RNA–Protein interactions for RNA: ENST00000315050.11

TNIP1-201, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNIP1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-201ENST00000315050 WDR62O43379 1518 aa17.51■□□□□ 0.39
TNIP1-201ENST00000315050 PBRM1Q86U86 1689 aa17.5■□□□□ 0.39
TNIP1-201ENST00000315050 PRKRIP1Q9H875 184 aaPredicted RBP17.5■□□□□ 0.39
TNIP1-201ENST00000315050 MRS2Q9HD23 443 aa17.5■□□□□ 0.39
TNIP1-201ENST00000315050 CCDC7Q96M83 1385 aa17.5■□□□□ 0.39
TNIP1-201ENST00000315050 CNGB1Q14028 1251 aaPredicted RBP17.5■□□□□ 0.39
TNIP1-201ENST00000315050 DAPK1P53355 1430 aa17.49■□□□□ 0.39
TNIP1-201ENST00000315050 ADAMTS12P58397 1594 aa17.48■□□□□ 0.39
TNIP1-201ENST00000315050 ANKRD30BQ9BXX2 1392 aa17.48■□□□□ 0.39
TNIP1-201ENST00000315050 NCOA1Q15788 1441 aa17.47■□□□□ 0.39
TNIP1-201ENST00000315050 ABCC5O15440 1437 aa17.46■□□□□ 0.39
TNIP1-201ENST00000315050 RPRD2Q5VT52 1461 aaKnown RBP17.45■□□□□ 0.38
TNIP1-201ENST00000315050 POLR3GLQ9BT43 218 aa17.44■□□□□ 0.38
TNIP1-201ENST00000315050 CDK11AQ9UQ88 783 aaPredicted RBP17.44■□□□□ 0.38
TNIP1-201ENST00000315050 KIF7Q2M1P5 1343 aa17.44■□□□□ 0.38
TNIP1-201ENST00000315050 ZNF326Q5BKZ1 582 aaKnown RBP17.44■□□□□ 0.38
TNIP1-201ENST00000315050 ROCK1Q13464 1354 aa17.43■□□□□ 0.38
TNIP1-201ENST00000315050 ZNF608Q9ULD9 1512 aaPredicted RBP17.43■□□□□ 0.38
TNIP1-201ENST00000315050 ZNF777Q9ULD5 760 aaPredicted RBP17.43■□□□□ 0.38
TNIP1-201ENST00000315050 TEX14Q8IWB6 1497 aa17.42■□□□□ 0.38
TNIP1-201ENST00000315050 NUP153P49790 1475 aaKnown RBP17.4■□□□□ 0.38
TNIP1-201ENST00000315050 CFDP1Q9UEE9 299 aaPredicted RBP17.4■□□□□ 0.38
TNIP1-201ENST00000315050 MRC2Q9UBG0 1479 aa17.39■□□□□ 0.37
TNIP1-201ENST00000315050 DISP1Q96F81 1524 aa17.39■□□□□ 0.37
TNIP1-201ENST00000315050 DNMT1P26358 1616 aaKnown RBP17.38■□□□□ 0.37
TNIP1-201ENST00000315050 PRG4Q92954 1404 aaPredicted RBP17.38■□□□□ 0.37
TNIP1-201ENST00000315050 MSH5O43196 834 aa17.38■□□□□ 0.37
TNIP1-201ENST00000315050 PPP4R2Q9NY27 417 aa17.37■□□□□ 0.37
TNIP1-201ENST00000315050 KIAA0586Q9BVV6 1533 aa17.37■□□□□ 0.37
TNIP1-201ENST00000315050 SPATA31E1Q6ZUB1 1445 aa17.36■□□□□ 0.37
TNIP1-201ENST00000315050 ZBED9Q6R2W3 1325 aa17.36■□□□□ 0.37
TNIP1-201ENST00000315050 KIAA0556O60303 1618 aa17.36■□□□□ 0.37
TNIP1-201ENST00000315050 B4GALNT3Q6L9W6 998 aa17.36■□□□□ 0.37
TNIP1-201ENST00000315050 SENP3-EIF4A1A0A087X0R7 540 aa17.34■□□□□ 0.37
TNIP1-201ENST00000315050 FBLN2P98095 1184 aa17.33■□□□□ 0.36
TNIP1-201ENST00000315050 PKD2Q13563 968 aa17.33■□□□□ 0.36
TNIP1-201ENST00000315050 PZPP20742 1482 aa17.32■□□□□ 0.36
TNIP1-201ENST00000315050 RAPGEF6Q8TEU7 1601 aa17.32■□□□□ 0.36
TNIP1-201ENST00000315050 BCL11AQ9H165 835 aa17.32■□□□□ 0.36
TNIP1-201ENST00000315050 ERICH6BQ5W0A0 696 aa17.32■□□□□ 0.36
TNIP1-201ENST00000315050 CAMSAP2Q08AD1 1489 aa17.31■□□□□ 0.36
TNIP1-201ENST00000315050 IFT140Q96RY7 1462 aa17.31■□□□□ 0.36
TNIP1-201ENST00000315050 TROQ12816 1431 aaPredicted RBP17.3■□□□□ 0.36
TNIP1-201ENST00000315050 PLB1Q6P1J6 1458 aa17.3■□□□□ 0.36
TNIP1-201ENST00000315050 USP47Q96K76 1375 aa17.3■□□□□ 0.36
TNIP1-201ENST00000315050 GRIN2AQ12879 1464 aa17.29■□□□□ 0.36
TNIP1-201ENST00000315050 CHMP7Q8WUX9 453 aaPredicted RBP17.29■□□□□ 0.36
TNIP1-201ENST00000315050 FANCIQ9NVI1 1328 aa17.28■□□□□ 0.36
TNIP1-201ENST00000315050 GPATCH8Q9UKJ3 1502 aaKnown RBP17.27■□□□□ 0.35
TNIP1-201ENST00000315050 KIAA1107Q9UPP5 1409 aa17.27■□□□□ 0.35
TNIP1-201ENST00000315050 ERICH6Q7L0X2 663 aa17.26■□□□□ 0.35
TNIP1-201ENST00000315050 DHX29Q7Z478 1369 aaKnown RBP17.25■□□□□ 0.35
TNIP1-201ENST00000315050 ANKRD30AQ9BXX3 1397 aa17.24■□□□□ 0.35
TNIP1-201ENST00000315050 KIF14Q15058 1648 aa17.24■□□□□ 0.35
TNIP1-201ENST00000315050 KDM2AQ9Y2K7 1162 aa17.23■□□□□ 0.35
TNIP1-201ENST00000315050 ANKRD50Q9ULJ7 1429 aa17.22■□□□□ 0.35
TNIP1-201ENST00000315050 MBD5Q9P267 1494 aa17.22■□□□□ 0.35
TNIP1-201ENST00000315050 NUP155O75694 1391 aa17.22■□□□□ 0.35
TNIP1-201ENST00000315050 CARD11Q9BXL7 1154 aa17.22■□□□□ 0.35
TNIP1-201ENST00000315050 EIF4G3O43432 1585 aaKnown RBP17.21■□□□□ 0.35
TNIP1-201ENST00000315050 BCORL1Q5H9F3 1711 aa17.2■□□□□ 0.34
TNIP1-201ENST00000315050 JPH4Q96JJ6 628 aa17.2■□□□□ 0.34
TNIP1-201ENST00000315050 POLR1AO95602 1720 aaPredicted RBP17.19■□□□□ 0.34
TNIP1-201ENST00000315050 PLEKHD1A6NEE1 506 aa17.19■□□□□ 0.34
TNIP1-201ENST00000315050 TMC1Q8TDI8 760 aa17.19■□□□□ 0.34
TNIP1-201ENST00000315050 NUDCQ9Y266 331 aa17.18■□□□□ 0.34
TNIP1-201ENST00000315050 ITSN2Q9NZM3 1697 aa17.18■□□□□ 0.34
TNIP1-201ENST00000315050 ADGRL2O95490 1459 aa17.18■□□□□ 0.34
TNIP1-201ENST00000315050 ADGBQ8N7X0 1667 aa17.17■□□□□ 0.34
TNIP1-201ENST00000315050 ST20-MTHFSA0A0A6YYL1 179 aa17.17■□□□□ 0.34
TNIP1-201ENST00000315050 SMG6Q86US8 1419 aaKnown RBP17.16■□□□□ 0.34
TNIP1-201ENST00000315050 TSPY4P0CV99 314 aa17.16■□□□□ 0.34
TNIP1-201ENST00000315050 TSPY10P0CW01 314 aa17.16■□□□□ 0.34
TNIP1-201ENST00000315050 CEP170Q5SW79 1584 aa17.16■□□□□ 0.34
TNIP1-201ENST00000315050 DCAF11Q8TEB1 546 aa17.16■□□□□ 0.34
TNIP1-201ENST00000315050 CARMIL2Q6F5E8 1435 aa17.16■□□□□ 0.34
TNIP1-201ENST00000315050 PNISRQ8TF01 805 aaKnown RBP17.15■□□□□ 0.34
TNIP1-201ENST00000315050 KDM5CP41229 1560 aa17.14■□□□□ 0.33
TNIP1-201ENST00000315050 HNRNPMP52272 730 aaKnown RBP eCLIP17.14■□□□□ 0.331e-6■■■■□ 22.9
TNIP1-201ENST00000315050 C9orf84Q5VXU9 1444 aa17.14■□□□□ 0.33
TNIP1-201ENST00000315050 CCDC136Q96JN2 1154 aa17.13■□□□□ 0.33
TNIP1-201ENST00000315050 ARID4BQ4LE39 1312 aaPredicted RBP17.13■□□□□ 0.33
TNIP1-201ENST00000315050 SYNJ2O15056 1496 aa17.12■□□□□ 0.33
TNIP1-201ENST00000315050 ERCC6Q03468 1493 aa17.12■□□□□ 0.33
TNIP1-201ENST00000315050 MAGI1Q96QZ7 1491 aaPredicted RBP17.12■□□□□ 0.33
TNIP1-201ENST00000315050 CROCC2H7BZ55 1655 aa17.11■□□□□ 0.33
TNIP1-201ENST00000315050 RALGAPBQ86X10 1494 aa17.1■□□□□ 0.33
TNIP1-201ENST00000315050 ROCK2O75116 1388 aaKnown RBP17.1■□□□□ 0.33
TNIP1-201ENST00000315050 SALL2Q9Y467 1007 aaPredicted RBP17.1■□□□□ 0.33
TNIP1-201ENST00000315050 ADCY10Q96PN6 1610 aa17.09■□□□□ 0.33
TNIP1-201ENST00000315050 UHRF1BP1Q6BDS2 1440 aa17.09■□□□□ 0.33
TNIP1-201ENST00000315050 KIF15Q9NS87 1388 aa17.09■□□□□ 0.33
TNIP1-201ENST00000315050 ATP10BO94823 1461 aa17.07■□□□□ 0.32
TNIP1-201ENST00000315050 RGL3Q3MIN7 710 aa17.07■□□□□ 0.32
TNIP1-201ENST00000315050 RNF123Q5XPI4 1314 aa17.06■□□□□ 0.32
TNIP1-201ENST00000315050 CDC42BPAQ5VT25 1732 aa17.05■□□□□ 0.32
TNIP1-201ENST00000315050 ABCC10Q5T3U5 1492 aa17.05■□□□□ 0.32
TNIP1-201ENST00000315050 MYBBP1AQ9BQG0 1328 aaKnown RBP17.05■□□□□ 0.32
TNIP1-201ENST00000315050 NUP160Q12769 1436 aa17.04■□□□□ 0.32
TNIP1-201ENST00000315050 SHANK2Q9UPX8 1470 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms