RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 AKNAQ7Z591 1439 aa35.37■■■■□ 3.25
HOXB3-201ENST00000311626 IFT140Q96RY7 1462 aa35.37■■■■□ 3.25
HOXB3-201ENST00000311626 NBPF8Q3BBV2 869 aa35.36■■■■□ 3.25
HOXB3-201ENST00000311626 KIAA0586Q9BVV6 1533 aa35.35■■■■□ 3.25
HOXB3-201ENST00000311626 KIAA0556O60303 1618 aa35.35■■■■□ 3.25
HOXB3-201ENST00000311626 SLC4A1APQ9BWU0 796 aaKnown RBP35.34■■■■□ 3.25
HOXB3-201ENST00000311626 ZNF777Q9ULD5 760 aaPredicted RBP35.34■■■■□ 3.25
HOXB3-201ENST00000311626 CCDC184Q52MB2 194 aa35.33■■■■□ 3.25
HOXB3-201ENST00000311626 PRG4Q92954 1404 aaPredicted RBP35.31■■■■□ 3.24
HOXB3-201ENST00000311626 ANKRD30BQ9BXX2 1392 aa35.28■■■■□ 3.24
HOXB3-201ENST00000311626 GRIN2AQ12879 1464 aa35.27■■■■□ 3.24
HOXB3-201ENST00000311626 CHMP7Q8WUX9 453 aaPredicted RBP35.26■■■■□ 3.24
HOXB3-201ENST00000311626 CDK11AQ9UQ88 783 aaPredicted RBP35.26■■■■□ 3.23
HOXB3-201ENST00000311626 IRX6P78412 446 aaPredicted RBP35.24■■■■□ 3.23
HOXB3-201ENST00000311626 RAPGEF6Q8TEU7 1601 aa35.24■■■■□ 3.23
HOXB3-201ENST00000311626 CFDP1Q9UEE9 299 aaPredicted RBP35.23■■■■□ 3.23
HOXB3-201ENST00000311626 PLB1Q6P1J6 1458 aa35.21■■■■□ 3.23
HOXB3-201ENST00000311626 ROCK1Q13464 1354 aa35.21■■■■□ 3.23
HOXB3-201ENST00000311626 EIF4G3O43432 1585 aaKnown RBP35.21■■■■□ 3.23
HOXB3-201ENST00000311626 DNMT1P26358 1616 aaKnown RBP35.2■■■■□ 3.23
HOXB3-201ENST00000311626 CNGB1Q14028 1251 aaPredicted RBP35.19■■■■□ 3.22
HOXB3-201ENST00000311626 RPRD2Q5VT52 1461 aaKnown RBP35.16■■■■□ 3.22
HOXB3-201ENST00000311626 CCDC7Q96M83 1385 aa35.15■■■■□ 3.22
HOXB3-201ENST00000311626 CNTLNQ9NXG0 1405 aa35.15■■■■□ 3.22
HOXB3-201ENST00000311626 ZNF326Q5BKZ1 582 aaKnown RBP35.14■■■■□ 3.22
HOXB3-201ENST00000311626 FAM9BQ8IZU0 186 aa35.13■■■■□ 3.21
HOXB3-201ENST00000311626 ERCC6Q03468 1493 aa35.11■■■■□ 3.21
HOXB3-201ENST00000311626 MYT1Q01538 1121 aa35.1■■■■□ 3.21
HOXB3-201ENST00000311626 TROQ12816 1431 aaPredicted RBP35.1■■■■□ 3.21
HOXB3-201ENST00000311626 TEX14Q8IWB6 1497 aa35.1■■■■□ 3.21
HOXB3-201ENST00000311626 CAMSAP2Q08AD1 1489 aa35.1■■■■□ 3.21
HOXB3-201ENST00000311626 NCOA1Q15788 1441 aa35.09■■■■□ 3.21
HOXB3-201ENST00000311626 PRKRIP1Q9H875 184 aaPredicted RBP35.08■■■■□ 3.21
HOXB3-201ENST00000311626 POLR3GLQ9BT43 218 aa35.07■■■■□ 3.2
HOXB3-201ENST00000311626 CEP170Q5SW79 1584 aa35.07■■■■□ 3.2
HOXB3-201ENST00000311626 KIF14Q15058 1648 aa35.06■■■■□ 3.2
HOXB3-201ENST00000311626 JPH4Q96JJ6 628 aa35.06■■■■□ 3.2
HOXB3-201ENST00000311626 KIF7Q2M1P5 1343 aa35.05■■■■□ 3.2
HOXB3-201ENST00000311626 GPATCH8Q9UKJ3 1502 aaKnown RBP35.05■■■■□ 3.2
HOXB3-201ENST00000311626 PZPP20742 1482 aa35.04■■■■□ 3.2
HOXB3-201ENST00000311626 MRS2Q9HD23 443 aa35.03■■■■□ 3.2
HOXB3-201ENST00000311626 PKD2Q13563 968 aa35.02■■■■□ 3.2
HOXB3-201ENST00000311626 SPATA31E1Q6ZUB1 1445 aa34.95■■■■□ 3.18
HOXB3-201ENST00000311626 SYNJ2O15056 1496 aa34.94■■■■□ 3.18
HOXB3-201ENST00000311626 RBM19Q9Y4C8 960 aaKnown RBP34.94■■■■□ 3.18
HOXB3-201ENST00000311626 MAGI1Q96QZ7 1491 aaPredicted RBP34.93■■■■□ 3.18
HOXB3-201ENST00000311626 PLEKHD1A6NEE1 506 aa34.9■■■■□ 3.18
HOXB3-201ENST00000311626 CARMIL2Q6F5E8 1435 aa34.88■■■■□ 3.17
HOXB3-201ENST00000311626 SENP3-EIF4A1A0A087X0R7 540 aa34.88■■■■□ 3.17
HOXB3-201ENST00000311626 KIAA1107Q9UPP5 1409 aa34.87■■■■□ 3.17
HOXB3-201ENST00000311626 ANKRD30AQ9BXX3 1397 aa34.86■■■■□ 3.17
HOXB3-201ENST00000311626 ITSN2Q9NZM3 1697 aa34.84■■■■□ 3.17
HOXB3-201ENST00000311626 ANKRD50Q9ULJ7 1429 aa34.83■■■■□ 3.17
HOXB3-201ENST00000311626 HNRNPMP52272 730 aaKnown RBP eCLIP34.82■■■■□ 3.162e-6■■■■□ 24.7
HOXB3-201ENST00000311626 KDM2AQ9Y2K7 1162 aa34.81■■■■□ 3.16
HOXB3-201ENST00000311626 NUP155O75694 1391 aa34.81■■■■□ 3.16
HOXB3-201ENST00000311626 ADGBQ8N7X0 1667 aa34.8■■■■□ 3.16
HOXB3-201ENST00000311626 USP47Q96K76 1375 aa34.8■■■■□ 3.16
HOXB3-201ENST00000311626 NUP160Q12769 1436 aa34.77■■■■□ 3.16
HOXB3-201ENST00000311626 ATP10BO94823 1461 aa34.77■■■■□ 3.16
HOXB3-201ENST00000311626 ADGRL2O95490 1459 aa34.77■■■■□ 3.16
HOXB3-201ENST00000311626 ADCY10Q96PN6 1610 aa34.75■■■■□ 3.15
HOXB3-201ENST00000311626 ANP32EQ9BTT0 268 aa34.74■■■■□ 3.15
HOXB3-201ENST00000311626 CROCC2H7BZ55 1655 aa34.73■■■■□ 3.15
HOXB3-201ENST00000311626 MBD5Q9P267 1494 aa34.73■■■■□ 3.15
HOXB3-201ENST00000311626 BCORL1Q5H9F3 1711 aa34.72■■■■□ 3.15
HOXB3-201ENST00000311626 C9orf84Q5VXU9 1444 aa34.72■■■■□ 3.15
HOXB3-201ENST00000311626 TSPY4P0CV99 314 aa34.72■■■■□ 3.15
HOXB3-201ENST00000311626 TSPY10P0CW01 314 aa34.72■■■■□ 3.15
HOXB3-201ENST00000311626 CDC42BPAQ5VT25 1732 aa34.69■■■■□ 3.14
HOXB3-201ENST00000311626 DHX29Q7Z478 1369 aaKnown RBP34.68■■■■□ 3.14
HOXB3-201ENST00000311626 ZBED9Q6R2W3 1325 aa34.68■■■■□ 3.14
HOXB3-201ENST00000311626 ABCC10Q5T3U5 1492 aa34.68■■■■□ 3.14
HOXB3-201ENST00000311626 CARD11Q9BXL7 1154 aa34.66■■■■□ 3.14
HOXB3-201ENST00000311626 ABCA8O94911 1581 aa34.65■■■■□ 3.14
HOXB3-201ENST00000311626 DCAF11Q8TEB1 546 aa34.63■■■■□ 3.13
HOXB3-201ENST00000311626 B4GALNT3Q6L9W6 998 aa34.62■■■■□ 3.13
HOXB3-201ENST00000311626 POLR1AO95602 1720 aaPredicted RBP34.62■■■■□ 3.13
HOXB3-201ENST00000311626 KIF15Q9NS87 1388 aa34.61■■■■□ 3.13
HOXB3-201ENST00000311626 ST20-MTHFSA0A0A6YYL1 179 aa34.57■■■■□ 3.13
HOXB3-201ENST00000311626 PPP4R2Q9NY27 417 aa34.57■■■■□ 3.13
HOXB3-201ENST00000311626 KDM5CP41229 1560 aa34.56■■■■□ 3.12
HOXB3-201ENST00000311626 PTPRGP23470 1445 aa34.54■■■■□ 3.12
HOXB3-201ENST00000311626 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.51■■■■□ 3.12
HOXB3-201ENST00000311626 RGL3Q3MIN7 710 aa34.5■■■■□ 3.11
HOXB3-201ENST00000311626 SHANK2Q9UPX8 1470 aa34.49■■■■□ 3.11
HOXB3-201ENST00000311626 MSH5O43196 834 aa34.49■■■■□ 3.11
HOXB3-201ENST00000311626 UHRF1BP1Q6BDS2 1440 aa34.46■■■■□ 3.11
HOXB3-201ENST00000311626 RALGAPBQ86X10 1494 aa34.46■■■■□ 3.11
HOXB3-201ENST00000311626 TMC1Q8TDI8 760 aa34.44■■■■□ 3.1
HOXB3-201ENST00000311626 ERICH6BQ5W0A0 696 aa34.41■■■■□ 3.1
HOXB3-201ENST00000311626 PNISRQ8TF01 805 aaKnown RBP34.39■■■■□ 3.1
HOXB3-201ENST00000311626 SAMD9LQ8IVG5 1584 aa34.39■■■■□ 3.1
HOXB3-201ENST00000311626 ROCK2O75116 1388 aaKnown RBP34.39■■■■□ 3.1
HOXB3-201ENST00000311626 NBPF1Q3BBV0 1214 aa34.37■■■■□ 3.09
HOXB3-201ENST00000311626 ARID4BQ4LE39 1312 aaPredicted RBP34.36■■■■□ 3.09
HOXB3-201ENST00000311626 CCDC141Q6ZP82 1450 aa34.35■■■■□ 3.09
HOXB3-201ENST00000311626 KDM5DQ9BY66 1539 aa34.34■■■■□ 3.09
HOXB3-201ENST00000311626 CDC42BPBQ9Y5S2 1711 aa34.34■■■■□ 3.09
HOXB3-201ENST00000311626 NUDCQ9Y266 331 aa34.34■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms