RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 TRIM26Q12899 539 aaPredicted RBP12.27□□□□□ -0.45
TM4SF1-201ENST00000305366 AFAP1Q8N556 730 aa12.27□□□□□ -0.45
TM4SF1-201ENST00000305366 FMN1Q68DA7 1419 aa12.26□□□□□ -0.45
TM4SF1-201ENST00000305366 ARHGAP35Q9NRY4 1499 aa12.26□□□□□ -0.45
TM4SF1-201ENST00000305366 PLCH2O75038 1416 aa12.26□□□□□ -0.45
TM4SF1-201ENST00000305366 FRMPD1Q5SYB0 1578 aa12.25□□□□□ -0.45
TM4SF1-201ENST00000305366 TTC37Q6PGP7 1564 aa12.24□□□□□ -0.45
TM4SF1-201ENST00000305366 CEBPAP49715 358 aaPredicted RBP12.24□□□□□ -0.45
TM4SF1-201ENST00000305366 POGZQ7Z3K3 1410 aa12.22□□□□□ -0.45
TM4SF1-201ENST00000305366 ZNF777Q9ULD5 760 aaPredicted RBP12.22□□□□□ -0.45
TM4SF1-201ENST00000305366 ADAMTSL3P82987 1691 aa12.21□□□□□ -0.45
TM4SF1-201ENST00000305366 ZFYVE16Q7Z3T8 1539 aa12.2□□□□□ -0.46
TM4SF1-201ENST00000305366 FBXO41Q8TF61 875 aa12.2□□□□□ -0.46
TM4SF1-201ENST00000305366 MADDQ8WXG6 1647 aa12.2□□□□□ -0.46
TM4SF1-201ENST00000305366 CLIP1P30622 1438 aa12.19□□□□□ -0.46
TM4SF1-201ENST00000305366 TROQ12816 1431 aaPredicted RBP12.19□□□□□ -0.46
TM4SF1-201ENST00000305366 BCORL1Q5H9F3 1711 aa12.18□□□□□ -0.46
TM4SF1-201ENST00000305366 HECW1Q76N89 1606 aa12.18□□□□□ -0.46
TM4SF1-201ENST00000305366 ARHGEF40Q8TER5 1519 aa12.18□□□□□ -0.46
TM4SF1-201ENST00000305366 ATP10AO60312 1499 aa12.17□□□□□ -0.46
TM4SF1-201ENST00000305366 ARHGAP5Q13017 1502 aa12.17□□□□□ -0.46
TM4SF1-201ENST00000305366 MAGI2Q86UL8 1455 aa12.16□□□□□ -0.46
TM4SF1-201ENST00000305366 LMTK3Q96Q04 1460 aa12.16□□□□□ -0.46
TM4SF1-201ENST00000305366 ESF1Q9H501 851 aaKnown RBP12.16□□□□□ -0.46
TM4SF1-201ENST00000305366 CFAP74Q9C0B2 1584 aa12.16□□□□□ -0.46
TM4SF1-201ENST00000305366 RICTORQ6R327 1708 aa12.15□□□□□ -0.46
TM4SF1-201ENST00000305366 RIMS1Q86UR5 1692 aaKnown RBP12.15□□□□□ -0.46
TM4SF1-201ENST00000305366 PCF11O94913 1555 aaKnown RBP12.14□□□□□ -0.47
TM4SF1-201ENST00000305366 KIF14Q15058 1648 aa12.14□□□□□ -0.47
TM4SF1-201ENST00000305366 HNRNPMP52272 730 aaKnown RBP eCLIP12.14□□□□□ -0.47
TM4SF1-201ENST00000305366 C9orf84Q5VXU9 1444 aa12.13□□□□□ -0.47
TM4SF1-201ENST00000305366 ZMYM4Q5VZL5 1548 aa12.13□□□□□ -0.47
TM4SF1-201ENST00000305366 CASKIN1Q8WXD9 1431 aa12.12□□□□□ -0.47
TM4SF1-201ENST00000305366 TRAPPC8Q9Y2L5 1435 aa12.12□□□□□ -0.47
TM4SF1-201ENST00000305366 ZNF518AQ6AHZ1 1483 aa12.11□□□□□ -0.47
TM4SF1-201ENST00000305366 SIGLEC1Q9BZZ2 1709 aa12.1□□□□□ -0.47
TM4SF1-201ENST00000305366 CFDP1Q9UEE9 299 aaPredicted RBP12.1□□□□□ -0.47
TM4SF1-201ENST00000305366 CERKQ8TCT0 537 aa12.09□□□□□ -0.47
TM4SF1-201ENST00000305366 ARHGEF12Q9NZN5 1544 aa12.08□□□□□ -0.48
TM4SF1-201ENST00000305366 SPAG9O60271 1321 aaKnown RBP12.08□□□□□ -0.48
TM4SF1-201ENST00000305366 DAXXQ9UER7 740 aaPredicted RBP12.07□□□□□ -0.48
TM4SF1-201ENST00000305366 CCDC18Q5T9S5 1454 aa12.07□□□□□ -0.48
TM4SF1-201ENST00000305366 MYO5CQ9NQX4 1742 aa12.06□□□□□ -0.48
TM4SF1-201ENST00000305366 ZNF644Q9H582 1327 aaPredicted RBP12.05□□□□□ -0.48
TM4SF1-201ENST00000305366 GGT6Q6P531 493 aa12.05□□□□□ -0.48
TM4SF1-201ENST00000305366 MTUS2Q5JR59 1369 aa12.05□□□□□ -0.48
TM4SF1-201ENST00000305366 CCNB3Q8WWL7 1395 aa12.05□□□□□ -0.48
TM4SF1-201ENST00000305366 ZEB1P37275 1124 aaPredicted RBP12.05□□□□□ -0.48
TM4SF1-201ENST00000305366 MLH3Q9UHC1 1453 aa12.04□□□□□ -0.48
TM4SF1-201ENST00000305366 DMRT2Q9Y5R5 561 aa12.04□□□□□ -0.48
TM4SF1-201ENST00000305366 PPARGC1BQ86YN6 1023 aaKnown RBP12.03□□□□□ -0.48
TM4SF1-201ENST00000305366 UHRF1BP1Q6BDS2 1440 aa12.03□□□□□ -0.48
TM4SF1-201ENST00000305366 FYCO1Q9BQS8 1478 aa12.03□□□□□ -0.48
TM4SF1-201ENST00000305366 GPATCH8Q9UKJ3 1502 aaKnown RBP12.02□□□□□ -0.48
TM4SF1-201ENST00000305366 LRRIQ1Q96JM4 1722 aa12.02□□□□□ -0.49
TM4SF1-201ENST00000305366 KDM5CP41229 1560 aa12.02□□□□□ -0.49
TM4SF1-201ENST00000305366 POTEHQ6S545 545 aa12.02□□□□□ -0.49
TM4SF1-201ENST00000305366 DIP2CQ9Y2E4 1556 aa12.01□□□□□ -0.49
TM4SF1-201ENST00000305366 FER1L4A9Z1Z3 1794 aa12.01□□□□□ -0.49
TM4SF1-201ENST00000305366 ABCC1P33527 1531 aa12□□□□□ -0.49
TM4SF1-201ENST00000305366 ZMYM3Q14202 1370 aa11.99□□□□□ -0.49
TM4SF1-201ENST00000305366 CDC42BPBQ9Y5S2 1711 aa11.99□□□□□ -0.49
TM4SF1-201ENST00000305366 ABCA6Q8N139 1617 aa11.98□□□□□ -0.49
TM4SF1-201ENST00000305366 NCKAP5LQ9HCH0 1330 aa11.98□□□□□ -0.49
TM4SF1-201ENST00000305366 SYCP2Q9BX26 1530 aa11.98□□□□□ -0.49
TM4SF1-201ENST00000305366 PREX2Q70Z35 1606 aa11.97□□□□□ -0.49
TM4SF1-201ENST00000305366 SAMD9LQ8IVG5 1584 aa11.96□□□□□ -0.5
TM4SF1-201ENST00000305366 AGLP35573 1532 aa11.95□□□□□ -0.5
TM4SF1-201ENST00000305366 CEP162Q5TB80 1403 aa11.95□□□□□ -0.5
TM4SF1-201ENST00000305366 KIAA1107Q9UPP5 1409 aa11.95□□□□□ -0.5
TM4SF1-201ENST00000305366 CNTLNQ9NXG0 1405 aa11.94□□□□□ -0.5
TM4SF1-201ENST00000305366 KIF3BO15066 747 aa11.94□□□□□ -0.5
TM4SF1-201ENST00000305366 A2MP01023 1474 aa11.93□□□□□ -0.5
TM4SF1-201ENST00000305366 ITSN2Q9NZM3 1697 aa11.93□□□□□ -0.5
TM4SF1-201ENST00000305366 PLEKHH2Q8IVE3 1493 aa11.93□□□□□ -0.5
TM4SF1-201ENST00000305366 KIDINS220Q9ULH0 1771 aa11.92□□□□□ -0.5
TM4SF1-201ENST00000305366 MYT1Q01538 1121 aa11.92□□□□□ -0.5
TM4SF1-201ENST00000305366 REREQ9P2R6 1566 aa11.92□□□□□ -0.5
TM4SF1-201ENST00000305366 FBXO31Q5XUX0 539 aaPredicted RBP11.92□□□□□ -0.5
TM4SF1-201ENST00000305366 PREX1Q8TCU6 1659 aa11.91□□□□□ -0.5
TM4SF1-201ENST00000305366 CDC42BPAQ5VT25 1732 aa11.91□□□□□ -0.5
TM4SF1-201ENST00000305366 ATP7AQ04656 1500 aa11.9□□□□□ -0.5
TM4SF1-201ENST00000305366 TSPY4P0CV99 314 aa11.9□□□□□ -0.5
TM4SF1-201ENST00000305366 TSPY10P0CW01 314 aa11.9□□□□□ -0.5
TM4SF1-201ENST00000305366 PTPRTO14522 1441 aa11.9□□□□□ -0.51
TM4SF1-201ENST00000305366 ZNF335Q9H4Z2 1342 aaPredicted RBP11.9□□□□□ -0.51
TM4SF1-201ENST00000305366 WASHC2CQ9Y4E1 1318 aa11.89□□□□□ -0.51
TM4SF1-201ENST00000305366 C3P01024 1663 aa11.89□□□□□ -0.51
TM4SF1-201ENST00000305366 NCOA1Q15788 1441 aa11.88□□□□□ -0.51
TM4SF1-201ENST00000305366 DHX29Q7Z478 1369 aaKnown RBP11.88□□□□□ -0.51
TM4SF1-201ENST00000305366 MBD5Q9P267 1494 aa11.88□□□□□ -0.51
TM4SF1-201ENST00000305366 SUPT6HQ7KZ85 1726 aaKnown RBP11.88□□□□□ -0.51
TM4SF1-201ENST00000305366 DISP3Q9P2K9 1392 aa11.88□□□□□ -0.51
TM4SF1-201ENST00000305366 KANK4Q5T7N3 995 aaPredicted RBP11.87□□□□□ -0.51
TM4SF1-201ENST00000305366 PPP6R1Q9UPN7 881 aa11.87□□□□□ -0.51
TM4SF1-201ENST00000305366 NPATQ14207 1427 aa11.87□□□□□ -0.51
TM4SF1-201ENST00000305366 UBAP1LF5GYI3 381 aa11.87□□□□□ -0.51
TM4SF1-201ENST00000305366 PTPRKQ15262 1439 aa11.86□□□□□ -0.51
TM4SF1-201ENST00000305366 STRCQ7RTU9 1775 aa11.86□□□□□ -0.51
TM4SF1-201ENST00000305366 NCOA2Q15596 1464 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms