RNA–Protein interactions for RNA: ENST00000301480.4

ZNF560-201, Transcript of zinc finger protein 560, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF560, Length 2,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560-201ENST00000301480 DISP1Q96F81 1524 aa6.93□□□□□ -1.3
ZNF560-201ENST00000301480 KDM6BO15054 1643 aa6.92□□□□□ -1.3
ZNF560-201ENST00000301480 ASXL2Q76L83 1435 aa6.92□□□□□ -1.3
ZNF560-201ENST00000301480 PHLDB1Q86UU1 1377 aa6.92□□□□□ -1.3
ZNF560-201ENST00000301480 UBTFP17480 764 aaKnown RBP6.92□□□□□ -1.3
ZNF560-201ENST00000301480 BRD2P25440 801 aaKnown RBP6.92□□□□□ -1.3
ZNF560-201ENST00000301480 EEA1Q15075 1411 aa6.91□□□□□ -1.3
ZNF560-201ENST00000301480 KIAA0556O60303 1618 aa6.91□□□□□ -1.3
ZNF560-201ENST00000301480 PRXQ9BXM0 1461 aa6.91□□□□□ -1.3
ZNF560-201ENST00000301480 ANP32EQ9BTT0 268 aa6.9□□□□□ -1.3
ZNF560-201ENST00000301480 EPRSP07814 1512 aaKnown RBP6.9□□□□□ -1.31
ZNF560-201ENST00000301480 MAGI3Q5TCQ9 1506 aa6.89□□□□□ -1.31
ZNF560-201ENST00000301480 MAP3K4Q9Y6R4 1608 aa6.88□□□□□ -1.31
ZNF560-201ENST00000301480 WDR7Q9Y4E6 1490 aa6.88□□□□□ -1.31
ZNF560-201ENST00000301480 PLSCR2Q9NRY7 297 aa6.88□□□□□ -1.31
ZNF560-201ENST00000301480 CCDC136Q96JN2 1154 aa6.87□□□□□ -1.31
ZNF560-201ENST00000301480 CTTNBP2Q8WZ74 1663 aa6.87□□□□□ -1.31
ZNF560-201ENST00000301480 ABCA8O94911 1581 aa6.87□□□□□ -1.31
ZNF560-201ENST00000301480 ZCCHC11Q5TAX3 1644 aaKnown RBP6.85□□□□□ -1.31
ZNF560-201ENST00000301480 CFAP43Q8NDM7 1665 aa6.85□□□□□ -1.31
ZNF560-201ENST00000301480 PPRC1Q5VV67 1664 aaKnown RBP6.85□□□□□ -1.31
ZNF560-201ENST00000301480 CDK11BP21127 795 aaKnown RBP6.84□□□□□ -1.31
ZNF560-201ENST00000301480 CDK11AQ9UQ88 783 aaPredicted RBP6.84□□□□□ -1.31
ZNF560-201ENST00000301480 ARAP3Q8WWN8 1544 aa6.83□□□□□ -1.32
ZNF560-201ENST00000301480 DSG3P32926 999 aa6.83□□□□□ -1.32
ZNF560-201ENST00000301480 CD109Q6YHK3 1445 aa6.83□□□□□ -1.32
ZNF560-201ENST00000301480 IGSF3O75054 1194 aa6.83□□□□□ -1.32
ZNF560-201ENST00000301480 KDM4FA0A1W2PPD8 638 aa6.82□□□□□ -1.32
ZNF560-201ENST00000301480 CAPN15O75808 1086 aa6.82□□□□□ -1.32
ZNF560-201ENST00000301480 NEO1Q92859 1461 aa6.81□□□□□ -1.32
ZNF560-201ENST00000301480 SAMD9Q5K651 1589 aa6.81□□□□□ -1.32
ZNF560-201ENST00000301480 A0A0U1RQG5 324 aaPredicted RBP6.81□□□□□ -1.32
ZNF560-201ENST00000301480 EFCAB5A4FU69 1503 aa6.8□□□□□ -1.32
ZNF560-201ENST00000301480 SALL2Q9Y467 1007 aaPredicted RBP6.8□□□□□ -1.32
ZNF560-201ENST00000301480 TSPOAP1O95153 1857 aa6.8□□□□□ -1.32
ZNF560-201ENST00000301480 PAXIP1Q6ZW49 1069 aaPredicted RBP6.79□□□□□ -1.32
ZNF560-201ENST00000301480 ABCA9Q8IUA7 1624 aa6.79□□□□□ -1.32
ZNF560-201ENST00000301480 ATP10BO94823 1461 aa6.79□□□□□ -1.32
ZNF560-201ENST00000301480 ADGRL1O94910 1474 aa6.79□□□□□ -1.32
ZNF560-201ENST00000301480 IRX6P78412 446 aaPredicted RBP6.78□□□□□ -1.32
ZNF560-201ENST00000301480 COL17A1Q9UMD9 1497 aaPredicted RBP6.78□□□□□ -1.32
ZNF560-201ENST00000301480 AAMPQ13685 434 aa6.77□□□□□ -1.33
ZNF560-201ENST00000301480 KIF21BO75037 1637 aa6.77□□□□□ -1.33
ZNF560-201ENST00000301480 RAPGEF6Q8TEU7 1601 aa6.77□□□□□ -1.33
ZNF560-201ENST00000301480 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.77□□□□□ -1.33
ZNF560-201ENST00000301480 CFAP44Q96MT7 982 aa6.77□□□□□ -1.33
ZNF560-201ENST00000301480 CFAP74Q9C0B2 1584 aa6.77□□□□□ -1.33
ZNF560-201ENST00000301480 ZEB1P37275 1124 aaPredicted RBP6.76□□□□□ -1.33
ZNF560-201ENST00000301480 MAGI2Q86UL8 1455 aa6.75□□□□□ -1.33
ZNF560-201ENST00000301480 PLEKHD1A6NEE1 506 aa6.74□□□□□ -1.33
ZNF560-201ENST00000301480 U3KPZ7 1027 aaPredicted RBP6.74□□□□□ -1.33
ZNF560-201ENST00000301480 FHOD3Q2V2M9 1422 aa6.74□□□□□ -1.33
ZNF560-201ENST00000301480 ILDR1Q86SU0 546 aaPredicted RBP6.73□□□□□ -1.33
ZNF560-201ENST00000301480 FMN1Q68DA7 1419 aa6.73□□□□□ -1.33
ZNF560-201ENST00000301480 NUP153P49790 1475 aaKnown RBP6.73□□□□□ -1.33
ZNF560-201ENST00000301480 RSPH4AQ5TD94 716 aa6.73□□□□□ -1.33
ZNF560-201ENST00000301480 KDM2AQ9Y2K7 1162 aa6.73□□□□□ -1.33
ZNF560-201ENST00000301480 KCNH8Q96L42 1107 aa6.73□□□□□ -1.33
ZNF560-201ENST00000301480 POGZQ7Z3K3 1410 aa6.72□□□□□ -1.33
ZNF560-201ENST00000301480 ZMYM4Q5VZL5 1548 aa6.72□□□□□ -1.33
ZNF560-201ENST00000301480 DENND4BO75064 1496 aaPredicted RBP6.72□□□□□ -1.33
ZNF560-201ENST00000301480 HSP90B1P14625 803 aaKnown RBP6.71□□□□□ -1.34
ZNF560-201ENST00000301480 RSPH6AQ9H0K4 717 aa6.71□□□□□ -1.34
ZNF560-201ENST00000301480 SPINK5Q9NQ38 1064 aaPredicted RBP6.7□□□□□ -1.34
ZNF560-201ENST00000301480 AKNAQ7Z591 1439 aa6.7□□□□□ -1.34
ZNF560-201ENST00000301480 ADAMTSL3P82987 1691 aa6.7□□□□□ -1.34
ZNF560-201ENST00000301480 ARHGEF40Q8TER5 1519 aa6.69□□□□□ -1.34
ZNF560-201ENST00000301480 RBM10P98175 930 aaKnown RBP6.69□□□□□ -1.34
ZNF560-201ENST00000301480 POLR3GLQ9BT43 218 aa6.69□□□□□ -1.34
ZNF560-201ENST00000301480 PLCH2O75038 1416 aa6.69□□□□□ -1.34
ZNF560-201ENST00000301480 FANCAO15360 1455 aa6.69□□□□□ -1.34
ZNF560-201ENST00000301480 HECW1Q76N89 1606 aa6.68□□□□□ -1.34
ZNF560-201ENST00000301480 RBM42Q9BTD8 480 aaKnown RBP6.68□□□□□ -1.34
ZNF560-201ENST00000301480 HECW2Q9P2P5 1572 aa6.68□□□□□ -1.34
ZNF560-201ENST00000301480 NAP1L5Q96NT1 182 aaPredicted RBP6.68□□□□□ -1.34
ZNF560-201ENST00000301480 CLIP1P30622 1438 aa6.67□□□□□ -1.34
ZNF560-201ENST00000301480 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.67□□□□□ -1.34
ZNF560-201ENST00000301480 NPM3O75607 178 aaKnown RBP6.67□□□□□ -1.34
ZNF560-201ENST00000301480 HNRNPUL2Q1KMD3 747 aaKnown RBP6.67□□□□□ -1.34
ZNF560-201ENST00000301480 ZNF219Q9P2Y4 722 aaPredicted RBP6.67□□□□□ -1.34
ZNF560-201ENST00000301480 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.67□□□□□ -1.34
ZNF560-201ENST00000301480 PTPRMP28827 1452 aa6.67□□□□□ -1.34
ZNF560-201ENST00000301480 EFCAB2Q5VUJ9 269 aa6.67□□□□□ -1.34
ZNF560-201ENST00000301480 PPARGC1BQ86YN6 1023 aaKnown RBP6.67□□□□□ -1.34
ZNF560-201ENST00000301480 SLC4A1APQ9BWU0 796 aaKnown RBP6.67□□□□□ -1.34
ZNF560-201ENST00000301480 FRMPD1Q5SYB0 1578 aa6.67□□□□□ -1.34
ZNF560-201ENST00000301480 CCDC18Q5T9S5 1454 aa6.67□□□□□ -1.34
ZNF560-201ENST00000301480 BCORL1Q5H9F3 1711 aa6.67□□□□□ -1.34
ZNF560-201ENST00000301480 P3H3Q8IVL6 736 aa6.66□□□□□ -1.34
ZNF560-201ENST00000301480 BCCIPQ9P287 314 aaKnown RBP eCLIP6.66□□□□□ -1.34
ZNF560-201ENST00000301480 TROQ12816 1431 aaPredicted RBP6.66□□□□□ -1.34
ZNF560-201ENST00000301480 REREQ9P2R6 1566 aa6.66□□□□□ -1.34
ZNF560-201ENST00000301480 ZFYVE16Q7Z3T8 1539 aa6.65□□□□□ -1.34
ZNF560-201ENST00000301480 RICTORQ6R327 1708 aa6.65□□□□□ -1.34
ZNF560-201ENST00000301480 ATP10AO60312 1499 aa6.64□□□□□ -1.35
ZNF560-201ENST00000301480 C9orf84Q5VXU9 1444 aa6.64□□□□□ -1.35
ZNF560-201ENST00000301480 DEKP35659 375 aaKnown RBP6.64□□□□□ -1.35
ZNF560-201ENST00000301480 KIF14Q15058 1648 aa6.64□□□□□ -1.35
ZNF560-201ENST00000301480 ZNF518AQ6AHZ1 1483 aa6.64□□□□□ -1.35
ZNF560-201ENST00000301480 CASKIN1Q8WXD9 1431 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms