RNA–Protein interactions for RNA: ENST00000308769.12

RFWD2-201, Transcript of E3 ubiquitin-protein ligase RFWD2, humanhuman

TSL 1 (best) BASIC

Gene RFWD2, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2-201ENST00000308769 CDC42BPAQ5VT25 1732 aa34.92■■■■□ 3.18
RFWD2-201ENST00000308769 PLEKHD1A6NEE1 506 aa34.91■■■■□ 3.18
RFWD2-201ENST00000308769 CFDP1Q9UEE9 299 aaPredicted RBP34.91■■■■□ 3.18
RFWD2-201ENST00000308769 ROCK1Q13464 1354 aa34.87■■■■□ 3.17
RFWD2-201ENST00000308769 ABCC10Q5T3U5 1492 aa34.86■■■■□ 3.17
RFWD2-201ENST00000308769 CLASP1Q7Z460 1538 aa34.83■■■■□ 3.17
RFWD2-201ENST00000308769 TIMELESSQ9UNS1 1208 aa34.83■■■■□ 3.17
RFWD2-201ENST00000308769 CROCC2H7BZ55 1655 aa34.82■■■■□ 3.16
RFWD2-201ENST00000308769 ZNF777Q9ULD5 760 aaPredicted RBP34.81■■■■□ 3.16
RFWD2-201ENST00000308769 DENND4BO75064 1496 aaPredicted RBP34.8■■■■□ 3.16
RFWD2-201ENST00000308769 ADGBQ8N7X0 1667 aa34.79■■■■□ 3.16
RFWD2-201ENST00000308769 TRIM52Q96A61 297 aa34.78■■■■□ 3.16
RFWD2-201ENST00000308769 MIER1Q8N108 512 aa34.75■■■■□ 3.15
RFWD2-201ENST00000308769 TONSLQ96HA7 1378 aa34.72■■■■□ 3.15
RFWD2-201ENST00000308769 ABCC2Q92887 1545 aa34.71■■■■□ 3.15
RFWD2-201ENST00000308769 PPP1R15AO75807 674 aaPredicted RBP34.69■■■■□ 3.14
RFWD2-201ENST00000308769 NCOA1Q15788 1441 aa34.66■■■■□ 3.14
RFWD2-201ENST00000308769 MPHOSPH9Q99550 1183 aa34.66■■■■□ 3.14
RFWD2-201ENST00000308769 ADGRL2O95490 1459 aa34.66■■■■□ 3.14
RFWD2-201ENST00000308769 CDC42BPBQ9Y5S2 1711 aa34.65■■■■□ 3.14
RFWD2-201ENST00000308769 PREX2Q70Z35 1606 aa34.63■■■■□ 3.13
RFWD2-201ENST00000308769 TTC37Q6PGP7 1564 aa34.58■■■■□ 3.13
RFWD2-201ENST00000308769 KDM5BQ9UGL1 1544 aa34.57■■■■□ 3.13
RFWD2-201ENST00000308769 SHANK2Q9UPX8 1470 aa34.56■■■■□ 3.12
RFWD2-201ENST00000308769 SAMD9LQ8IVG5 1584 aa34.55■■■■□ 3.12
RFWD2-201ENST00000308769 ACIN1Q9UKV3 1341 aaKnown RBP34.55■■■■□ 3.12
RFWD2-201ENST00000308769 ANKRD30AQ9BXX3 1397 aa34.54■■■■□ 3.12
RFWD2-201ENST00000308769 FOXD1Q16676 465 aa34.54■■■■□ 3.12
RFWD2-201ENST00000308769 ZCCHC11Q5TAX3 1644 aaKnown RBP34.54■■■■□ 3.12
RFWD2-201ENST00000308769 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.53■■■■□ 3.12
RFWD2-201ENST00000308769 C9orf84Q5VXU9 1444 aa34.52■■■■□ 3.12
RFWD2-201ENST00000308769 ARHGEF5Q12774 1597 aa34.51■■■■□ 3.12
RFWD2-201ENST00000308769 UHRF1BP1LA0JNW5 1464 aa34.48■■■■□ 3.11
RFWD2-201ENST00000308769 MBD5Q9P267 1494 aa34.47■■■■□ 3.11
RFWD2-201ENST00000308769 HNRNPMP52272 730 aaKnown RBP eCLIP34.47■■■■□ 3.113e-6■■■■□ 24.2
RFWD2-201ENST00000308769 MYO5CQ9NQX4 1742 aa34.47■■■■□ 3.11
RFWD2-201ENST00000308769 PZPP20742 1482 aa34.46■■■■□ 3.11
RFWD2-201ENST00000308769 SLC4A1APQ9BWU0 796 aaKnown RBP34.45■■■■□ 3.11
RFWD2-201ENST00000308769 ANKRD50Q9ULJ7 1429 aa34.44■■■■□ 3.1
RFWD2-201ENST00000308769 ANKRD30BQ9BXX2 1392 aa34.43■■■■□ 3.1
RFWD2-201ENST00000308769 ARHGAP5Q13017 1502 aa34.43■■■■□ 3.1
RFWD2-201ENST00000308769 TSPY4P0CV99 314 aa34.4■■■■□ 3.1
RFWD2-201ENST00000308769 TSPY10P0CW01 314 aa34.4■■■■□ 3.1
RFWD2-201ENST00000308769 CCDC141Q6ZP82 1450 aa34.4■■■■□ 3.1
RFWD2-201ENST00000308769 SYCP2Q9BX26 1530 aa34.39■■■■□ 3.1
RFWD2-201ENST00000308769 HIRIP3Q9BW71 556 aaPredicted RBP34.38■■■■□ 3.09
RFWD2-201ENST00000308769 CENPBP07199 599 aaPredicted RBP34.37■■■■□ 3.09
RFWD2-201ENST00000308769 YTHDC1Q96MU7 727 aaKnown RBP34.37■■■■□ 3.09
RFWD2-201ENST00000308769 KCNH8Q96L42 1107 aa34.37■■■■□ 3.09
RFWD2-201ENST00000308769 RPRD2Q5VT52 1461 aaKnown RBP34.36■■■■□ 3.09
RFWD2-201ENST00000308769 KIF15Q9NS87 1388 aa34.32■■■■□ 3.08
RFWD2-201ENST00000308769 L3MBTL2Q969R5 705 aa34.28■■■■□ 3.08
RFWD2-201ENST00000308769 SCAF1Q9H7N4 1312 aaKnown RBP34.27■■■■□ 3.08
RFWD2-201ENST00000308769 TEX14Q8IWB6 1497 aa34.26■■■■□ 3.08
RFWD2-201ENST00000308769 KIAA1107Q9UPP5 1409 aa34.26■■■■□ 3.08
RFWD2-201ENST00000308769 RSPH4AQ5TD94 716 aa34.25■■■■□ 3.07
RFWD2-201ENST00000308769 MAST1Q9Y2H9 1570 aa34.24■■■■□ 3.07
RFWD2-201ENST00000308769 DDX10Q13206 875 aaKnown RBP34.23■■■■□ 3.07
RFWD2-201ENST00000308769 PLCH2O75038 1416 aa34.22■■■■□ 3.07
RFWD2-201ENST00000308769 KDM5DQ9BY66 1539 aa34.22■■■■□ 3.07
RFWD2-201ENST00000308769 NUP155O75694 1391 aa34.22■■■■□ 3.07
RFWD2-201ENST00000308769 PLEKHH2Q8IVE3 1493 aa34.21■■■■□ 3.07
RFWD2-201ENST00000308769 PKD2Q13563 968 aa34.21■■■■□ 3.07
RFWD2-201ENST00000308769 ARHGEF12Q9NZN5 1544 aa34.19■■■■□ 3.06
RFWD2-201ENST00000308769 PLXNC1O60486 1568 aa34.14■■■■□ 3.06
RFWD2-201ENST00000308769 ABCC1P33527 1531 aa34.13■■■■□ 3.05
RFWD2-201ENST00000308769 WDR7Q9Y4E6 1490 aa34.12■■■■□ 3.05
RFWD2-201ENST00000308769 EFCAB2Q5VUJ9 269 aa34.09■■■■□ 3.05
RFWD2-201ENST00000308769 OSCARQ8IYS5 282 aa34.09■■■■□ 3.05
RFWD2-201ENST00000308769 NBPF8Q3BBV2 869 aa34.07■■■■□ 3.04
RFWD2-201ENST00000308769 FAM135AQ9P2D6 1515 aa34.05■■■■□ 3.04
RFWD2-201ENST00000308769 HSPA5P11021 654 aaKnown RBP34.04■■■■□ 3.04
RFWD2-201ENST00000308769 UNC13BO14795 1591 aa34.04■■■■□ 3.04
RFWD2-201ENST00000308769 ARAP3Q8WWN8 1544 aa34.04■■■■□ 3.04
RFWD2-201ENST00000308769 TRAPPC8Q9Y2L5 1435 aa34.01■■■■□ 3.03
RFWD2-201ENST00000308769 ABCA9Q8IUA7 1624 aa34■■■■□ 3.03
RFWD2-201ENST00000308769 EIF4G2P78344 907 aaKnown RBP eCLIP33.99■■■■□ 3.032e-11■■■■■ 48.4
RFWD2-201ENST00000308769 DUOX2Q9NRD8 1548 aa33.98■■■■□ 3.03
RFWD2-201ENST00000308769 ASXL2Q76L83 1435 aa33.96■■■■□ 3.03
RFWD2-201ENST00000308769 IQGAP3Q86VI3 1631 aa33.91■■■■□ 3.02
RFWD2-201ENST00000308769 ERBINQ96RT1 1412 aa33.9■■■■□ 3.02
RFWD2-201ENST00000308769 GTF3C3Q9Y5Q9 886 aa33.9■■■■□ 3.02
RFWD2-201ENST00000308769 FANCAO15360 1455 aa33.9■■■■□ 3.02
RFWD2-201ENST00000308769 WASHC2AQ641Q2 1341 aa33.89■■■■□ 3.02
RFWD2-201ENST00000308769 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.88■■■■□ 3.013e-6■□□□□ 8.5
RFWD2-201ENST00000308769 ZFYVE16Q7Z3T8 1539 aa33.87■■■■□ 3.01
RFWD2-201ENST00000308769 MAGI2Q86UL8 1455 aa33.86■■■■□ 3.01
RFWD2-201ENST00000308769 AFAP1Q8N556 730 aa33.85■■■■□ 3.01
RFWD2-201ENST00000308769 SPAG9O60271 1321 aaKnown RBP33.83■■■■□ 3.01
RFWD2-201ENST00000308769 ZNF326Q5BKZ1 582 aaKnown RBP33.82■■■■□ 3
RFWD2-201ENST00000308769 SPATA31E1Q6ZUB1 1445 aa33.82■■■■□ 3
RFWD2-201ENST00000308769 ANP32CO43423 234 aa33.81■■■■□ 3
RFWD2-201ENST00000308769 RTEL1-TNFRSF6BF6WH68 1400 aa33.8■■■■□ 3
RFWD2-201ENST00000308769 POLR1AO95602 1720 aaPredicted RBP33.79■■■■□ 3
RFWD2-201ENST00000308769 ADGRL1O94910 1474 aa33.77■■■■□ 3
RFWD2-201ENST00000308769 INO80Q9ULG1 1556 aaPredicted RBP33.77■■■■□ 3
RFWD2-201ENST00000308769 UHRF1BP1Q6BDS2 1440 aa33.77■■■■□ 3
RFWD2-201ENST00000308769 C11orf95C9JLR9 678 aaPredicted RBP33.76■■■□□ 2.99
RFWD2-201ENST00000308769 NPM1P06748 294 aaKnown RBP eCLIP33.76■■■□□ 2.99
RFWD2-201ENST00000308769 PLA2R1Q13018 1463 aa33.75■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms