RNA–Protein interactions for RNA: ENST00000308249.3

PPM1E-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPM1E, Length 6,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1E-201ENST00000308249 RTF1Q92541 710 aaKnown RBP19.99■□□□□ 0.79
PPM1E-201ENST00000308249 CHMP3Q9Y3E7 222 aa19.97■□□□□ 0.79
PPM1E-201ENST00000308249 SLKQ9H2G2 1235 aaPredicted RBP19.96■□□□□ 0.79
PPM1E-201ENST00000308249 GORABQ5T7V8 394 aa19.96■□□□□ 0.79
PPM1E-201ENST00000308249 HTATSF1O43719 755 aaKnown RBP19.96■□□□□ 0.79
PPM1E-201ENST00000308249 G3V3G9 751 aa19.96■□□□□ 0.79
PPM1E-201ENST00000308249 DCAF8Q5TAQ9 597 aa19.96■□□□□ 0.79
PPM1E-201ENST00000308249 GBP4Q96PP9 640 aa19.96■□□□□ 0.79
PPM1E-201ENST00000308249 SAFB2Q14151 953 aaKnown RBP eCLIP19.95■□□□□ 0.78
PPM1E-201ENST00000308249 PES1O00541 588 aaKnown RBP19.94■□□□□ 0.78
PPM1E-201ENST00000308249 NOL8Q76FK4 1167 aaKnown RBP19.94■□□□□ 0.78
PPM1E-201ENST00000308249 TPM3P06753 285 aa19.93■□□□□ 0.78
PPM1E-201ENST00000308249 MARCH6O60337 910 aa19.93■□□□□ 0.78
PPM1E-201ENST00000308249 SETQ01105 290 aaPredicted RBP19.93■□□□□ 0.78
PPM1E-201ENST00000308249 CALRP27797 417 aaKnown RBP19.92■□□□□ 0.78
PPM1E-201ENST00000308249 SRPK2P78362 688 aaKnown RBP19.91■□□□□ 0.78
PPM1E-201ENST00000308249 FOXD4L1Q9NU39 408 aa19.9■□□□□ 0.78
PPM1E-201ENST00000308249 PLEKHD1A6NEE1 506 aa19.9■□□□□ 0.78
PPM1E-201ENST00000308249 CSB-PGBD3P0DP91 1061 aa19.9■□□□□ 0.78
PPM1E-201ENST00000308249 SYAP1Q96A49 352 aaPredicted RBP19.9■□□□□ 0.78
PPM1E-201ENST00000308249 TAF7LQ5H9L4 462 aa19.89■□□□□ 0.77
PPM1E-201ENST00000308249 CCDC9Q9Y3X0 531 aaKnown RBP19.89■□□□□ 0.77
PPM1E-201ENST00000308249 TOMM22Q9NS69 142 aa19.89■□□□□ 0.77
PPM1E-201ENST00000308249 MLECQ14165 292 aa19.88■□□□□ 0.77
PPM1E-201ENST00000308249 CCAR2Q8N163 923 aaKnown RBP19.88■□□□□ 0.77
PPM1E-201ENST00000308249 CCDC34Q96HJ3 373 aa19.88■□□□□ 0.77
PPM1E-201ENST00000308249 PAK3O75914 559 aaPredicted RBP19.88■□□□□ 0.77
PPM1E-201ENST00000308249 CFAP44Q96MT7 982 aa19.86■□□□□ 0.77
PPM1E-201ENST00000308249 TRIM6-TRIM34B2RNG4 842 aa19.86■□□□□ 0.77
PPM1E-201ENST00000308249 FOXD4L5Q5VV16 416 aaPredicted RBP19.85■□□□□ 0.77
PPM1E-201ENST00000308249 FOXD4L4Q8WXT5 416 aaPredicted RBP19.85■□□□□ 0.77
PPM1E-201ENST00000308249 MORC1Q86VD1 984 aa19.85■□□□□ 0.77
PPM1E-201ENST00000308249 ITPRIPQ8IWB1 547 aa19.84■□□□□ 0.77
PPM1E-201ENST00000308249 PTMSP20962 102 aa19.83■□□□□ 0.76
PPM1E-201ENST00000308249 USP35Q9P2H5 1018 aa19.83■□□□□ 0.76
PPM1E-201ENST00000308249 CNKSR2Q8WXI2 1034 aa19.82■□□□□ 0.76
PPM1E-201ENST00000308249 MFAP1P55081 439 aaKnown RBP19.82■□□□□ 0.76
PPM1E-201ENST00000308249 TPD52L1Q16890 204 aaPredicted RBP19.82■□□□□ 0.76
PPM1E-201ENST00000308249 FRAT2O75474 233 aaPredicted RBP19.81■□□□□ 0.76
PPM1E-201ENST00000308249 GOLGA6L3A6NEY3 463 aa19.8■□□□□ 0.76
PPM1E-201ENST00000308249 CFDP1Q9UEE9 299 aaPredicted RBP19.79■□□□□ 0.76
PPM1E-201ENST00000308249 SF3A1Q15459 793 aaKnown RBP19.78■□□□□ 0.76
PPM1E-201ENST00000308249 TRHP20396 242 aaPredicted RBP19.78■□□□□ 0.76
PPM1E-201ENST00000308249 STK26Q9P289 416 aa19.78■□□□□ 0.76
PPM1E-201ENST00000308249 CALD1Q05682 793 aaKnown RBP19.77■□□□□ 0.76
PPM1E-201ENST00000308249 IPO8O15397 1037 aaKnown RBP19.77■□□□□ 0.75
PPM1E-201ENST00000308249 TMF1P82094 1093 aa19.76■□□□□ 0.75
PPM1E-201ENST00000308249 GPATCH3Q96I76 525 aa19.76■□□□□ 0.75
PPM1E-201ENST00000308249 TSR1Q2NL82 804 aaKnown RBP19.75■□□□□ 0.75
PPM1E-201ENST00000308249 RAD21O60216 631 aa19.74■□□□□ 0.75
PPM1E-201ENST00000308249 RRP12Q5JTH9 1297 aaKnown RBP19.74■□□□□ 0.75
PPM1E-201ENST00000308249 CSPP1Q1MSJ5 1256 aa19.73■□□□□ 0.75
PPM1E-201ENST00000308249 SLC4A10Q6U841 1118 aa19.72■□□□□ 0.75
PPM1E-201ENST00000308249 SIN3AQ96ST3 1273 aa19.72■□□□□ 0.75
PPM1E-201ENST00000308249 DCAF11Q8TEB1 546 aa19.71■□□□□ 0.75
PPM1E-201ENST00000308249 GTF2E1P29083 439 aaPredicted RBP19.7■□□□□ 0.74
PPM1E-201ENST00000308249 RWDD1Q9H446 243 aaPredicted RBP19.7■□□□□ 0.74
PPM1E-201ENST00000308249 FOXD4L6Q3SYB3 417 aaPredicted RBP19.7■□□□□ 0.74
PPM1E-201ENST00000308249 FOXD4L3Q6VB84 417 aaPredicted RBP19.7■□□□□ 0.74
PPM1E-201ENST00000308249 TCEAL9Q9UHQ7 104 aa19.69■□□□□ 0.74
PPM1E-201ENST00000308249 PCMTD1Q96MG8 357 aaPredicted RBP19.68■□□□□ 0.74
PPM1E-201ENST00000308249 RBM19Q9Y4C8 960 aaKnown RBP19.68■□□□□ 0.74
PPM1E-201ENST00000308249 ZNF592Q92610 1267 aa19.68■□□□□ 0.74
PPM1E-201ENST00000308249 U2AF1L5P0DN76 240 aaPredicted RBP19.67■□□□□ 0.74
PPM1E-201ENST00000308249 U2AF1Q01081 240 aaKnown RBP eCLIP19.67■□□□□ 0.74
PPM1E-201ENST00000308249 STK31Q9BXU1 1019 aa19.67■□□□□ 0.74
PPM1E-201ENST00000308249 ZNF771Q7L3S4 317 aaPredicted RBP19.67■□□□□ 0.74
PPM1E-201ENST00000308249 KIF16BQ96L93 1317 aa19.66■□□□□ 0.74
PPM1E-201ENST00000308249 H3BQV1 296 aa19.66■□□□□ 0.74
PPM1E-201ENST00000308249 IFFO2Q5TF58 517 aa19.66■□□□□ 0.74
PPM1E-201ENST00000308249 TPM2P07951 284 aa19.66■□□□□ 0.74
PPM1E-201ENST00000308249 CCDC70Q6NSX1 233 aa19.66■□□□□ 0.74
PPM1E-201ENST00000308249 HDGFP51858 240 aaKnown RBP19.65■□□□□ 0.74
PPM1E-201ENST00000308249 HSP90AA2PQ14568 343 aaPredicted RBP19.65■□□□□ 0.74
PPM1E-201ENST00000308249 HDGFL2Q7Z4V5 671 aaPredicted RBP19.65■□□□□ 0.74
PPM1E-201ENST00000308249 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.64■□□□□ 0.737e-10■■■■■ 125
PPM1E-201ENST00000308249 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.63■□□□□ 0.73
PPM1E-201ENST00000308249 PHF14O94880 888 aa19.62■□□□□ 0.73
PPM1E-201ENST00000308249 CTDP1Q9Y5B0 961 aaPredicted RBP19.62■□□□□ 0.73
PPM1E-201ENST00000308249 RSF1Q96T23 1441 aaPredicted RBP19.62■□□□□ 0.73
PPM1E-201ENST00000308249 GOLGA6L19H0YKK7 550 aa19.62■□□□□ 0.73
PPM1E-201ENST00000308249 GPS2Q13227 327 aa19.62■□□□□ 0.73
PPM1E-201ENST00000308249 TPM1P09493 284 aa19.62■□□□□ 0.73
PPM1E-201ENST00000308249 AKAP17AQ02040 695 aaKnown RBP19.61■□□□□ 0.73
PPM1E-201ENST00000308249 TCERG1O14776 1098 aaKnown RBP19.6■□□□□ 0.73
PPM1E-201ENST00000308249 BECN2A8MW95 431 aa19.59■□□□□ 0.73
PPM1E-201ENST00000308249 MSH5O43196 834 aa19.59■□□□□ 0.73
PPM1E-201ENST00000308249 FAM184AQ8NB25 1140 aa19.59■□□□□ 0.73
PPM1E-201ENST00000308249 CLUAP1Q96AJ1 413 aa19.59■□□□□ 0.73
PPM1E-201ENST00000308249 VSIG10Q8N0Z9 540 aa19.59■□□□□ 0.73
PPM1E-201ENST00000308249 SMC4Q9NTJ3 1288 aa19.59■□□□□ 0.73
PPM1E-201ENST00000308249 SPAG9O60271 1321 aaKnown RBP19.59■□□□□ 0.73
PPM1E-201ENST00000308249 MCTP1Q6DN14 999 aa19.58■□□□□ 0.72
PPM1E-201ENST00000308249 HMMRO75330 724 aa19.58■□□□□ 0.72
PPM1E-201ENST00000308249 ZCCHC6Q5VYS8 1495 aaKnown RBP19.57■□□□□ 0.72
PPM1E-201ENST00000308249 CLIP1P30622 1438 aa19.57■□□□□ 0.72
PPM1E-201ENST00000308249 KIF3AQ9Y496 699 aa19.56■□□□□ 0.72
PPM1E-201ENST00000308249 LTV1Q96GA3 475 aaPredicted RBP19.56■□□□□ 0.72
PPM1E-201ENST00000308249 TRIM34Q9BYJ4 488 aa19.55■□□□□ 0.72
PPM1E-201ENST00000308249 PMFBP1Q8TBY8 1022 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms