RNA–Protein interactions for RNA: ENST00000311895.7

ERCC4-201, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC4, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-201ENST00000311895 CHMP4BQ9H444 224 aaKnown RBP10.84□□□□□ -0.67
ERCC4-201ENST00000311895 STK26Q9P289 416 aa10.84□□□□□ -0.67
ERCC4-201ENST00000311895 CCER2I3L3R5 266 aa10.84□□□□□ -0.67
ERCC4-201ENST00000311895 RCAN3Q9UKA8 241 aa10.83□□□□□ -0.68
ERCC4-201ENST00000311895 FOXD4L1Q9NU39 408 aa10.83□□□□□ -0.68
ERCC4-201ENST00000311895 NRDCO43847 1150 aa10.82□□□□□ -0.68
ERCC4-201ENST00000311895 MCCP23508 829 aa10.82□□□□□ -0.68
ERCC4-201ENST00000311895 MLECQ14165 292 aa10.82□□□□□ -0.68
ERCC4-201ENST00000311895 ITPRIPQ8IWB1 547 aa10.82□□□□□ -0.68
ERCC4-201ENST00000311895 RB1CC1Q8TDY2 1594 aa10.82□□□□□ -0.68
ERCC4-201ENST00000311895 PNNQ9H307 717 aaKnown RBP10.81□□□□□ -0.68
ERCC4-201ENST00000311895 CLSTN1O94985 981 aa10.81□□□□□ -0.68
ERCC4-201ENST00000311895 MFAP1P55081 439 aaKnown RBP10.81□□□□□ -0.68
ERCC4-201ENST00000311895 KANK4Q5T7N3 995 aaPredicted RBP10.8□□□□□ -0.68
ERCC4-201ENST00000311895 EIF4G1Q04637 1599 aaKnown RBP10.8□□□□□ -0.68
ERCC4-201ENST00000311895 ISY1Q9ULR0 285 aaKnown RBP10.79□□□□□ -0.68
ERCC4-201ENST00000311895 SOGA1O94964 1423 aa10.79□□□□□ -0.68
ERCC4-201ENST00000311895 GNL2Q13823 731 aaKnown RBP10.79□□□□□ -0.68
ERCC4-201ENST00000311895 KTN1Q86UP2 1357 aaKnown RBP10.79□□□□□ -0.68
ERCC4-201ENST00000311895 NOL8Q76FK4 1167 aaKnown RBP10.79□□□□□ -0.68
ERCC4-201ENST00000311895 PKD2Q13563 968 aa10.78□□□□□ -0.68
ERCC4-201ENST00000311895 CCDC146Q8IYE0 955 aa10.78□□□□□ -0.68
ERCC4-201ENST00000311895 CECR2Q9BXF3 1484 aa10.78□□□□□ -0.68
ERCC4-201ENST00000311895 U2AF1L5P0DN76 240 aaPredicted RBP10.78□□□□□ -0.68
ERCC4-201ENST00000311895 U2AF1Q01081 240 aaKnown RBP eCLIP10.78□□□□□ -0.68
ERCC4-201ENST00000311895 SETD5Q9C0A6 1442 aa10.78□□□□□ -0.68
ERCC4-201ENST00000311895 RTF1Q92541 710 aaKnown RBP10.78□□□□□ -0.68
ERCC4-201ENST00000311895 CLUAP1Q96AJ1 413 aa10.77□□□□□ -0.68
ERCC4-201ENST00000311895 GBP4Q96PP9 640 aa10.77□□□□□ -0.68
ERCC4-201ENST00000311895 BAZ1BQ9UIG0 1483 aaKnown RBP10.77□□□□□ -0.69
ERCC4-201ENST00000311895 KIAA1211Q6ZU35 1233 aa10.77□□□□□ -0.69
ERCC4-201ENST00000311895 FOXD4L5Q5VV16 416 aaPredicted RBP10.76□□□□□ -0.69
ERCC4-201ENST00000311895 FOXD4L4Q8WXT5 416 aaPredicted RBP10.76□□□□□ -0.69
ERCC4-201ENST00000311895 ZNF330Q9Y3S2 320 aaPredicted RBP10.76□□□□□ -0.69
ERCC4-201ENST00000311895 IPO9Q96P70 1041 aaKnown RBP10.76□□□□□ -0.69
ERCC4-201ENST00000311895 TCERG1O14776 1098 aaKnown RBP10.75□□□□□ -0.69
ERCC4-201ENST00000311895 SLC4A3P48751 1232 aa10.75□□□□□ -0.69
ERCC4-201ENST00000311895 ROCK2O75116 1388 aaKnown RBP10.75□□□□□ -0.69
ERCC4-201ENST00000311895 RWDD1Q9H446 243 aaPredicted RBP10.75□□□□□ -0.69
ERCC4-201ENST00000311895 KIAA2012Q0VF49 1180 aa10.74□□□□□ -0.69
ERCC4-201ENST00000311895 GGT6Q6P531 493 aa10.74□□□□□ -0.69
ERCC4-201ENST00000311895 GOLGA6L3A6NEY3 463 aa10.74□□□□□ -0.69
ERCC4-201ENST00000311895 IPO8O15397 1037 aaKnown RBP10.74□□□□□ -0.69
ERCC4-201ENST00000311895 PAK3O75914 559 aaPredicted RBP10.74□□□□□ -0.69
ERCC4-201ENST00000311895 TRIM6-TRIM34B2RNG4 842 aa10.73□□□□□ -0.69
ERCC4-201ENST00000311895 RAB3GAP2Q9H2M9 1393 aa10.73□□□□□ -0.69
ERCC4-201ENST00000311895 SMC4Q9NTJ3 1288 aa10.72□□□□□ -0.69
ERCC4-201ENST00000311895 HSP90B1P14625 803 aaKnown RBP10.72□□□□□ -0.69
ERCC4-201ENST00000311895 MPHOSPH9Q99550 1183 aa10.72□□□□□ -0.69
ERCC4-201ENST00000311895 KANK1Q14678 1352 aa10.72□□□□□ -0.69
ERCC4-201ENST00000311895 NUTM2DQ5VT03 806 aaPredicted RBP10.71□□□□□ -0.69
ERCC4-201ENST00000311895 FHAD1B1AJZ9 1412 aa10.71□□□□□ -0.7
ERCC4-201ENST00000311895 SLC4A10Q6U841 1118 aa10.71□□□□□ -0.7
ERCC4-201ENST00000311895 ARHGAP35Q9NRY4 1499 aa10.71□□□□□ -0.7
ERCC4-201ENST00000311895 PLIN1O60240 522 aa10.7□□□□□ -0.7
ERCC4-201ENST00000311895 PDE4CQ08493 712 aa10.7□□□□□ -0.7
ERCC4-201ENST00000311895 CARMIL1Q5VZK9 1371 aa10.7□□□□□ -0.7
ERCC4-201ENST00000311895 HDGFL2Q7Z4V5 671 aaPredicted RBP10.7□□□□□ -0.7
ERCC4-201ENST00000311895 CHMP3Q9Y3E7 222 aa10.69□□□□□ -0.7
ERCC4-201ENST00000311895 CREBRFQ8IUR6 639 aa10.69□□□□□ -0.7
ERCC4-201ENST00000311895 TIMELESSQ9UNS1 1208 aa10.69□□□□□ -0.7
ERCC4-201ENST00000311895 FOXD4L6Q3SYB3 417 aaPredicted RBP10.69□□□□□ -0.7
ERCC4-201ENST00000311895 FOXD4L3Q6VB84 417 aaPredicted RBP10.69□□□□□ -0.7
ERCC4-201ENST00000311895 PMFBP1Q8TBY8 1022 aa10.69□□□□□ -0.7
ERCC4-201ENST00000311895 RALBP1Q15311 655 aa10.69□□□□□ -0.7
ERCC4-201ENST00000311895 RRP7AQ9Y3A4 280 aaKnown RBP10.69□□□□□ -0.7
ERCC4-201ENST00000311895 CUX2O14529 1486 aa10.68□□□□□ -0.7
ERCC4-201ENST00000311895 CALD1Q05682 793 aaKnown RBP10.68□□□□□ -0.7
ERCC4-201ENST00000311895 ABCC8Q09428 1581 aa10.68□□□□□ -0.7
ERCC4-201ENST00000311895 NOC3LQ8WTT2 800 aaKnown RBP10.67□□□□□ -0.7
ERCC4-201ENST00000311895 CFAP44Q96MT7 982 aa10.67□□□□□ -0.7
ERCC4-201ENST00000311895 BCL2L13Q9BXK5 485 aa10.67□□□□□ -0.7
ERCC4-201ENST00000311895 SYAP1Q96A49 352 aaPredicted RBP10.67□□□□□ -0.7
ERCC4-201ENST00000311895 PTMSP20962 102 aa10.66□□□□□ -0.7
ERCC4-201ENST00000311895 L3MBTL2Q969R5 705 aa10.66□□□□□ -0.7
ERCC4-201ENST00000311895 NUP155O75694 1391 aa10.66□□□□□ -0.7
ERCC4-201ENST00000311895 CCDC88BA6NC98 1476 aa10.66□□□□□ -0.7
ERCC4-201ENST00000311895 ANO8Q9HCE9 1232 aaPredicted RBP10.66□□□□□ -0.7
ERCC4-201ENST00000311895 MROH2BQ7Z745 1585 aa10.66□□□□□ -0.7
ERCC4-201ENST00000311895 ERCC6Q03468 1493 aa10.65□□□□□ -0.7
ERCC4-201ENST00000311895 CCDC9Q9Y3X0 531 aaKnown RBP10.65□□□□□ -0.7
ERCC4-201ENST00000311895 VPS8Q8N3P4 1428 aa10.65□□□□□ -0.7
ERCC4-201ENST00000311895 CSB-PGBD3P0DP91 1061 aa10.65□□□□□ -0.7
ERCC4-201ENST00000311895 CENPJQ9HC77 1338 aaPredicted RBP10.65□□□□□ -0.71
ERCC4-201ENST00000311895 TNNT3P45378 269 aaPredicted RBP10.65□□□□□ -0.71
ERCC4-201ENST00000311895 GORABQ5T7V8 394 aa10.65□□□□□ -0.71
ERCC4-201ENST00000311895 NUTM2FA1L443 756 aa10.64□□□□□ -0.71
ERCC4-201ENST00000311895 ELL2O00472 640 aaPredicted RBP10.63□□□□□ -0.71
ERCC4-201ENST00000311895 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.63□□□□□ -0.71
ERCC4-201ENST00000311895 STK31Q9BXU1 1019 aa10.63□□□□□ -0.71
ERCC4-201ENST00000311895 EXOC6Q8TAG9 804 aa10.63□□□□□ -0.71
ERCC4-201ENST00000311895 LTV1Q96GA3 475 aaPredicted RBP10.62□□□□□ -0.71
ERCC4-201ENST00000311895 PDE4AP27815 886 aa10.62□□□□□ -0.71
ERCC4-201ENST00000311895 HTATSF1O43719 755 aaKnown RBP10.62□□□□□ -0.71
ERCC4-201ENST00000311895 TRHP20396 242 aaPredicted RBP10.62□□□□□ -0.71
ERCC4-201ENST00000311895 TPM4P67936 248 aa10.61□□□□□ -0.71
ERCC4-201ENST00000311895 BAZ1AQ9NRL2 1556 aaPredicted RBP10.61□□□□□ -0.71
ERCC4-201ENST00000311895 HDGFP51858 240 aaKnown RBP10.61□□□□□ -0.71
ERCC4-201ENST00000311895 HNRNPMP52272 730 aaKnown RBP eCLIP10.61□□□□□ -0.71
ERCC4-201ENST00000311895 NACADO15069 1562 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 151.8 ms