RNA–Protein interactions for RNA: ENST00000304523.9

LDB2-201, Transcript of LIM domain binding 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB2, Length 2,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-201ENST00000304523 LAMC3Q9Y6N6 1575 aa12.92□□□□□ -0.34
LDB2-201ENST00000304523 ANKRD30BQ9BXX2 1392 aa12.91□□□□□ -0.34
LDB2-201ENST00000304523 SMG6Q86US8 1419 aaKnown RBP12.91□□□□□ -0.34
LDB2-201ENST00000304523 FAM9BQ8IZU0 186 aa12.91□□□□□ -0.34
LDB2-201ENST00000304523 URB2Q14146 1524 aaKnown RBP12.91□□□□□ -0.34
LDB2-201ENST00000304523 GAPVD1Q14C86 1478 aa12.91□□□□□ -0.34
LDB2-201ENST00000304523 NESP48681 1621 aa12.9□□□□□ -0.34
LDB2-201ENST00000304523 EPRSP07814 1512 aaKnown RBP12.89□□□□□ -0.35
LDB2-201ENST00000304523 CHIC2Q9UKJ5 165 aa12.89□□□□□ -0.35
LDB2-201ENST00000304523 KIF7Q2M1P5 1343 aa12.89□□□□□ -0.35
LDB2-201ENST00000304523 RNF123Q5XPI4 1314 aa12.89□□□□□ -0.35
LDB2-201ENST00000304523 ROCK1Q13464 1354 aa12.89□□□□□ -0.35
LDB2-201ENST00000304523 NBPF8Q3BBV2 869 aa12.88□□□□□ -0.35
LDB2-201ENST00000304523 NOP58Q9Y2X3 529 aaKnown RBP12.88□□□□□ -0.35
LDB2-201ENST00000304523 DNMT1P26358 1616 aaKnown RBP12.87□□□□□ -0.35
LDB2-201ENST00000304523 TDRD9Q8NDG6 1382 aaKnown RBP12.86□□□□□ -0.35
LDB2-201ENST00000304523 DEKP35659 375 aaKnown RBP12.86□□□□□ -0.35
LDB2-201ENST00000304523 WDR62O43379 1518 aa12.86□□□□□ -0.35
LDB2-201ENST00000304523 DHX29Q7Z478 1369 aaKnown RBP12.85□□□□□ -0.35
LDB2-201ENST00000304523 DAPK1P53355 1430 aa12.84□□□□□ -0.35
LDB2-201ENST00000304523 MBD5Q9P267 1494 aa12.84□□□□□ -0.35
LDB2-201ENST00000304523 CDK13Q14004 1512 aaKnown RBP12.83□□□□□ -0.35
LDB2-201ENST00000304523 IQGAP2Q13576 1575 aa12.83□□□□□ -0.36
LDB2-201ENST00000304523 NUDCQ9Y266 331 aa12.83□□□□□ -0.36
LDB2-201ENST00000304523 FOXD1Q16676 465 aa12.83□□□□□ -0.36
LDB2-201ENST00000304523 BCORL1Q5H9F3 1711 aa12.82□□□□□ -0.36
LDB2-201ENST00000304523 TARBP1Q13395 1621 aaKnown RBP12.81□□□□□ -0.36
LDB2-201ENST00000304523 ABCC5O15440 1437 aa12.81□□□□□ -0.36
LDB2-201ENST00000304523 PAK3O75914 559 aaPredicted RBP12.81□□□□□ -0.36
LDB2-201ENST00000304523 KIF14Q15058 1648 aa12.8□□□□□ -0.36
LDB2-201ENST00000304523 PBRM1Q86U86 1689 aa12.8□□□□□ -0.36
LDB2-201ENST00000304523 ARID4BQ4LE39 1312 aaPredicted RBP12.79□□□□□ -0.36
LDB2-201ENST00000304523 KDM5CP41229 1560 aa12.79□□□□□ -0.36
LDB2-201ENST00000304523 PZPP20742 1482 aa12.78□□□□□ -0.36
LDB2-201ENST00000304523 IPO9Q96P70 1041 aaKnown RBP12.78□□□□□ -0.36
LDB2-201ENST00000304523 CCDC136Q96JN2 1154 aa12.77□□□□□ -0.37
LDB2-201ENST00000304523 ADGBQ8N7X0 1667 aa12.76□□□□□ -0.37
LDB2-201ENST00000304523 ADAMTS12P58397 1594 aa12.76□□□□□ -0.37
LDB2-201ENST00000304523 ANP32AP39687 249 aaKnown RBP12.76□□□□□ -0.37
LDB2-201ENST00000304523 SLC4A1APQ9BWU0 796 aaKnown RBP12.76□□□□□ -0.37
LDB2-201ENST00000304523 USP47Q96K76 1375 aa12.75□□□□□ -0.37
LDB2-201ENST00000304523 ROCK2O75116 1388 aaKnown RBP12.75□□□□□ -0.37
LDB2-201ENST00000304523 PNISRQ8TF01 805 aaKnown RBP12.74□□□□□ -0.37
LDB2-201ENST00000304523 LRPPRCP42704 1394 aaKnown RBP12.73□□□□□ -0.37
LDB2-201ENST00000304523 NBR1Q14596 966 aa12.73□□□□□ -0.37
LDB2-201ENST00000304523 KIAA1107Q9UPP5 1409 aa12.73□□□□□ -0.37
LDB2-201ENST00000304523 UHRF1BP1Q6BDS2 1440 aa12.72□□□□□ -0.37
LDB2-201ENST00000304523 PDS5BQ9NTI5 1447 aa12.72□□□□□ -0.37
LDB2-201ENST00000304523 CROCC2H7BZ55 1655 aa12.72□□□□□ -0.37
LDB2-201ENST00000304523 ADGRL2O95490 1459 aa12.71□□□□□ -0.37
LDB2-201ENST00000304523 RALGAPBQ86X10 1494 aa12.71□□□□□ -0.37
LDB2-201ENST00000304523 E9PCH4 1651 aa12.71□□□□□ -0.38
LDB2-201ENST00000304523 ITSN2Q9NZM3 1697 aa12.71□□□□□ -0.38
LDB2-201ENST00000304523 ZBTB47Q9UFB7 747 aaPredicted RBP12.7□□□□□ -0.38
LDB2-201ENST00000304523 KTN1Q86UP2 1357 aaKnown RBP12.7□□□□□ -0.38
LDB2-201ENST00000304523 NUP153P49790 1475 aaKnown RBP12.7□□□□□ -0.38
LDB2-201ENST00000304523 KIAA0556O60303 1618 aa12.7□□□□□ -0.38
LDB2-201ENST00000304523 ZNF644Q9H582 1327 aaPredicted RBP12.69□□□□□ -0.38
LDB2-201ENST00000304523 ARHGEF12Q9NZN5 1544 aa12.69□□□□□ -0.38
LDB2-201ENST00000304523 RAPGEF6Q8TEU7 1601 aa12.69□□□□□ -0.38
LDB2-201ENST00000304523 CAMSAP2Q08AD1 1489 aa12.69□□□□□ -0.38
LDB2-201ENST00000304523 BRD4O60885 1362 aaPredicted RBP12.68□□□□□ -0.38
LDB2-201ENST00000304523 KIF15Q9NS87 1388 aa12.68□□□□□ -0.38
LDB2-201ENST00000304523 DISP1Q96F81 1524 aa12.67□□□□□ -0.38
LDB2-201ENST00000304523 RTL5Q5HYW3 569 aaPredicted RBP12.67□□□□□ -0.38
LDB2-201ENST00000304523 ADCY10Q96PN6 1610 aa12.67□□□□□ -0.38
LDB2-201ENST00000304523 TMC1Q8TDI8 760 aa12.66□□□□□ -0.38
LDB2-201ENST00000304523 TCERG1O14776 1098 aaKnown RBP12.65□□□□□ -0.38
LDB2-201ENST00000304523 RRP1P56182 461 aaKnown RBP12.65□□□□□ -0.38
LDB2-201ENST00000304523 MYBBP1AQ9BQG0 1328 aaKnown RBP12.64□□□□□ -0.39
LDB2-201ENST00000304523 TROQ12816 1431 aaPredicted RBP12.64□□□□□ -0.39
LDB2-201ENST00000304523 KIAA0586Q9BVV6 1533 aa12.64□□□□□ -0.39
LDB2-201ENST00000304523 RALBP1Q15311 655 aa12.63□□□□□ -0.39
LDB2-201ENST00000304523 ARID3CA6NKF2 412 aa12.63□□□□□ -0.39
LDB2-201ENST00000304523 AEBP2Q6ZN18 517 aaPredicted RBP12.63□□□□□ -0.39
LDB2-201ENST00000304523 KDM5DQ9BY66 1539 aa12.63□□□□□ -0.39
LDB2-201ENST00000304523 GPATCH8Q9UKJ3 1502 aaKnown RBP12.63□□□□□ -0.39
LDB2-201ENST00000304523 MS4A1P11836 297 aa12.62□□□□□ -0.39
LDB2-201ENST00000304523 PKD2Q13563 968 aa12.62□□□□□ -0.39
LDB2-201ENST00000304523 POLR3GLQ9BT43 218 aa12.61□□□□□ -0.39
LDB2-201ENST00000304523 USP35Q9P2H5 1018 aa12.61□□□□□ -0.39
LDB2-201ENST00000304523 CEP170Q5SW79 1584 aa12.61□□□□□ -0.39
LDB2-201ENST00000304523 ANKRD30AQ9BXX3 1397 aa12.6□□□□□ -0.39
LDB2-201ENST00000304523 PDE3BQ13370 1112 aa12.6□□□□□ -0.39
LDB2-201ENST00000304523 ZMYM4Q5VZL5 1548 aa12.6□□□□□ -0.39
LDB2-201ENST00000304523 ANKRD50Q9ULJ7 1429 aa12.6□□□□□ -0.39
LDB2-201ENST00000304523 ZNF326Q5BKZ1 582 aaKnown RBP12.6□□□□□ -0.39
LDB2-201ENST00000304523 EXOC6Q8TAG9 804 aa12.6□□□□□ -0.39
LDB2-201ENST00000304523 RCAN3Q9UKA8 241 aa12.6□□□□□ -0.39
LDB2-201ENST00000304523 SHANK2Q9UPX8 1470 aa12.6□□□□□ -0.39
LDB2-201ENST00000304523 PRG4Q92954 1404 aaPredicted RBP12.6□□□□□ -0.39
LDB2-201ENST00000304523 CNGB1Q14028 1251 aaPredicted RBP12.59□□□□□ -0.39
LDB2-201ENST00000304523 BACH2Q9BYV9 841 aa12.59□□□□□ -0.39
LDB2-201ENST00000304523 PDE4AP27815 886 aa12.59□□□□□ -0.39
LDB2-201ENST00000304523 CARD11Q9BXL7 1154 aa12.59□□□□□ -0.39
LDB2-201ENST00000304523 CFDP1Q9UEE9 299 aaPredicted RBP12.59□□□□□ -0.39
LDB2-201ENST00000304523 INSRP06213 1382 aa12.59□□□□□ -0.39
LDB2-201ENST00000304523 PARD3Q8TEW0 1356 aa12.59□□□□□ -0.39
LDB2-201ENST00000304523 CDC42BPAQ5VT25 1732 aa12.59□□□□□ -0.39
LDB2-201ENST00000304523 PTPRGP23470 1445 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms