□□□□ -1.5
CNOT1-201ENST00000317147 CHIC2Q9UKJ5 165 aa5.67□□□□□ -1.5
CNOT1-201ENST00000317147 C11orf95C9JLR9 678 aaPredicted RBP5.67□□□□□ -1.5
CNOT1-201ENST00000317147 CHMP4AQ9BY43 222 aa5.67□□□□□ -1.5
CNOT1-201ENST00000317147 CGNL1Q0VF96 1302 aa5.67□□□□□ -1.5
CNOT1-201ENST00000317147 ZRSR1Q15695 479 aaKnown RBP5.67□□□□□ -1.5
CNOT1-201ENST00000317147 GOLGA6L1Q8N7Z2 621 aa5.67□□□□□ -1.5
CNOT1-201ENST00000317147 CHMP4CQ96CF2 233 aa5.67□□□□□ -1.5
CNOT1-201ENST00000317147 CUX2O14529 1486 aa5.67□□□□□ -1.5
CNOT1-201ENST00000317147 FYCO1Q9BQS8 1478 aa5.67□□□□□ -1.5
CNOT1-201ENST00000317147 UACAQ9BZF9 1416 aa5.67□□□□□ -1.5
CNOT1-201ENST00000317147 ARID3CA6NKF2 412 aa5.67□□□□□ -1.5
CNOT1-201ENST00000317147 FAM161AQ3B820 660 aa5.67□□□□□ -1.5
CNOT1-201ENST00000317147 CAVIN1Q6NZI2 390 aaKnown RBP5.67□□□□□ -1.5
CNOT1-201ENST00000317147 MIA2Q96PC5 1412 aa5.67□□□□□ -1.5
CNOT1-201ENST00000317147 MYH15Q9Y2K3 1946 aa5.67□□□□□ -1.5
CNOT1-201ENST00000317147 MRE11P49959 708 aa5.66□□□□□ -1.5
CNOT1-201ENST00000317147 MCCP23508 829 aa5.66□□□□□ -1.5
CNOT1-201ENST00000317147 MYH11P35749 1972 aa5.66□□□□□ -1.5
CNOT1-201ENST00000317147 PDIA4P13667 645 aaKnown RBP5.66□□□□□ -1.5
CNOT1-201ENST00000317147 MSH5O43196 834 aa5.66□□□□□ -1.5
CNOT1-201ENST00000317147 THOC2Q8NI27 1593 aaKnown RBP5.66□□□□□ -1.5
CNOT1-201ENST00000317147 KIF16BQ96L93 1317 aa5.66□□□□□ -1.5
CNOT1-201ENST00000317147 PRDM2Q13029 1718 aa5.66□□□□□ -1.5
CNOT1-201ENST00000317147 RCAN3Q9UKA8 241 aa5.66□□□□□ -1.5
CNOT1-201ENST00000317147 KNSTRNQ9Y448 316 aa5.66□□□□□ -1.5
CNOT1-201ENST00000317147 NOM1Q5C9Z4 860 aaKnown RBP5.65□□□□□ -1.5
CNOT1-201ENST00000317147 SLC4A1APQ9BWU0 796 aaKnown RBP5.65□□□□□ -1.5
CNOT1-201ENST00000317147 ATP6V1DQ9Y5K8 247 aa5.65□□□□□ -1.5
CNOT1-201ENST00000317147 SMG6Q86US8 1419 aaKnown RBP5.65□□□□□ -1.5
CNOT1-201ENST00000317147 STAC3Q96MF2 364 aa5.65□□□□□ -1.5
CNOT1-201ENST00000317147 NLRP13Q86W25 1043 aa5.65□□□□□ -1.5
CNOT1-201ENST00000317147 RWDD1Q9H446 243 aaPredicted RBP5.65□□□□□ -1.5
CNOT1-201ENST00000317147 TOP2BQ02880 1626 aa5.65□□□□□ -1.51
CNOT1-201ENST00000317147 CALD1Q05682 793 aaKnown RBP5.65□□□□□ -1.51
CNOT1-201ENST00000317147 GPS2Q13227 327 aa5.65□□□□□ -1.51
CNOT1-201ENST00000317147 KNL1Q8NG31 2342 aa5.65□□□□□ -1.51
CNOT1-201ENST00000317147 POLR1AO95602 1720 aaPredicted RBP5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms