RNA–Protein interactions for RNA: ENST00000302101.5

NHLH1-201, Transcript of nescient helix-loop-helix 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLH1, Length 2,563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLH1-201ENST00000302101 CLSPNQ9HAW4 1339 aa32.39■■■□□ 2.78
NHLH1-201ENST00000302101 ZNF777Q9ULD5 760 aaPredicted RBP32.39■■■□□ 2.78
NHLH1-201ENST00000302101 KDM5BQ9UGL1 1544 aa32.38■■■□□ 2.77
NHLH1-201ENST00000302101 CAMSAP2Q08AD1 1489 aa32.37■■■□□ 2.77
NHLH1-201ENST00000302101 CENPBP07199 599 aaPredicted RBP32.37■■■□□ 2.77
NHLH1-201ENST00000302101 NAIPQ13075 1403 aa32.36■■■□□ 2.77
NHLH1-201ENST00000302101 DNMT1P26358 1616 aaKnown RBP32.36■■■□□ 2.77
NHLH1-201ENST00000302101 DAPK1P53355 1430 aa32.35■■■□□ 2.77
NHLH1-201ENST00000302101 RRP7BPQ9NSQ0 103 aa32.33■■■□□ 2.77
NHLH1-201ENST00000302101 ABCC5O15440 1437 aa32.32■■■□□ 2.76
NHLH1-201ENST00000302101 KCNH8Q96L42 1107 aa32.28■■■□□ 2.76
NHLH1-201ENST00000302101 GCC2Q8IWJ2 1684 aa32.26■■■□□ 2.76
NHLH1-201ENST00000302101 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.26■■■□□ 2.75
NHLH1-201ENST00000302101 AKNAQ7Z591 1439 aa32.25■■■□□ 2.75
NHLH1-201ENST00000302101 TTC37Q6PGP7 1564 aa32.25■■■□□ 2.75
NHLH1-201ENST00000302101 CDC42BPBQ9Y5S2 1711 aa32.25■■■□□ 2.75
NHLH1-201ENST00000302101 PREX2Q70Z35 1606 aa32.23■■■□□ 2.75
NHLH1-201ENST00000302101 MAPKBP1O60336 1514 aa32.22■■■□□ 2.75
NHLH1-201ENST00000302101 GTF3C3Q9Y5Q9 886 aa32.2■■■□□ 2.75
NHLH1-201ENST00000302101 ROCK1Q13464 1354 aa32.2■■■□□ 2.75
NHLH1-201ENST00000302101 CROCC2H7BZ55 1655 aa32.16■■■□□ 2.74
NHLH1-201ENST00000302101 MYO5CQ9NQX4 1742 aa32.16■■■□□ 2.74
NHLH1-201ENST00000302101 KDM6BO15054 1643 aa32.14■■■□□ 2.74
NHLH1-201ENST00000302101 SAMD9LQ8IVG5 1584 aa32.13■■■□□ 2.73
NHLH1-201ENST00000302101 ARHGAP5Q13017 1502 aa32.12■■■□□ 2.73
NHLH1-201ENST00000302101 ADGBQ8N7X0 1667 aa32.11■■■□□ 2.73
NHLH1-201ENST00000302101 HNRNPMP52272 730 aaKnown RBP eCLIP32.1■■■□□ 2.73
NHLH1-201ENST00000302101 WDR7Q9Y4E6 1490 aa32.09■■■□□ 2.73
NHLH1-201ENST00000302101 NCOA1Q15788 1441 aa32.07■■■□□ 2.72
NHLH1-201ENST00000302101 MBD5Q9P267 1494 aa32.05■■■□□ 2.72
NHLH1-201ENST00000302101 ARHGEF5Q12774 1597 aa32.05■■■□□ 2.72
NHLH1-201ENST00000302101 ADGRL2O95490 1459 aa32.04■■■□□ 2.72
NHLH1-201ENST00000302101 NPM1P06748 294 aaKnown RBP eCLIP32.04■■■□□ 2.72
NHLH1-201ENST00000302101 TRIM52Q96A61 297 aa32.04■■■□□ 2.72
NHLH1-201ENST00000302101 PLCH2O75038 1416 aa32.04■■■□□ 2.72
NHLH1-201ENST00000302101 TSPY4P0CV99 314 aa32.03■■■□□ 2.72
NHLH1-201ENST00000302101 TSPY10P0CW01 314 aa32.03■■■□□ 2.72
NHLH1-201ENST00000302101 YTHDC1Q96MU7 727 aaKnown RBP32.03■■■□□ 2.72
NHLH1-201ENST00000302101 SHANK2Q9UPX8 1470 aa32.02■■■□□ 2.72
NHLH1-201ENST00000302101 ASXL2Q76L83 1435 aa32.02■■■□□ 2.72
NHLH1-201ENST00000302101 ANKRD30AQ9BXX3 1397 aa32.02■■■□□ 2.72
NHLH1-201ENST00000302101 C9orf84Q5VXU9 1444 aa32.01■■■□□ 2.71
NHLH1-201ENST00000302101 SYCP2Q9BX26 1530 aa31.99■■■□□ 2.71
NHLH1-201ENST00000302101 MIER1Q8N108 512 aa31.99■■■□□ 2.71
NHLH1-201ENST00000302101 SIN3AQ96ST3 1273 aa31.99■■■□□ 2.71
NHLH1-201ENST00000302101 CCDC141Q6ZP82 1450 aa31.98■■■□□ 2.71
NHLH1-201ENST00000302101 RSPH4AQ5TD94 716 aa31.97■■■□□ 2.71
NHLH1-201ENST00000302101 EFCAB2Q5VUJ9 269 aa31.95■■■□□ 2.71
NHLH1-201ENST00000302101 PLEKHH2Q8IVE3 1493 aa31.93■■■□□ 2.7
NHLH1-201ENST00000302101 KIAA1107Q9UPP5 1409 aa31.92■■■□□ 2.7
NHLH1-201ENST00000302101 ABCA9Q8IUA7 1624 aa31.91■■■□□ 2.7
NHLH1-201ENST00000302101 MPHOSPH9Q99550 1183 aa31.88■■■□□ 2.69
NHLH1-201ENST00000302101 RIMBP3CA6NJZ7 1639 aa31.87■■■□□ 2.69
NHLH1-201ENST00000302101 RIMBP3BA6NNM3 1639 aa31.87■■■□□ 2.69
NHLH1-201ENST00000302101 RIMBP3Q9UFD9 1639 aa31.87■■■□□ 2.69
NHLH1-201ENST00000302101 ARAP3Q8WWN8 1544 aa31.87■■■□□ 2.69
NHLH1-201ENST00000302101 ARHGEF12Q9NZN5 1544 aa31.87■■■□□ 2.69
NHLH1-201ENST00000302101 ANKRD50Q9ULJ7 1429 aa31.87■■■□□ 2.69
NHLH1-201ENST00000302101 DENND4BO75064 1496 aaPredicted RBP31.87■■■□□ 2.69
NHLH1-201ENST00000302101 MYT1Q01538 1121 aa31.86■■■□□ 2.69
NHLH1-201ENST00000302101 CYB5RLQ6IPT4 315 aa31.86■■■□□ 2.69
NHLH1-201ENST00000302101 KIF15Q9NS87 1388 aa31.83■■■□□ 2.69
NHLH1-201ENST00000302101 ABCC1P33527 1531 aa31.83■■■□□ 2.69
NHLH1-201ENST00000302101 MAST1Q9Y2H9 1570 aa31.81■■■□□ 2.68
NHLH1-201ENST00000302101 FANCAO15360 1455 aa31.78■■■□□ 2.68
NHLH1-201ENST00000302101 TIMELESSQ9UNS1 1208 aa31.77■■■□□ 2.68
NHLH1-201ENST00000302101 SLC4A1APQ9BWU0 796 aaKnown RBP31.76■■■□□ 2.68
NHLH1-201ENST00000302101 TRAPPC8Q9Y2L5 1435 aa31.75■■■□□ 2.67
NHLH1-201ENST00000302101 FOXD1Q16676 465 aa31.74■■■□□ 2.67
NHLH1-201ENST00000302101 PZPP20742 1482 aa31.72■■■□□ 2.67
NHLH1-201ENST00000302101 PLXNC1O60486 1568 aa31.69■■■□□ 2.66
NHLH1-201ENST00000302101 TONSLQ96HA7 1378 aa31.68■■■□□ 2.66
NHLH1-201ENST00000302101 AFAP1Q8N556 730 aa31.68■■■□□ 2.66
NHLH1-201ENST00000302101 CD109Q6YHK3 1445 aa31.66■■■□□ 2.66
NHLH1-201ENST00000302101 NUP155O75694 1391 aa31.65■■■□□ 2.66
NHLH1-201ENST00000302101 ADGRL1O94910 1474 aa31.65■■■□□ 2.66
NHLH1-201ENST00000302101 SPAG9O60271 1321 aaKnown RBP31.62■■■□□ 2.65
NHLH1-201ENST00000302101 ANKRD30BQ9BXX2 1392 aa31.62■■■□□ 2.65
NHLH1-201ENST00000302101 SCAPERQ9BY12 1400 aa31.62■■■□□ 2.65
NHLH1-201ENST00000302101 PPP1R15AO75807 674 aaPredicted RBP31.61■■■□□ 2.65
NHLH1-201ENST00000302101 DUOX2Q9NRD8 1548 aa31.59■■■□□ 2.65
NHLH1-201ENST00000302101 PKD2Q13563 968 aa31.58■■■□□ 2.65
NHLH1-201ENST00000302101 KDM5DQ9BY66 1539 aa31.57■■■□□ 2.64
NHLH1-201ENST00000302101 RTEL1-TNFRSF6BF6WH68 1400 aa31.57■■■□□ 2.64
NHLH1-201ENST00000302101 ZFYVE16Q7Z3T8 1539 aa31.55■■■□□ 2.64
NHLH1-201ENST00000302101 CFAP74Q9C0B2 1584 aa31.53■■■□□ 2.64
NHLH1-201ENST00000302101 ERBINQ96RT1 1412 aa31.51■■■□□ 2.64
NHLH1-201ENST00000302101 ATP7AQ04656 1500 aa31.5■■■□□ 2.63
NHLH1-201ENST00000302101 UNC13BO14795 1591 aa31.49■■■□□ 2.63
NHLH1-201ENST00000302101 INO80Q9ULG1 1556 aaPredicted RBP31.49■■■□□ 2.63
NHLH1-201ENST00000302101 RPRD2Q5VT52 1461 aaKnown RBP31.49■■■□□ 2.63
NHLH1-201ENST00000302101 MYT1LQ9UL68 1186 aa31.49■■■□□ 2.63
NHLH1-201ENST00000302101 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.48■■■□□ 2.63
NHLH1-201ENST00000302101 FAM135AQ9P2D6 1515 aa31.47■■■□□ 2.63
NHLH1-201ENST00000302101 ZNF518AQ6AHZ1 1483 aa31.44■■■□□ 2.62
NHLH1-201ENST00000302101 MAP3K4Q9Y6R4 1608 aa31.44■■■□□ 2.62
NHLH1-201ENST00000302101 GLI2P10070 1586 aa31.41■■■□□ 2.62
NHLH1-201ENST00000302101 L3MBTL2Q969R5 705 aa31.41■■■□□ 2.62
NHLH1-201ENST00000302101 NEO1Q92859 1461 aa31.4■■■□□ 2.62
NHLH1-201ENST00000302101 IQGAP3Q86VI3 1631 aa31.38■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms