RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 SLC4A1APQ9BWU0 796 aaKnown RBP10.89□□□□□ -0.67
TRIM55-202ENST00000315962 CHD1O14646 1710 aa10.89□□□□□ -0.67
TRIM55-202ENST00000315962 KIF14Q15058 1648 aa10.88□□□□□ -0.67
TRIM55-202ENST00000315962 BCANQ96GW7 911 aa10.88□□□□□ -0.67
TRIM55-202ENST00000315962 ABCC5O15440 1437 aa10.88□□□□□ -0.67
TRIM55-202ENST00000315962 GPATCH8Q9UKJ3 1502 aaKnown RBP10.87□□□□□ -0.67
TRIM55-202ENST00000315962 KDM6BO15054 1643 aa10.87□□□□□ -0.67
TRIM55-202ENST00000315962 TONSLQ96HA7 1378 aa10.86□□□□□ -0.67
TRIM55-202ENST00000315962 DAPK1P53355 1430 aa10.86□□□□□ -0.67
TRIM55-202ENST00000315962 DDX10Q13206 875 aaKnown RBP10.86□□□□□ -0.67
TRIM55-202ENST00000315962 MIA2Q96PC5 1412 aa10.85□□□□□ -0.67
TRIM55-202ENST00000315962 PPP1R15AO75807 674 aaPredicted RBP10.85□□□□□ -0.67
TRIM55-202ENST00000315962 ZNF326Q5BKZ1 582 aaKnown RBP10.85□□□□□ -0.67
TRIM55-202ENST00000315962 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.85□□□□□ -0.67
TRIM55-202ENST00000315962 TSPY4P0CV99 314 aa10.85□□□□□ -0.67
TRIM55-202ENST00000315962 TSPY10P0CW01 314 aa10.85□□□□□ -0.67
TRIM55-202ENST00000315962 UACAQ9BZF9 1416 aa10.85□□□□□ -0.67
TRIM55-202ENST00000315962 SUPT16HQ9Y5B9 1047 aaKnown RBP10.84□□□□□ -0.67
TRIM55-202ENST00000315962 CAMSAP2Q08AD1 1489 aa10.83□□□□□ -0.68
TRIM55-202ENST00000315962 MYT1LQ9UL68 1186 aa10.82□□□□□ -0.68
TRIM55-202ENST00000315962 OSCARQ8IYS5 282 aa10.82□□□□□ -0.68
TRIM55-202ENST00000315962 TCOF1Q13428 1488 aaKnown RBP10.82□□□□□ -0.68
TRIM55-202ENST00000315962 ABCA8O94911 1581 aa10.82□□□□□ -0.68
TRIM55-202ENST00000315962 L3MBTL2Q969R5 705 aa10.81□□□□□ -0.68
TRIM55-202ENST00000315962 PKD2Q13563 968 aa10.81□□□□□ -0.68
TRIM55-202ENST00000315962 CNGB1Q14028 1251 aaPredicted RBP10.8□□□□□ -0.68
TRIM55-202ENST00000315962 DENND4BO75064 1496 aaPredicted RBP10.79□□□□□ -0.68
TRIM55-202ENST00000315962 AFAP1Q8N556 730 aa10.79□□□□□ -0.68
TRIM55-202ENST00000315962 NCOA1Q15788 1441 aa10.79□□□□□ -0.68
TRIM55-202ENST00000315962 KDM2AQ9Y2K7 1162 aa10.78□□□□□ -0.68
TRIM55-202ENST00000315962 NUP155O75694 1391 aa10.77□□□□□ -0.69
TRIM55-202ENST00000315962 AKNAQ7Z591 1439 aa10.76□□□□□ -0.69
TRIM55-202ENST00000315962 ANKRD30AQ9BXX3 1397 aa10.76□□□□□ -0.69
TRIM55-202ENST00000315962 ABCC10Q5T3U5 1492 aa10.75□□□□□ -0.69
TRIM55-202ENST00000315962 CYB5RLQ6IPT4 315 aa10.75□□□□□ -0.69
TRIM55-202ENST00000315962 RGL3Q3MIN7 710 aa10.74□□□□□ -0.69
TRIM55-202ENST00000315962 POLR3GLQ9BT43 218 aa10.74□□□□□ -0.69
TRIM55-202ENST00000315962 ANKRD50Q9ULJ7 1429 aa10.74□□□□□ -0.69
TRIM55-202ENST00000315962 C9orf84Q5VXU9 1444 aa10.74□□□□□ -0.69
TRIM55-202ENST00000315962 NBPF8Q3BBV2 869 aa10.74□□□□□ -0.69
TRIM55-202ENST00000315962 KIF15Q9NS87 1388 aa10.74□□□□□ -0.69
TRIM55-202ENST00000315962 ARHGAP5Q13017 1502 aa10.73□□□□□ -0.69
TRIM55-202ENST00000315962 TSHZ2Q9NRE2 1034 aa10.73□□□□□ -0.69
TRIM55-202ENST00000315962 ROCK1Q13464 1354 aa10.73□□□□□ -0.69
TRIM55-202ENST00000315962 DNMT1P26358 1616 aaKnown RBP10.72□□□□□ -0.69
TRIM55-202ENST00000315962 NPM1P06748 294 aaKnown RBP eCLIP10.71□□□□□ -0.69
TRIM55-202ENST00000315962 HSPA5P11021 654 aaKnown RBP10.71□□□□□ -0.69
TRIM55-202ENST00000315962 EFCAB2Q5VUJ9 269 aa10.71□□□□□ -0.69
TRIM55-202ENST00000315962 ABCC2Q92887 1545 aa10.71□□□□□ -0.7
TRIM55-202ENST00000315962 TIMELESSQ9UNS1 1208 aa10.71□□□□□ -0.7
TRIM55-202ENST00000315962 ANKRD30BQ9BXX2 1392 aa10.7□□□□□ -0.7
TRIM55-202ENST00000315962 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.7□□□□□ -0.7
TRIM55-202ENST00000315962 TTC37Q6PGP7 1564 aa10.7□□□□□ -0.7
TRIM55-202ENST00000315962 CLASP1Q7Z460 1538 aa10.7□□□□□ -0.7
TRIM55-202ENST00000315962 MBD5Q9P267 1494 aa10.69□□□□□ -0.7
TRIM55-202ENST00000315962 SHROOM2Q13796 1616 aa10.69□□□□□ -0.7
TRIM55-202ENST00000315962 SYCP2Q9BX26 1530 aa10.69□□□□□ -0.7
TRIM55-202ENST00000315962 CDC42BPAQ5VT25 1732 aa10.69□□□□□ -0.7
TRIM55-202ENST00000315962 C11orf95C9JLR9 678 aaPredicted RBP10.68□□□□□ -0.7
TRIM55-202ENST00000315962 FKBP8Q14318 412 aa10.68□□□□□ -0.7
TRIM55-202ENST00000315962 DCAF11Q8TEB1 546 aa10.68□□□□□ -0.7
TRIM55-202ENST00000315962 ARHGEF12Q9NZN5 1544 aa10.67□□□□□ -0.7
TRIM55-202ENST00000315962 PZPP20742 1482 aa10.67□□□□□ -0.7
TRIM55-202ENST00000315962 SENP3Q9H4L4 574 aaPredicted RBP10.67□□□□□ -0.7
TRIM55-202ENST00000315962 TRAPPC8Q9Y2L5 1435 aa10.66□□□□□ -0.7
TRIM55-202ENST00000315962 SAMD9LQ8IVG5 1584 aa10.66□□□□□ -0.7
TRIM55-202ENST00000315962 EIF4G2P78344 907 aaKnown RBP eCLIP10.65□□□□□ -0.7
TRIM55-202ENST00000315962 ITSN2Q9NZM3 1697 aa10.65□□□□□ -0.7
TRIM55-202ENST00000315962 SPAG9O60271 1321 aaKnown RBP10.65□□□□□ -0.7
TRIM55-202ENST00000315962 GCC2Q8IWJ2 1684 aa10.65□□□□□ -0.7
TRIM55-202ENST00000315962 CCDC141Q6ZP82 1450 aa10.64□□□□□ -0.71
TRIM55-202ENST00000315962 PLEKHH2Q8IVE3 1493 aa10.64□□□□□ -0.71
TRIM55-202ENST00000315962 ADCY10Q96PN6 1610 aa10.64□□□□□ -0.71
TRIM55-202ENST00000315962 ZCCHC11Q5TAX3 1644 aaKnown RBP10.64□□□□□ -0.71
TRIM55-202ENST00000315962 PLCH2O75038 1416 aa10.64□□□□□ -0.71
TRIM55-202ENST00000315962 WASHC2AQ641Q2 1341 aa10.63□□□□□ -0.71
TRIM55-202ENST00000315962 CDC42BPBQ9Y5S2 1711 aa10.63□□□□□ -0.71
TRIM55-202ENST00000315962 ASXL2Q76L83 1435 aa10.63□□□□□ -0.71
TRIM55-202ENST00000315962 KDM5BQ9UGL1 1544 aa10.63□□□□□ -0.71
TRIM55-202ENST00000315962 KIF3BO15066 747 aa10.63□□□□□ -0.71
TRIM55-202ENST00000315962 RAPGEF3O95398 923 aa10.63□□□□□ -0.71
TRIM55-202ENST00000315962 SENP3-EIF4A1A0A087X0R7 540 aa10.62□□□□□ -0.71
TRIM55-202ENST00000315962 RSPH4AQ5TD94 716 aa10.62□□□□□ -0.71
TRIM55-202ENST00000315962 SCAPERQ9BY12 1400 aa10.62□□□□□ -0.71
TRIM55-202ENST00000315962 KIAA1107Q9UPP5 1409 aa10.62□□□□□ -0.71
TRIM55-202ENST00000315962 RPRD2Q5VT52 1461 aaKnown RBP10.61□□□□□ -0.71
TRIM55-202ENST00000315962 ADGRL2O95490 1459 aa10.6□□□□□ -0.71
TRIM55-202ENST00000315962 ANP32CO43423 234 aa10.6□□□□□ -0.71
TRIM55-202ENST00000315962 IRX6P78412 446 aaPredicted RBP10.6□□□□□ -0.71
TRIM55-202ENST00000315962 WDR7Q9Y4E6 1490 aa10.6□□□□□ -0.71
TRIM55-202ENST00000315962 GGT6Q6P531 493 aa10.59□□□□□ -0.71
TRIM55-202ENST00000315962 FANCAO15360 1455 aa10.58□□□□□ -0.72
TRIM55-202ENST00000315962 NBPF1Q3BBV0 1214 aa10.58□□□□□ -0.72
TRIM55-202ENST00000315962 CARD11Q9BXL7 1154 aa10.58□□□□□ -0.72
TRIM55-202ENST00000315962 PREX2Q70Z35 1606 aa10.58□□□□□ -0.72
TRIM55-202ENST00000315962 PRKCSHP14314 528 aaPredicted RBP10.57□□□□□ -0.72
TRIM55-202ENST00000315962 ANP32EQ9BTT0 268 aa10.57□□□□□ -0.72
TRIM55-202ENST00000315962 UHRF1BP1LA0JNW5 1464 aa10.57□□□□□ -0.72
TRIM55-202ENST00000315962 TEX14Q8IWB6 1497 aa10.56□□□□□ -0.72
TRIM55-202ENST00000315962 ST20-MTHFSA0A0A6YYL1 179 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms