RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 ARHGAP35Q9NRY4 1499 aa13.35□□□□□ -0.27
TPM3-203ENST00000312970 RIMS1Q86UR5 1692 aaKnown RBP13.34□□□□□ -0.27
TPM3-203ENST00000312970 CERKQ8TCT0 537 aa13.33□□□□□ -0.28
TPM3-203ENST00000312970 CDK13Q14004 1512 aaKnown RBP13.33□□□□□ -0.28
TPM3-203ENST00000312970 ZMYM4Q5VZL5 1548 aa13.33□□□□□ -0.28
TPM3-203ENST00000312970 PLCH2O75038 1416 aa13.3□□□□□ -0.28
TPM3-203ENST00000312970 EFCAB2Q5VUJ9 269 aa13.3□□□□□ -0.28
TPM3-203ENST00000312970 SIGLEC1Q9BZZ2 1709 aa13.3□□□□□ -0.28
TPM3-203ENST00000312970 ZFYVE16Q7Z3T8 1539 aa13.29□□□□□ -0.28
TPM3-203ENST00000312970 HECW1Q76N89 1606 aa13.29□□□□□ -0.28
TPM3-203ENST00000312970 SOCS7O14512 581 aa13.29□□□□□ -0.28
TPM3-203ENST00000312970 MYO5CQ9NQX4 1742 aa13.27□□□□□ -0.28
TPM3-203ENST00000312970 POGZQ7Z3K3 1410 aa13.27□□□□□ -0.29
TPM3-203ENST00000312970 SCAPERQ9BY12 1400 aa13.27□□□□□ -0.29
TPM3-203ENST00000312970 MAGI2Q86UL8 1455 aa13.27□□□□□ -0.29
TPM3-203ENST00000312970 FER1L4A9Z1Z3 1794 aa13.27□□□□□ -0.29
TPM3-203ENST00000312970 DISP3Q9P2K9 1392 aa13.26□□□□□ -0.29
TPM3-203ENST00000312970 YEATS2Q9ULM3 1422 aa13.26□□□□□ -0.29
TPM3-203ENST00000312970 CLIP1P30622 1438 aa13.24□□□□□ -0.29
TPM3-203ENST00000312970 TROQ12816 1431 aaPredicted RBP13.24□□□□□ -0.29
TPM3-203ENST00000312970 KIF14Q15058 1648 aa13.22□□□□□ -0.29
TPM3-203ENST00000312970 CASKIN1Q8WXD9 1431 aa13.22□□□□□ -0.29
TPM3-203ENST00000312970 ADRA2BP18089 450 aa13.21□□□□□ -0.29
TPM3-203ENST00000312970 LRRIQ1Q96JM4 1722 aa13.21□□□□□ -0.3
TPM3-203ENST00000312970 MLECQ14165 292 aa13.2□□□□□ -0.3
TPM3-203ENST00000312970 AFAP1Q8N556 730 aa13.2□□□□□ -0.3
TPM3-203ENST00000312970 ATP10AO60312 1499 aa13.19□□□□□ -0.3
TPM3-203ENST00000312970 ARHGAP5Q13017 1502 aa13.18□□□□□ -0.3
TPM3-203ENST00000312970 ARHGEF12Q9NZN5 1544 aa13.18□□□□□ -0.3
TPM3-203ENST00000312970 CCDC18Q5T9S5 1454 aa13.18□□□□□ -0.3
TPM3-203ENST00000312970 MYT1LQ9UL68 1186 aa13.18□□□□□ -0.3
TPM3-203ENST00000312970 C9orf84Q5VXU9 1444 aa13.18□□□□□ -0.3
TPM3-203ENST00000312970 PREX1Q8TCU6 1659 aa13.17□□□□□ -0.3
TPM3-203ENST00000312970 ZNF518AQ6AHZ1 1483 aa13.16□□□□□ -0.3
TPM3-203ENST00000312970 KDM5CP41229 1560 aa13.16□□□□□ -0.3
TPM3-203ENST00000312970 CDC42BPBQ9Y5S2 1711 aa13.16□□□□□ -0.3
TPM3-203ENST00000312970 CEBPAP49715 358 aaPredicted RBP13.15□□□□□ -0.3
TPM3-203ENST00000312970 STRCQ7RTU9 1775 aa13.15□□□□□ -0.31
TPM3-203ENST00000312970 FOXD1Q16676 465 aa13.14□□□□□ -0.31
TPM3-203ENST00000312970 SLC4A1APQ9BWU0 796 aaKnown RBP13.14□□□□□ -0.31
TPM3-203ENST00000312970 FYCO1Q9BQS8 1478 aa13.14□□□□□ -0.31
TPM3-203ENST00000312970 PREX2Q70Z35 1606 aa13.13□□□□□ -0.31
TPM3-203ENST00000312970 DIP2CQ9Y2E4 1556 aa13.12□□□□□ -0.31
TPM3-203ENST00000312970 REREQ9P2R6 1566 aa13.11□□□□□ -0.31
TPM3-203ENST00000312970 ABCA6Q8N139 1617 aa13.11□□□□□ -0.31
TPM3-203ENST00000312970 ZNF777Q9ULD5 760 aaPredicted RBP13.11□□□□□ -0.31
TPM3-203ENST00000312970 ITSN2Q9NZM3 1697 aa13.11□□□□□ -0.31
TPM3-203ENST00000312970 MLH3Q9UHC1 1453 aa13.1□□□□□ -0.31
TPM3-203ENST00000312970 DMRT2Q9Y5R5 561 aa13.1□□□□□ -0.31
TPM3-203ENST00000312970 TRAPPC8Q9Y2L5 1435 aa13.1□□□□□ -0.31
TPM3-203ENST00000312970 ABCC1P33527 1531 aa13.09□□□□□ -0.31
TPM3-203ENST00000312970 SETD1BQ9UPS6 1966 aaKnown RBP13.09□□□□□ -0.31
TPM3-203ENST00000312970 CDC42BPAQ5VT25 1732 aa13.09□□□□□ -0.31
TPM3-203ENST00000312970 C3P01024 1663 aa13.08□□□□□ -0.31
TPM3-203ENST00000312970 SPATA31D1Q6ZQQ2 1576 aa13.08□□□□□ -0.32
TPM3-203ENST00000312970 HNRNPMP52272 730 aaKnown RBP eCLIP13.07□□□□□ -0.327e-7■■■□□ 16.5
TPM3-203ENST00000312970 CFDP1Q9UEE9 299 aaPredicted RBP13.07□□□□□ -0.32
TPM3-203ENST00000312970 UHRF1BP1Q6BDS2 1440 aa13.06□□□□□ -0.32
TPM3-203ENST00000312970 ESF1Q9H501 851 aaKnown RBP13.06□□□□□ -0.32
TPM3-203ENST00000312970 AGLP35573 1532 aa13.06□□□□□ -0.32
TPM3-203ENST00000312970 GPATCH8Q9UKJ3 1502 aaKnown RBP13.06□□□□□ -0.32
TPM3-203ENST00000312970 KIDINS220Q9ULH0 1771 aa13.06□□□□□ -0.32
TPM3-203ENST00000312970 MTUS2Q5JR59 1369 aa13.06□□□□□ -0.32
TPM3-203ENST00000312970 CCNB3Q8WWL7 1395 aa13.06□□□□□ -0.32
TPM3-203ENST00000312970 SPAG9O60271 1321 aaKnown RBP13.04□□□□□ -0.32
TPM3-203ENST00000312970 KIAA1107Q9UPP5 1409 aa13.03□□□□□ -0.32
TPM3-203ENST00000312970 LTBP4Q8N2S1 1624 aa13.02□□□□□ -0.33
TPM3-203ENST00000312970 PTPRTO14522 1441 aa13.01□□□□□ -0.33
TPM3-203ENST00000312970 CEP162Q5TB80 1403 aa13.01□□□□□ -0.33
TPM3-203ENST00000312970 PLEKHH2Q8IVE3 1493 aa13.01□□□□□ -0.33
TPM3-203ENST00000312970 SAMD9LQ8IVG5 1584 aa13.01□□□□□ -0.33
TPM3-203ENST00000312970 MROH2AA6NES4 1674 aa13□□□□□ -0.33
TPM3-203ENST00000312970 SYCP2Q9BX26 1530 aa12.99□□□□□ -0.33
TPM3-203ENST00000312970 SUPT6HQ7KZ85 1726 aaKnown RBP12.99□□□□□ -0.33
TPM3-203ENST00000312970 CNTLNQ9NXG0 1405 aa12.98□□□□□ -0.33
TPM3-203ENST00000312970 ZNF644Q9H582 1327 aaPredicted RBP12.98□□□□□ -0.33
TPM3-203ENST00000312970 LOC105371045A0A1W2PR82 267 aa12.97□□□□□ -0.33
TPM3-203ENST00000312970 INO80Q9ULG1 1556 aaPredicted RBP12.95□□□□□ -0.34
TPM3-203ENST00000312970 ATP7AQ04656 1500 aa12.95□□□□□ -0.34
TPM3-203ENST00000312970 EHBP1L1Q8N3D4 1523 aa12.95□□□□□ -0.34
TPM3-203ENST00000312970 ZMYM3Q14202 1370 aa12.94□□□□□ -0.34
TPM3-203ENST00000312970 CLTCQ00610 1675 aaKnown RBP12.94□□□□□ -0.34
TPM3-203ENST00000312970 A2MP01023 1474 aa12.94□□□□□ -0.34
TPM3-203ENST00000312970 RSPH4AQ5TD94 716 aa12.94□□□□□ -0.34
TPM3-203ENST00000312970 GGT6Q6P531 493 aa12.94□□□□□ -0.34
TPM3-203ENST00000312970 PPP6R1Q9UPN7 881 aa12.94□□□□□ -0.34
TPM3-203ENST00000312970 NPATQ14207 1427 aa12.94□□□□□ -0.34
TPM3-203ENST00000312970 PLXNC1O60486 1568 aa12.94□□□□□ -0.34
TPM3-203ENST00000312970 IQSEC2Q5JU85 1478 aa12.93□□□□□ -0.34
TPM3-203ENST00000312970 NCOA1Q15788 1441 aa12.93□□□□□ -0.34
TPM3-203ENST00000312970 TIAM1Q13009 1591 aa12.93□□□□□ -0.34
TPM3-203ENST00000312970 MBD5Q9P267 1494 aa12.92□□□□□ -0.34
TPM3-203ENST00000312970 CAMSAP1Q5T5Y3 1602 aa12.92□□□□□ -0.34
TPM3-203ENST00000312970 ZNF142P52746 1687 aaPredicted RBP12.92□□□□□ -0.34
TPM3-203ENST00000312970 ADGBQ8N7X0 1667 aa12.92□□□□□ -0.34
TPM3-203ENST00000312970 MYO3AQ8NEV4 1616 aa12.91□□□□□ -0.34
TPM3-203ENST00000312970 RTEL1-TNFRSF6BF6WH68 1400 aa12.91□□□□□ -0.34
TPM3-203ENST00000312970 UBAP1LF5GYI3 381 aa12.91□□□□□ -0.34
TPM3-203ENST00000312970 NCKAP5LQ9HCH0 1330 aa12.9□□□□□ -0.34
TPM3-203ENST00000312970 NCOA2Q15596 1464 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms