RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 CEP170Q5SW79 1584 aa8.4□□□□□ -1.06
SEC22A-201ENST00000309934 DISP1Q96F81 1524 aa8.4□□□□□ -1.06
SEC22A-201ENST00000309934 RAB3GAP2Q9H2M9 1393 aa8.4□□□□□ -1.07
SEC22A-201ENST00000309934 UHRF1BP1LA0JNW5 1464 aa8.39□□□□□ -1.07
SEC22A-201ENST00000309934 TCOF1Q13428 1488 aaKnown RBP8.38□□□□□ -1.07
SEC22A-201ENST00000309934 KCNH8Q96L42 1107 aa8.38□□□□□ -1.07
SEC22A-201ENST00000309934 HFM1A2PYH4 1435 aa8.38□□□□□ -1.07
SEC22A-201ENST00000309934 GLIPR1L2Q4G1C9 344 aa8.38□□□□□ -1.07
SEC22A-201ENST00000309934 SLC4A1APQ9BWU0 796 aaKnown RBP8.38□□□□□ -1.07
SEC22A-201ENST00000309934 PTPN23Q9H3S7 1636 aa8.37□□□□□ -1.07
SEC22A-201ENST00000309934 ABCC2Q92887 1545 aa8.37□□□□□ -1.07
SEC22A-201ENST00000309934 CHIC2Q9UKJ5 165 aa8.37□□□□□ -1.07
SEC22A-201ENST00000309934 NUP153P49790 1475 aaKnown RBP8.36□□□□□ -1.07
SEC22A-201ENST00000309934 PLB1Q6P1J6 1458 aa8.36□□□□□ -1.07
SEC22A-201ENST00000309934 NEUROD1Q13562 356 aa8.36□□□□□ -1.07
SEC22A-201ENST00000309934 STAC3Q96MF2 364 aa8.36□□□□□ -1.07
SEC22A-201ENST00000309934 ANP32EQ9BTT0 268 aa8.36□□□□□ -1.07
SEC22A-201ENST00000309934 RRP7BPQ9NSQ0 103 aa8.36□□□□□ -1.07
SEC22A-201ENST00000309934 DIEXFQ68CQ4 756 aaKnown RBP8.34□□□□□ -1.07
SEC22A-201ENST00000309934 ARHGAP5Q13017 1502 aa8.34□□□□□ -1.07
SEC22A-201ENST00000309934 ABCA8O94911 1581 aa8.34□□□□□ -1.07
SEC22A-201ENST00000309934 CDK13Q14004 1512 aaKnown RBP8.34□□□□□ -1.07
SEC22A-201ENST00000309934 ESF1Q9H501 851 aaKnown RBP8.34□□□□□ -1.07
SEC22A-201ENST00000309934 SHANK2Q9UPX8 1470 aa8.34□□□□□ -1.07
SEC22A-201ENST00000309934 DHX57Q6P158 1386 aaKnown RBP8.34□□□□□ -1.07
SEC22A-201ENST00000309934 DAPK1P53355 1430 aa8.33□□□□□ -1.08
SEC22A-201ENST00000309934 SPAG9O60271 1321 aaKnown RBP8.33□□□□□ -1.08
SEC22A-201ENST00000309934 KIAA1107Q9UPP5 1409 aa8.33□□□□□ -1.08
SEC22A-201ENST00000309934 CCDC141Q6ZP82 1450 aa8.33□□□□□ -1.08
SEC22A-201ENST00000309934 RTN4Q9NQC3 1192 aaKnown RBP8.33□□□□□ -1.08
SEC22A-201ENST00000309934 CHD1O14646 1710 aa8.32□□□□□ -1.08
SEC22A-201ENST00000309934 ATP10BO94823 1461 aa8.32□□□□□ -1.08
SEC22A-201ENST00000309934 CAMSAP2Q08AD1 1489 aa8.31□□□□□ -1.08
SEC22A-201ENST00000309934 NEFLP07196 543 aa8.3□□□□□ -1.08
SEC22A-201ENST00000309934 C9orf84Q5VXU9 1444 aa8.3□□□□□ -1.08
SEC22A-201ENST00000309934 MPHOSPH9Q99550 1183 aa8.3□□□□□ -1.08
SEC22A-201ENST00000309934 ADCY10Q96PN6 1610 aa8.29□□□□□ -1.08
SEC22A-201ENST00000309934 ANKRD50Q9ULJ7 1429 aa8.29□□□□□ -1.08
SEC22A-201ENST00000309934 SHROOM2Q13796 1616 aa8.29□□□□□ -1.08
SEC22A-201ENST00000309934 YTHDC1Q96MU7 727 aaKnown RBP8.29□□□□□ -1.08
SEC22A-201ENST00000309934 CFAP74Q9C0B2 1584 aa8.29□□□□□ -1.08
SEC22A-201ENST00000309934 GPATCH8Q9UKJ3 1502 aaKnown RBP8.29□□□□□ -1.08
SEC22A-201ENST00000309934 ARHGEF11O15085 1522 aa8.29□□□□□ -1.08
SEC22A-201ENST00000309934 CLASP1Q7Z460 1538 aa8.28□□□□□ -1.08
SEC22A-201ENST00000309934 KIF15Q9NS87 1388 aa8.28□□□□□ -1.08
SEC22A-201ENST00000309934 WDR7Q9Y4E6 1490 aa8.28□□□□□ -1.08
SEC22A-201ENST00000309934 ANP32CO43423 234 aa8.28□□□□□ -1.08
SEC22A-201ENST00000309934 EIF4G2P78344 907 aaKnown RBP eCLIP8.28□□□□□ -1.08
SEC22A-201ENST00000309934 ARAP3Q8WWN8 1544 aa8.28□□□□□ -1.08
SEC22A-201ENST00000309934 NUP155O75694 1391 aa8.28□□□□□ -1.08
SEC22A-201ENST00000309934 PLCH2O75038 1416 aa8.28□□□□□ -1.08
SEC22A-201ENST00000309934 CDCA8Q53HL2 280 aa8.28□□□□□ -1.08
SEC22A-201ENST00000309934 KDM5BQ9UGL1 1544 aa8.27□□□□□ -1.09
SEC22A-201ENST00000309934 ARHGEF5Q12774 1597 aa8.26□□□□□ -1.09
SEC22A-201ENST00000309934 DNMT1P26358 1616 aaKnown RBP8.26□□□□□ -1.09
SEC22A-201ENST00000309934 ADGRL2O95490 1459 aa8.26□□□□□ -1.09
SEC22A-201ENST00000309934 NAIPQ13075 1403 aa8.26□□□□□ -1.09
SEC22A-201ENST00000309934 RTEL1-TNFRSF6BF6WH68 1400 aa8.26□□□□□ -1.09
SEC22A-201ENST00000309934 ABCC5O15440 1437 aa8.26□□□□□ -1.09
SEC22A-201ENST00000309934 HDGFP51858 240 aaKnown RBP8.25□□□□□ -1.09
SEC22A-201ENST00000309934 HNRNPMP52272 730 aaKnown RBP eCLIP8.25□□□□□ -1.091e-9■■■■■ 33.1
SEC22A-201ENST00000309934 TEX14Q8IWB6 1497 aa8.25□□□□□ -1.09
SEC22A-201ENST00000309934 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.24□□□□□ -1.091e-6■■□□□ 11.9
SEC22A-201ENST00000309934 PLEKHG5O94827 1062 aa8.24□□□□□ -1.09
SEC22A-201ENST00000309934 ERBINQ96RT1 1412 aa8.24□□□□□ -1.09
SEC22A-201ENST00000309934 PKD2Q13563 968 aa8.23□□□□□ -1.09
SEC22A-201ENST00000309934 DUOX2Q9NRD8 1548 aa8.23□□□□□ -1.09
SEC22A-201ENST00000309934 PPP6R1Q9UPN7 881 aa8.23□□□□□ -1.09
SEC22A-201ENST00000309934 ADGBQ8N7X0 1667 aa8.23□□□□□ -1.09
SEC22A-201ENST00000309934 PKNOX2Q96KN3 472 aa8.22□□□□□ -1.09
SEC22A-201ENST00000309934 CCDC144AA2RUR9 1427 aa8.22□□□□□ -1.09
SEC22A-201ENST00000309934 NCOA1Q15788 1441 aa8.22□□□□□ -1.09
SEC22A-201ENST00000309934 PPP1R15AO75807 674 aaPredicted RBP8.22□□□□□ -1.09
SEC22A-201ENST00000309934 CD109Q6YHK3 1445 aa8.22□□□□□ -1.09
SEC22A-201ENST00000309934 GCC2Q8IWJ2 1684 aa8.21□□□□□ -1.09
SEC22A-201ENST00000309934 ABCC10Q5T3U5 1492 aa8.21□□□□□ -1.09
SEC22A-201ENST00000309934 ARID4BQ4LE39 1312 aaPredicted RBP8.21□□□□□ -1.1
SEC22A-201ENST00000309934 ASXL2Q76L83 1435 aa8.21□□□□□ -1.1
SEC22A-201ENST00000309934 MAPKBP1O60336 1514 aa8.2□□□□□ -1.1
SEC22A-201ENST00000309934 MYO5CQ9NQX4 1742 aa8.2□□□□□ -1.1
SEC22A-201ENST00000309934 STAG3Q9UJ98 1225 aa8.2□□□□□ -1.1
SEC22A-201ENST00000309934 ROCK2O75116 1388 aaKnown RBP8.2□□□□□ -1.1
SEC22A-201ENST00000309934 EIF3AQ14152 1382 aaKnown RBP8.2□□□□□ -1.1
SEC22A-201ENST00000309934 FANCAO15360 1455 aa8.2□□□□□ -1.1
SEC22A-201ENST00000309934 ADGRL1O94910 1474 aa8.2□□□□□ -1.1
SEC22A-201ENST00000309934 NEO1Q92859 1461 aa8.2□□□□□ -1.1
SEC22A-201ENST00000309934 ZNF518AQ6AHZ1 1483 aa8.19□□□□□ -1.1
SEC22A-201ENST00000309934 PREX2Q70Z35 1606 aa8.19□□□□□ -1.1
SEC22A-201ENST00000309934 SCAPERQ9BY12 1400 aa8.19□□□□□ -1.1
SEC22A-201ENST00000309934 ZNF326Q5BKZ1 582 aaKnown RBP8.19□□□□□ -1.1
SEC22A-201ENST00000309934 CYB5RLQ6IPT4 315 aa8.18□□□□□ -1.1
SEC22A-201ENST00000309934 DENND4BO75064 1496 aaPredicted RBP8.18□□□□□ -1.1
SEC22A-201ENST00000309934 MAST1Q9Y2H9 1570 aa8.18□□□□□ -1.1
SEC22A-201ENST00000309934 ZCCHC11Q5TAX3 1644 aaKnown RBP8.17□□□□□ -1.1
SEC22A-201ENST00000309934 KIF3BO15066 747 aa8.17□□□□□ -1.1
SEC22A-201ENST00000309934 ZNF644Q9H582 1327 aaPredicted RBP8.17□□□□□ -1.1
SEC22A-201ENST00000309934 RTL5Q5HYW3 569 aaPredicted RBP8.17□□□□□ -1.1
SEC22A-201ENST00000309934 ANO8Q9HCE9 1232 aaPredicted RBP8.17□□□□□ -1.1
SEC22A-201ENST00000309934 MAGI3Q5TCQ9 1506 aa8.16□□□□□ -1.1
SEC22A-201ENST00000309934 CCDC136Q96JN2 1154 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 183 ms