RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 EFCAB5A4FU69 1503 aa18.41■□□□□ 0.54
DDX54-202ENST00000314045 FYCO1Q9BQS8 1478 aa18.4■□□□□ 0.54
DDX54-202ENST00000314045 HSPA5P11021 654 aaKnown RBP18.4■□□□□ 0.54
DDX54-202ENST00000314045 KNSTRNQ9Y448 316 aa18.4■□□□□ 0.54
DDX54-202ENST00000314045 FKBP8Q14318 412 aa18.39■□□□□ 0.53
DDX54-202ENST00000314045 NCOA2Q15596 1464 aa18.38■□□□□ 0.53
DDX54-202ENST00000314045 POGKQ9P215 609 aa18.38■□□□□ 0.53
DDX54-202ENST00000314045 PRDM2Q13029 1718 aa18.38■□□□□ 0.53
DDX54-202ENST00000314045 KIAA0586Q9BVV6 1533 aa18.36■□□□□ 0.53
DDX54-202ENST00000314045 TMF1P82094 1093 aa18.34■□□□□ 0.53
DDX54-202ENST00000314045 BIVM-ERCC5R4GMW8 1640 aa18.33■□□□□ 0.53
DDX54-202ENST00000314045 WASHC2CQ9Y4E1 1318 aa18.33■□□□□ 0.52
DDX54-202ENST00000314045 C14orf37Q86TY3 774 aa18.33■□□□□ 0.52
DDX54-202ENST00000314045 ZNF608Q9ULD9 1512 aaPredicted RBP18.32■□□□□ 0.52
DDX54-202ENST00000314045 SYNJ2O15056 1496 aa18.31■□□□□ 0.52
DDX54-202ENST00000314045 HDGFP51858 240 aaKnown RBP18.29■□□□□ 0.52
DDX54-202ENST00000314045 ZBTB47Q9UFB7 747 aaPredicted RBP18.28■□□□□ 0.52
DDX54-202ENST00000314045 RRBP1Q9P2E9 1410 aaKnown RBP18.28■□□□□ 0.52
DDX54-202ENST00000314045 SENP3-EIF4A1A0A087X0R7 540 aa18.28■□□□□ 0.52
DDX54-202ENST00000314045 FAM69CQ0P6D2 419 aa18.25■□□□□ 0.51
DDX54-202ENST00000314045 SAFB2Q14151 953 aaKnown RBP eCLIP18.25■□□□□ 0.51
DDX54-202ENST00000314045 ROCK2O75116 1388 aaKnown RBP18.25■□□□□ 0.51
DDX54-202ENST00000314045 CUL7Q14999 1698 aa18.25■□□□□ 0.51
DDX54-202ENST00000314045 BCL11AQ9H165 835 aa18.25■□□□□ 0.51
DDX54-202ENST00000314045 KIF15Q9NS87 1388 aa18.25■□□□□ 0.51
DDX54-202ENST00000314045 CC2D1BQ5T0F9 858 aaKnown RBP18.24■□□□□ 0.51
DDX54-202ENST00000314045 GRIN2AQ12879 1464 aa18.24■□□□□ 0.51
DDX54-202ENST00000314045 IQGAP2Q13576 1575 aa18.24■□□□□ 0.51
DDX54-202ENST00000314045 TROQ12816 1431 aaPredicted RBP18.24■□□□□ 0.51
DDX54-202ENST00000314045 MAGI1Q96QZ7 1491 aaPredicted RBP18.24■□□□□ 0.51
DDX54-202ENST00000314045 STK26Q9P289 416 aa18.23■□□□□ 0.51
DDX54-202ENST00000314045 PLEKHG5O94827 1062 aa18.23■□□□□ 0.51
DDX54-202ENST00000314045 AFAP1Q8N556 730 aa18.23■□□□□ 0.51
DDX54-202ENST00000314045 CFAP53Q96M91 514 aa18.23■□□□□ 0.51
DDX54-202ENST00000314045 TIAM1Q13009 1591 aa18.22■□□□□ 0.51
DDX54-202ENST00000314045 CCDC144AA2RUR9 1427 aa18.21■□□□□ 0.51
DDX54-202ENST00000314045 PPM1GO15355 546 aaPredicted RBP18.2■□□□□ 0.5
DDX54-202ENST00000314045 ANKRD50Q9ULJ7 1429 aa18.19■□□□□ 0.5
DDX54-202ENST00000314045 TNNT2P45379 298 aaPredicted RBP18.19■□□□□ 0.5
DDX54-202ENST00000314045 SRPK2P78362 688 aaKnown RBP18.19■□□□□ 0.5
DDX54-202ENST00000314045 UACAQ9BZF9 1416 aa18.19■□□□□ 0.5
DDX54-202ENST00000314045 EHBP1L1Q8N3D4 1523 aa18.17■□□□□ 0.5
DDX54-202ENST00000314045 EPRSP07814 1512 aaKnown RBP18.17■□□□□ 0.5
DDX54-202ENST00000314045 IRX6P78412 446 aaPredicted RBP18.17■□□□□ 0.5
DDX54-202ENST00000314045 MIA2Q96PC5 1412 aa18.16■□□□□ 0.5
DDX54-202ENST00000314045 NUTM2DQ5VT03 806 aaPredicted RBP18.16■□□□□ 0.5
DDX54-202ENST00000314045 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.16■□□□□ 0.5
DDX54-202ENST00000314045 ZBTB7CA1YPR0 619 aa18.15■□□□□ 0.5
DDX54-202ENST00000314045 CDK13Q14004 1512 aaKnown RBP18.15■□□□□ 0.5
DDX54-202ENST00000314045 HECW1Q76N89 1606 aa18.15■□□□□ 0.5
DDX54-202ENST00000314045 CCER2I3L3R5 266 aa18.14■□□□□ 0.49
DDX54-202ENST00000314045 ARHGAP5Q13017 1502 aa18.14■□□□□ 0.49
DDX54-202ENST00000314045 PLB1Q6P1J6 1458 aa18.13■□□□□ 0.49
DDX54-202ENST00000314045 CCDC136Q96JN2 1154 aa18.13■□□□□ 0.49
DDX54-202ENST00000314045 ST20-MTHFSA0A0A6YYL1 179 aa18.11■□□□□ 0.49
DDX54-202ENST00000314045 PCF11O94913 1555 aaKnown RBP18.1■□□□□ 0.49
DDX54-202ENST00000314045 NEUROD2Q15784 382 aa18.09■□□□□ 0.49
DDX54-202ENST00000314045 NUDCQ9Y266 331 aa18.09■□□□□ 0.49
DDX54-202ENST00000314045 LMOD2Q6P5Q4 547 aa18.07■□□□□ 0.48
DDX54-202ENST00000314045 MORC1Q86VD1 984 aa18.07■□□□□ 0.48
DDX54-202ENST00000314045 TRAK1Q9UPV9 953 aa18.06■□□□□ 0.48
DDX54-202ENST00000314045 SUPT16HQ9Y5B9 1047 aaKnown RBP18.05■□□□□ 0.48
DDX54-202ENST00000314045 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.05■□□□□ 0.48
DDX54-202ENST00000314045 C9orf84Q5VXU9 1444 aa18.04■□□□□ 0.48
DDX54-202ENST00000314045 HFM1A2PYH4 1435 aa18.04■□□□□ 0.48
DDX54-202ENST00000314045 EIF3AQ14152 1382 aaKnown RBP18.04■□□□□ 0.48
DDX54-202ENST00000314045 KTN1Q86UP2 1357 aaKnown RBP18.04■□□□□ 0.48
DDX54-202ENST00000314045 U2SURPO15042 1029 aaKnown RBP18.03■□□□□ 0.48
DDX54-202ENST00000314045 VGFO15240 615 aaPredicted RBP18.03■□□□□ 0.48
DDX54-202ENST00000314045 MAP3K1Q13233 1512 aa18.03■□□□□ 0.48
DDX54-202ENST00000314045 MAPK8IP3Q9UPT6 1336 aa18.02■□□□□ 0.47
DDX54-202ENST00000314045 SUPT6HQ7KZ85 1726 aaKnown RBP18.02■□□□□ 0.47
DDX54-202ENST00000314045 EID1Q9Y6B2 187 aa18.02■□□□□ 0.47
DDX54-202ENST00000314045 HDGFL2Q7Z4V5 671 aaPredicted RBP18■□□□□ 0.47
DDX54-202ENST00000314045 PLEKHH2Q8IVE3 1493 aa18■□□□□ 0.47
DDX54-202ENST00000314045 RALBP1Q15311 655 aa18■□□□□ 0.47
DDX54-202ENST00000314045 USP47Q96K76 1375 aa18■□□□□ 0.47
DDX54-202ENST00000314045 DAPK1P53355 1430 aa18■□□□□ 0.47
DDX54-202ENST00000314045 SCAPERQ9BY12 1400 aa18■□□□□ 0.47
DDX54-202ENST00000314045 HAP1P54257 671 aaPredicted RBP17.99■□□□□ 0.47
DDX54-202ENST00000314045 SOX12O15370 315 aa17.98■□□□□ 0.47
DDX54-202ENST00000314045 ARHGEF11O15085 1522 aa17.98■□□□□ 0.47
DDX54-202ENST00000314045 RAPGEF3O95398 923 aa17.97■□□□□ 0.47
DDX54-202ENST00000314045 NAIPQ13075 1403 aa17.96■□□□□ 0.47
DDX54-202ENST00000314045 KIF21AQ7Z4S6 1674 aa17.94■□□□□ 0.46
DDX54-202ENST00000314045 RTL5Q5HYW3 569 aaPredicted RBP17.94■□□□□ 0.46
DDX54-202ENST00000314045 NPM2Q86SE8 214 aaKnown RBP17.94■□□□□ 0.46
DDX54-202ENST00000314045 STAC3Q96MF2 364 aa17.93■□□□□ 0.46
DDX54-202ENST00000314045 ANP32AP39687 249 aaKnown RBP17.93■□□□□ 0.46
DDX54-202ENST00000314045 TERF2IPQ9NYB0 399 aa17.92■□□□□ 0.46
DDX54-202ENST00000314045 PANK3Q9H999 370 aa17.91■□□□□ 0.46
DDX54-202ENST00000314045 LAS1LQ9Y4W2 734 aaKnown RBP17.91■□□□□ 0.46
DDX54-202ENST00000314045 NLRP13Q86W25 1043 aa17.9■□□□□ 0.46
DDX54-202ENST00000314045 ROCK1Q13464 1354 aa17.9■□□□□ 0.46
DDX54-202ENST00000314045 KIAA1107Q9UPP5 1409 aa17.89■□□□□ 0.45
DDX54-202ENST00000314045 A0A0G2JS52 829 aa17.89■□□□□ 0.45
DDX54-202ENST00000314045 PNNQ9H307 717 aaKnown RBP17.89■□□□□ 0.45
DDX54-202ENST00000314045 ABCC5O15440 1437 aa17.88■□□□□ 0.45
DDX54-202ENST00000314045 NUTM2FA1L443 756 aa17.87■□□□□ 0.45
DDX54-202ENST00000314045 PRKRIP1Q9H875 184 aaPredicted RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms