RNA–Protein interactions for RNA: ENST00000306320.9

RETREG1-201, Transcript of reticulophagy regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG1, Length 3,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-201ENST00000306320 L3MBTL2Q969R5 705 aa24.48■■□□□ 1.51
RETREG1-201ENST00000306320 SLC4A1APQ9BWU0 796 aaKnown RBP24.48■■□□□ 1.51
RETREG1-201ENST00000306320 HFM1A2PYH4 1435 aa24.46■■□□□ 1.51
RETREG1-201ENST00000306320 TARBP1Q13395 1621 aaKnown RBP24.46■■□□□ 1.51
RETREG1-201ENST00000306320 MRS2Q9HD23 443 aa24.45■■□□□ 1.51
RETREG1-201ENST00000306320 LAS1LQ9Y4W2 734 aaKnown RBP24.45■■□□□ 1.51
RETREG1-201ENST00000306320 ANP32AP39687 249 aaKnown RBP24.45■■□□□ 1.5
RETREG1-201ENST00000306320 MRC2Q9UBG0 1479 aa24.44■■□□□ 1.5
RETREG1-201ENST00000306320 CFDP1Q9UEE9 299 aaPredicted RBP24.44■■□□□ 1.5
RETREG1-201ENST00000306320 UACAQ9BZF9 1416 aa24.44■■□□□ 1.5
RETREG1-201ENST00000306320 EPRSP07814 1512 aaKnown RBP24.44■■□□□ 1.5
RETREG1-201ENST00000306320 ZBTB47Q9UFB7 747 aaPredicted RBP24.42■■□□□ 1.5
RETREG1-201ENST00000306320 THOC2Q8NI27 1593 aaKnown RBP24.42■■□□□ 1.5
RETREG1-201ENST00000306320 SAMD9Q5K651 1589 aa24.41■■□□□ 1.5
RETREG1-201ENST00000306320 PTPN23Q9H3S7 1636 aa24.39■■□□□ 1.5
RETREG1-201ENST00000306320 PRG4Q92954 1404 aaPredicted RBP24.39■■□□□ 1.5
RETREG1-201ENST00000306320 IQGAP2Q13576 1575 aa24.39■■□□□ 1.5
RETREG1-201ENST00000306320 EIF5BO60841 1220 aaKnown RBP24.39■■□□□ 1.49
RETREG1-201ENST00000306320 MYT1LQ9UL68 1186 aa24.37■■□□□ 1.49
RETREG1-201ENST00000306320 JPH4Q96JJ6 628 aa24.37■■□□□ 1.49
RETREG1-201ENST00000306320 KDM6BO15054 1643 aa24.37■■□□□ 1.49
RETREG1-201ENST00000306320 C11orf95C9JLR9 678 aaPredicted RBP24.36■■□□□ 1.49
RETREG1-201ENST00000306320 SUPT6HQ7KZ85 1726 aaKnown RBP24.36■■□□□ 1.49
RETREG1-201ENST00000306320 EHBP1L1Q8N3D4 1523 aa24.34■■□□□ 1.49
RETREG1-201ENST00000306320 NBPF8Q3BBV2 869 aa24.34■■□□□ 1.49
RETREG1-201ENST00000306320 TIMELESSQ9UNS1 1208 aa24.34■■□□□ 1.49
RETREG1-201ENST00000306320 KDM2AQ9Y2K7 1162 aa24.34■■□□□ 1.49
RETREG1-201ENST00000306320 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.34■■□□□ 1.49
RETREG1-201ENST00000306320 PLB1Q6P1J6 1458 aa24.33■■□□□ 1.48
RETREG1-201ENST00000306320 WASHC2AQ641Q2 1341 aa24.32■■□□□ 1.48
RETREG1-201ENST00000306320 UGGT2Q9NYU1 1516 aa24.31■■□□□ 1.48
RETREG1-201ENST00000306320 EIF4G2P78344 907 aaKnown RBP eCLIP24.31■■□□□ 1.48
RETREG1-201ENST00000306320 PBRM1Q86U86 1689 aa24.3■■□□□ 1.48
RETREG1-201ENST00000306320 ADAMTS12P58397 1594 aa24.27■■□□□ 1.48
RETREG1-201ENST00000306320 HNRNPMP52272 730 aaKnown RBP eCLIP24.26■■□□□ 1.47
RETREG1-201ENST00000306320 PKD2Q13563 968 aa24.23■■□□□ 1.47
RETREG1-201ENST00000306320 IFT140Q96RY7 1462 aa24.23■■□□□ 1.47
RETREG1-201ENST00000306320 HECW1Q76N89 1606 aa24.23■■□□□ 1.47
RETREG1-201ENST00000306320 PLEKHD1A6NEE1 506 aa24.23■■□□□ 1.47
RETREG1-201ENST00000306320 NEFMP07197 916 aa24.23■■□□□ 1.47
RETREG1-201ENST00000306320 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.22■■□□□ 1.47
RETREG1-201ENST00000306320 DISP1Q96F81 1524 aa24.22■■□□□ 1.47
RETREG1-201ENST00000306320 NUP153P49790 1475 aaKnown RBP24.21■■□□□ 1.47
RETREG1-201ENST00000306320 DENND4BO75064 1496 aaPredicted RBP24.21■■□□□ 1.47
RETREG1-201ENST00000306320 GRIN2AQ12879 1464 aa24.2■■□□□ 1.46
RETREG1-201ENST00000306320 ABCC5O15440 1437 aa24.2■■□□□ 1.46
RETREG1-201ENST00000306320 IPO9Q96P70 1041 aaKnown RBP24.19■■□□□ 1.46
RETREG1-201ENST00000306320 WDR62O43379 1518 aa24.18■■□□□ 1.46
RETREG1-201ENST00000306320 DAPK1P53355 1430 aa24.18■■□□□ 1.46
RETREG1-201ENST00000306320 KIAA0586Q9BVV6 1533 aa24.18■■□□□ 1.46
RETREG1-201ENST00000306320 RGL3Q3MIN7 710 aa24.15■■□□□ 1.46
RETREG1-201ENST00000306320 EIF4G3O43432 1585 aaKnown RBP24.12■■□□□ 1.45
RETREG1-201ENST00000306320 AKNAQ7Z591 1439 aa24.12■■□□□ 1.45
RETREG1-201ENST00000306320 ARHGEF11O15085 1522 aa24.09■■□□□ 1.45
RETREG1-201ENST00000306320 TSPY4P0CV99 314 aa24.09■■□□□ 1.45
RETREG1-201ENST00000306320 TSPY10P0CW01 314 aa24.09■■□□□ 1.45
RETREG1-201ENST00000306320 KIAA0556O60303 1618 aa24.08■■□□□ 1.45
RETREG1-201ENST00000306320 MIA2Q96PC5 1412 aa24.07■■□□□ 1.44
RETREG1-201ENST00000306320 PRKRIP1Q9H875 184 aaPredicted RBP24.06■■□□□ 1.44
RETREG1-201ENST00000306320 TCOF1Q13428 1488 aaKnown RBP24.06■■□□□ 1.44
RETREG1-201ENST00000306320 NUP155O75694 1391 aa24.05■■□□□ 1.44
RETREG1-201ENST00000306320 ANKRD30BQ9BXX2 1392 aa24.05■■□□□ 1.44
RETREG1-201ENST00000306320 KDM5BQ9UGL1 1544 aa24.04■■□□□ 1.44
RETREG1-201ENST00000306320 DCAF11Q8TEB1 546 aa24.03■■□□□ 1.44
RETREG1-201ENST00000306320 BRPF3Q9ULD4 1205 aa24.03■■□□□ 1.44
RETREG1-201ENST00000306320 KIF7Q2M1P5 1343 aa24.02■■□□□ 1.44
RETREG1-201ENST00000306320 SKAP1Q86WV1 359 aa24.02■■□□□ 1.44
RETREG1-201ENST00000306320 TROQ12816 1431 aaPredicted RBP24.02■■□□□ 1.44
RETREG1-201ENST00000306320 SLC4A3P48751 1232 aa24.02■■□□□ 1.44
RETREG1-201ENST00000306320 CARMIL2Q6F5E8 1435 aa24.01■■□□□ 1.43
RETREG1-201ENST00000306320 ERICH6BQ5W0A0 696 aa24.01■■□□□ 1.43
RETREG1-201ENST00000306320 CEP170Q5SW79 1584 aa24.01■■□□□ 1.43
RETREG1-201ENST00000306320 CAMSAP2Q08AD1 1489 aa24■■□□□ 1.43
RETREG1-201ENST00000306320 RAPGEF6Q8TEU7 1601 aa23.99■■□□□ 1.43
RETREG1-201ENST00000306320 KIF14Q15058 1648 aa23.99■■□□□ 1.43
RETREG1-201ENST00000306320 GPATCH8Q9UKJ3 1502 aaKnown RBP23.98■■□□□ 1.43
RETREG1-201ENST00000306320 CCDC7Q96M83 1385 aa23.97■■□□□ 1.43
RETREG1-201ENST00000306320 SYNJ2O15056 1496 aa23.96■■□□□ 1.43
RETREG1-201ENST00000306320 CARD11Q9BXL7 1154 aa23.96■■□□□ 1.43
RETREG1-201ENST00000306320 ZBED9Q6R2W3 1325 aa23.96■■□□□ 1.43
RETREG1-201ENST00000306320 NCOA1Q15788 1441 aa23.95■■□□□ 1.42
RETREG1-201ENST00000306320 DAXXQ9UER7 740 aaPredicted RBP23.95■■□□□ 1.42
RETREG1-201ENST00000306320 ARXQ96QS3 562 aa23.94■■□□□ 1.42
RETREG1-201ENST00000306320 ANKRD30AQ9BXX3 1397 aa23.92■■□□□ 1.42
RETREG1-201ENST00000306320 PTPRGP23470 1445 aa23.92■■□□□ 1.42
RETREG1-201ENST00000306320 ANKRD50Q9ULJ7 1429 aa23.91■■□□□ 1.42
RETREG1-201ENST00000306320 ST20-MTHFSA0A0A6YYL1 179 aa23.89■■□□□ 1.42
RETREG1-201ENST00000306320 TMC1Q8TDI8 760 aa23.89■■□□□ 1.42
RETREG1-201ENST00000306320 EXOC6Q8TAG9 804 aa23.88■■□□□ 1.41
RETREG1-201ENST00000306320 ATP10BO94823 1461 aa23.88■■□□□ 1.41
RETREG1-201ENST00000306320 RPRD2Q5VT52 1461 aaKnown RBP23.87■■□□□ 1.41
RETREG1-201ENST00000306320 NUDCQ9Y266 331 aa23.87■■□□□ 1.41
RETREG1-201ENST00000306320 MAGI1Q96QZ7 1491 aaPredicted RBP23.87■■□□□ 1.41
RETREG1-201ENST00000306320 ROCK1Q13464 1354 aa23.87■■□□□ 1.41
RETREG1-201ENST00000306320 PZPP20742 1482 aa23.86■■□□□ 1.41
RETREG1-201ENST00000306320 USP47Q96K76 1375 aa23.85■■□□□ 1.41
RETREG1-201ENST00000306320 CNTLNQ9NXG0 1405 aa23.85■■□□□ 1.41
RETREG1-201ENST00000306320 GCC2Q8IWJ2 1684 aa23.85■■□□□ 1.41
RETREG1-201ENST00000306320 SENP3Q9H4L4 574 aaPredicted RBP23.84■■□□□ 1.41
RETREG1-201ENST00000306320 KIF15Q9NS87 1388 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms