RNA–Protein interactions for RNA: ENST00000316341.7

SLC12A4-201, Transcript of solute carrier family 12 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC12A4, Length 4,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-201ENST00000316341 CCDC184Q52MB2 194 aa23.64■■□□□ 1.38
SLC12A4-201ENST00000316341 FTSJ3Q8IY81 847 aaKnown RBP23.63■■□□□ 1.37
SLC12A4-201ENST00000316341 RALBP1Q15311 655 aa23.63■■□□□ 1.37
SLC12A4-201ENST00000316341 PAK3O75914 559 aaPredicted RBP23.63■■□□□ 1.37
SLC12A4-201ENST00000316341 ST20-MTHFSA0A0A6YYL1 179 aa23.62■■□□□ 1.37
SLC12A4-201ENST00000316341 IGF1RP08069 1367 aa23.61■■□□□ 1.37
SLC12A4-201ENST00000316341 CDCA8Q53HL2 280 aa23.61■■□□□ 1.37
SLC12A4-201ENST00000316341 NUP155O75694 1391 aa23.6■■□□□ 1.37
SLC12A4-201ENST00000316341 NCLP19338 710 aaKnown RBP23.59■■□□□ 1.37
SLC12A4-201ENST00000316341 ROCK2O75116 1388 aaKnown RBP23.58■■□□□ 1.37
SLC12A4-201ENST00000316341 WDR97A6NE52 1622 aa23.58■■□□□ 1.36
SLC12A4-201ENST00000316341 RRP1P56182 461 aaKnown RBP23.57■■□□□ 1.36
SLC12A4-201ENST00000316341 NLRP13Q86W25 1043 aa23.57■■□□□ 1.36
SLC12A4-201ENST00000316341 GZF1Q9H116 711 aaPredicted RBP23.57■■□□□ 1.36
SLC12A4-201ENST00000316341 KIF7Q2M1P5 1343 aa23.57■■□□□ 1.36
SLC12A4-201ENST00000316341 LRRC9Q6ZRR7 1453 aa23.56■■□□□ 1.36
SLC12A4-201ENST00000316341 CCDC7Q96M83 1385 aa23.55■■□□□ 1.36
SLC12A4-201ENST00000316341 STAG3Q9UJ98 1225 aa23.52■■□□□ 1.36
SLC12A4-201ENST00000316341 CCDC146Q8IYE0 955 aa23.51■■□□□ 1.35
SLC12A4-201ENST00000316341 ARID4BQ4LE39 1312 aaPredicted RBP23.51■■□□□ 1.35
SLC12A4-201ENST00000316341 CFAP53Q96M91 514 aa23.51■■□□□ 1.35
SLC12A4-201ENST00000316341 CRBNQ96SW2 442 aa23.51■■□□□ 1.35
SLC12A4-201ENST00000316341 FGD6Q6ZV73 1430 aa23.51■■□□□ 1.35
SLC12A4-201ENST00000316341 MYH16Q9H6N6 1097 aa23.49■■□□□ 1.35
SLC12A4-201ENST00000316341 USP47Q96K76 1375 aa23.49■■□□□ 1.35
SLC12A4-201ENST00000316341 UACAQ9BZF9 1416 aa23.49■■□□□ 1.35
SLC12A4-201ENST00000316341 MYBBP1AQ9BQG0 1328 aaKnown RBP23.48■■□□□ 1.35
SLC12A4-201ENST00000316341 CNTLNQ9NXG0 1405 aa23.48■■□□□ 1.35
SLC12A4-201ENST00000316341 TPRNQ4KMQ1 711 aa23.47■■□□□ 1.35
SLC12A4-201ENST00000316341 CADPSQ9ULU8 1353 aa23.47■■□□□ 1.35
SLC12A4-201ENST00000316341 GOLGA6L22H0YM25 854 aa23.46■■□□□ 1.35
SLC12A4-201ENST00000316341 PDE3BQ13370 1112 aa23.45■■□□□ 1.34
SLC12A4-201ENST00000316341 KIF15Q9NS87 1388 aa23.45■■□□□ 1.34
SLC12A4-201ENST00000316341 AKNAQ7Z591 1439 aa23.44■■□□□ 1.34
SLC12A4-201ENST00000316341 U2SURPO15042 1029 aaKnown RBP23.44■■□□□ 1.34
SLC12A4-201ENST00000316341 GSE1Q14687 1217 aa23.44■■□□□ 1.34
SLC12A4-201ENST00000316341 GOLGA2Q08379 1002 aa23.43■■□□□ 1.34
SLC12A4-201ENST00000316341 USP35Q9P2H5 1018 aa23.43■■□□□ 1.34
SLC12A4-201ENST00000316341 HSP90AB1P08238 724 aaKnown RBP23.42■■□□□ 1.34
SLC12A4-201ENST00000316341 ZNF644Q9H582 1327 aaPredicted RBP23.41■■□□□ 1.34
SLC12A4-201ENST00000316341 CLUAP1Q96AJ1 413 aa23.41■■□□□ 1.34
SLC12A4-201ENST00000316341 PRXQ9BXM0 1461 aa23.41■■□□□ 1.34
SLC12A4-201ENST00000316341 PANK3Q9H999 370 aa23.4■■□□□ 1.34
SLC12A4-201ENST00000316341 IL27Q8NEV9 243 aa23.4■■□□□ 1.34
SLC12A4-201ENST00000316341 HNRNPMP52272 730 aaKnown RBP eCLIP23.4■■□□□ 1.34
SLC12A4-201ENST00000316341 L1TD1Q5T7N2 865 aaKnown RBP23.4■■□□□ 1.34
SLC12A4-201ENST00000316341 ANKRD30AQ9BXX3 1397 aa23.39■■□□□ 1.33
SLC12A4-201ENST00000316341 MAPK8IP3Q9UPT6 1336 aa23.37■■□□□ 1.33
SLC12A4-201ENST00000316341 HSCBQ8IWL3 235 aa23.37■■□□□ 1.33
SLC12A4-201ENST00000316341 NBPF8Q3BBV2 869 aa23.37■■□□□ 1.33
SLC12A4-201ENST00000316341 MORC1Q86VD1 984 aa23.36■■□□□ 1.33
SLC12A4-201ENST00000316341 ANO8Q9HCE9 1232 aaPredicted RBP23.36■■□□□ 1.33
SLC12A4-201ENST00000316341 CDCA7LQ96GN5 454 aa23.35■■□□□ 1.33
SLC12A4-201ENST00000316341 ERICH3Q5RHP9 1530 aa23.34■■□□□ 1.33
SLC12A4-201ENST00000316341 FAM161AQ3B820 660 aa23.34■■□□□ 1.33
SLC12A4-201ENST00000316341 FGD5Q6ZNL6 1462 aa23.33■■□□□ 1.33
SLC12A4-201ENST00000316341 MYOM3Q5VTT5 1437 aa23.33■■□□□ 1.33
SLC12A4-201ENST00000316341 SAFB2Q14151 953 aaKnown RBP eCLIP23.32■■□□□ 1.32
SLC12A4-201ENST00000316341 MFAP1P55081 439 aaKnown RBP23.31■■□□□ 1.32
SLC12A4-201ENST00000316341 CENPQQ7L2Z9 268 aaPredicted RBP23.31■■□□□ 1.32
SLC12A4-201ENST00000316341 PTMAP06454 111 aaKnown RBP23.31■■□□□ 1.32
SLC12A4-201ENST00000316341 RAD54L2Q9Y4B4 1467 aa23.3■■□□□ 1.32
SLC12A4-201ENST00000316341 MS4A1P11836 297 aa23.3■■□□□ 1.32
SLC12A4-201ENST00000316341 PNNQ9H307 717 aaKnown RBP23.3■■□□□ 1.32
SLC12A4-201ENST00000316341 BCL2L13Q9BXK5 485 aa23.29■■□□□ 1.32
SLC12A4-201ENST00000316341 C11orf95C9JLR9 678 aaPredicted RBP23.29■■□□□ 1.32
SLC12A4-201ENST00000316341 RRP7AQ9Y3A4 280 aaKnown RBP23.28■■□□□ 1.32
SLC12A4-201ENST00000316341 NFKBIBQ15653 356 aa23.28■■□□□ 1.32
SLC12A4-201ENST00000316341 PLPPR3Q6T4P5 718 aa23.27■■□□□ 1.31
SLC12A4-201ENST00000316341 BRPF3Q9ULD4 1205 aa23.27■■□□□ 1.31
SLC12A4-201ENST00000316341 DNTTIP2Q5QJE6 756 aaKnown RBP23.26■■□□□ 1.31
SLC12A4-201ENST00000316341 NCOA2Q15596 1464 aa23.25■■□□□ 1.31
SLC12A4-201ENST00000316341 U2AF1L5P0DN76 240 aaPredicted RBP23.25■■□□□ 1.31
SLC12A4-201ENST00000316341 U2AF1Q01081 240 aaKnown RBP eCLIP23.25■■□□□ 1.31
SLC12A4-201ENST00000316341 NPM1P06748 294 aaKnown RBP eCLIP23.24■■□□□ 1.31
SLC12A4-201ENST00000316341 COG6Q9Y2V7 657 aa23.24■■□□□ 1.31
SLC12A4-201ENST00000316341 GOLGA6L3A6NEY3 463 aa23.24■■□□□ 1.31
SLC12A4-201ENST00000316341 CENPJQ9HC77 1338 aaPredicted RBP23.24■■□□□ 1.31
SLC12A4-201ENST00000316341 RWDD1Q9H446 243 aaPredicted RBP23.23■■□□□ 1.31
SLC12A4-201ENST00000316341 ITPRIPQ8IWB1 547 aa23.23■■□□□ 1.31
SLC12A4-201ENST00000316341 FOXD4L1Q9NU39 408 aa23.22■■□□□ 1.31
SLC12A4-201ENST00000316341 APAF1O14727 1248 aa23.22■■□□□ 1.31
SLC12A4-201ENST00000316341 ZBTB7CA1YPR0 619 aa23.21■■□□□ 1.31
SLC12A4-201ENST00000316341 CASKIN1Q8WXD9 1431 aa23.21■■□□□ 1.31
SLC12A4-201ENST00000316341 TIAM1Q13009 1591 aa23.2■■□□□ 1.3
SLC12A4-201ENST00000316341 CFTRP13569 1480 aa23.2■■□□□ 1.3
SLC12A4-201ENST00000316341 SKAP1Q86WV1 359 aa23.2■■□□□ 1.3
SLC12A4-201ENST00000316341 FANCD2Q9BXW9 1451 aa23.19■■□□□ 1.3
SLC12A4-201ENST00000316341 PLCB2Q00722 1185 aa23.19■■□□□ 1.3
SLC12A4-201ENST00000316341 PNISRQ8TF01 805 aaKnown RBP23.19■■□□□ 1.3
SLC12A4-201ENST00000316341 APBB1O00213 710 aa23.18■■□□□ 1.3
SLC12A4-201ENST00000316341 ARID3AQ99856 593 aa23.18■■□□□ 1.3
SLC12A4-201ENST00000316341 PMFBP1Q8TBY8 1022 aa23.16■■□□□ 1.3
SLC12A4-201ENST00000316341 TOP2BQ02880 1626 aa23.16■■□□□ 1.3
SLC12A4-201ENST00000316341 HFM1A2PYH4 1435 aa23.15■■□□□ 1.3
SLC12A4-201ENST00000316341 ESF1Q9H501 851 aaKnown RBP23.15■■□□□ 1.3
SLC12A4-201ENST00000316341 BACH2Q9BYV9 841 aa23.14■■□□□ 1.3
SLC12A4-201ENST00000316341 POGKQ9P215 609 aa23.14■■□□□ 1.3
SLC12A4-201ENST00000316341 SMC4Q9NTJ3 1288 aa23.14■■□□□ 1.29
SLC12A4-201ENST00000316341 PLEKHG5O94827 1062 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms