RNA–Protein interactions for RNA: ENST00000299687.9

ZNF407-201, Transcript of zinc finger protein 407, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF407, Length 7,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF407-201ENST00000299687 CCDC9Q9Y3X0 531 aaKnown RBP15.46■□□□□ 0.07
ZNF407-201ENST00000299687 CREBRFQ8IUR6 639 aa15.46■□□□□ 0.07
ZNF407-201ENST00000299687 GORABQ5T7V8 394 aa15.45■□□□□ 0.06
ZNF407-201ENST00000299687 GPATCH3Q96I76 525 aa15.45■□□□□ 0.06
ZNF407-201ENST00000299687 SOX12O15370 315 aa15.45■□□□□ 0.06
ZNF407-201ENST00000299687 TAF7LQ5H9L4 462 aa15.44■□□□□ 0.06
ZNF407-201ENST00000299687 ZNF330Q9Y3S2 320 aaPredicted RBP15.44■□□□□ 0.06
ZNF407-201ENST00000299687 PTMSP20962 102 aa15.44■□□□□ 0.06
ZNF407-201ENST00000299687 CSB-PGBD3P0DP91 1061 aa15.44■□□□□ 0.06
ZNF407-201ENST00000299687 RASSF8Q8NHQ8 419 aa15.44■□□□□ 0.06
ZNF407-201ENST00000299687 CFDP1Q9UEE9 299 aaPredicted RBP15.44■□□□□ 0.06
ZNF407-201ENST00000299687 SRPK2P78362 688 aaKnown RBP15.43■□□□□ 0.06
ZNF407-201ENST00000299687 SYAP1Q96A49 352 aaPredicted RBP15.42■□□□□ 0.06
ZNF407-201ENST00000299687 VPS53Q5VIR6 699 aa15.42■□□□□ 0.06
ZNF407-201ENST00000299687 CNKSR2Q8WXI2 1034 aa15.41■□□□□ 0.06
ZNF407-201ENST00000299687 HSP90B1P14625 803 aaKnown RBP15.41■□□□□ 0.06
ZNF407-201ENST00000299687 PAK3O75914 559 aaPredicted RBP15.4■□□□□ 0.06
ZNF407-201ENST00000299687 MIER1Q8N108 512 aa15.4■□□□□ 0.06
ZNF407-201ENST00000299687 ERCC6Q03468 1493 aa15.4■□□□□ 0.06
ZNF407-201ENST00000299687 CALD1Q05682 793 aaKnown RBP15.4■□□□□ 0.06
ZNF407-201ENST00000299687 TPM3P06753 285 aa15.39■□□□□ 0.05
ZNF407-201ENST00000299687 GBP4Q96PP9 640 aa15.39■□□□□ 0.05
ZNF407-201ENST00000299687 HDAC5Q9UQL6 1122 aa15.39■□□□□ 0.05
ZNF407-201ENST00000299687 MARCH6O60337 910 aa15.38■□□□□ 0.05
ZNF407-201ENST00000299687 CHMP3Q9Y3E7 222 aa15.38■□□□□ 0.05
ZNF407-201ENST00000299687 WWC1Q8IX03 1113 aa15.37■□□□□ 0.05
ZNF407-201ENST00000299687 TCEAL9Q9UHQ7 104 aa15.37■□□□□ 0.05
ZNF407-201ENST00000299687 PATL2C9JE40 543 aaKnown RBP15.37■□□□□ 0.05
ZNF407-201ENST00000299687 IPO8O15397 1037 aaKnown RBP15.37■□□□□ 0.05
ZNF407-201ENST00000299687 MLECQ14165 292 aa15.36■□□□□ 0.05
ZNF407-201ENST00000299687 CC2D1BQ5T0F9 858 aaKnown RBP15.36■□□□□ 0.05
ZNF407-201ENST00000299687 TMF1P82094 1093 aa15.36■□□□□ 0.05
ZNF407-201ENST00000299687 APBB1O00213 710 aa15.35■□□□□ 0.05
ZNF407-201ENST00000299687 FRAT2O75474 233 aaPredicted RBP15.35■□□□□ 0.05
ZNF407-201ENST00000299687 CSPP1Q1MSJ5 1256 aa15.35■□□□□ 0.05
ZNF407-201ENST00000299687 PPP4R2Q9NY27 417 aa15.35■□□□□ 0.05
ZNF407-201ENST00000299687 PES1O00541 588 aaKnown RBP15.34■□□□□ 0.05
ZNF407-201ENST00000299687 HDGFL2Q7Z4V5 671 aaPredicted RBP15.34■□□□□ 0.05
ZNF407-201ENST00000299687 SPAG9O60271 1321 aaKnown RBP15.33■□□□□ 0.05
ZNF407-201ENST00000299687 TSR1Q2NL82 804 aaKnown RBP15.33■□□□□ 0.05
ZNF407-201ENST00000299687 GZF1Q9H116 711 aaPredicted RBP15.33■□□□□ 0.05
ZNF407-201ENST00000299687 GTF2E1P29083 439 aaPredicted RBP15.33■□□□□ 0.04
ZNF407-201ENST00000299687 RRP12Q5JTH9 1297 aaKnown RBP15.33■□□□□ 0.04
ZNF407-201ENST00000299687 MORC1Q86VD1 984 aa15.32■□□□□ 0.04
ZNF407-201ENST00000299687 ZCCHC6Q5VYS8 1495 aaKnown RBP15.31■□□□□ 0.04
ZNF407-201ENST00000299687 CTDP1Q9Y5B0 961 aaPredicted RBP15.31■□□□□ 0.04
ZNF407-201ENST00000299687 DCAF8L1A6NGE4 600 aa15.31■□□□□ 0.04
ZNF407-201ENST00000299687 TPD52L1Q16890 204 aaPredicted RBP15.3■□□□□ 0.04
ZNF407-201ENST00000299687 TRIM34Q9BYJ4 488 aa15.29■□□□□ 0.04
ZNF407-201ENST00000299687 TPM2P07951 284 aa15.28■□□□□ 0.04
ZNF407-201ENST00000299687 CLIP1P30622 1438 aa15.28■□□□□ 0.04
ZNF407-201ENST00000299687 CCDC70Q6NSX1 233 aa15.28■□□□□ 0.04
ZNF407-201ENST00000299687 KIF3AQ9Y496 699 aa15.27■□□□□ 0.04
ZNF407-201ENST00000299687 DEKP35659 375 aaKnown RBP15.27■□□□□ 0.03
ZNF407-201ENST00000299687 STK31Q9BXU1 1019 aa15.26■□□□□ 0.03
ZNF407-201ENST00000299687 CWC22Q9HCG8 908 aaKnown RBP15.26■□□□□ 0.03
ZNF407-201ENST00000299687 B4GALNT3Q6L9W6 998 aa15.26■□□□□ 0.03
ZNF407-201ENST00000299687 PHF14O94880 888 aa15.26■□□□□ 0.03
ZNF407-201ENST00000299687 AMOTL1Q8IY63 956 aa15.25■□□□□ 0.03
ZNF407-201ENST00000299687 CCAR2Q8N163 923 aaKnown RBP15.25■□□□□ 0.03
ZNF407-201ENST00000299687 TRIM6-TRIM34B2RNG4 842 aa15.24■□□□□ 0.03
ZNF407-201ENST00000299687 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.24■□□□□ 0.03
ZNF407-201ENST00000299687 SF3A1Q15459 793 aaKnown RBP15.24■□□□□ 0.03
ZNF407-201ENST00000299687 NOL10Q9BSC4 688 aaKnown RBP15.23■□□□□ 0.03
ZNF407-201ENST00000299687 SAFB2Q14151 953 aaKnown RBP eCLIP15.23■□□□□ 0.03
ZNF407-201ENST00000299687 GPS2Q13227 327 aa15.23■□□□□ 0.03
ZNF407-201ENST00000299687 TOMM22Q9NS69 142 aa15.23■□□□□ 0.03
ZNF407-201ENST00000299687 TPM1P09493 284 aa15.21■□□□□ 0.03
ZNF407-201ENST00000299687 HMMRO75330 724 aa15.21■□□□□ 0.03
ZNF407-201ENST00000299687 AKAP17AQ02040 695 aaKnown RBP15.21■□□□□ 0.03
ZNF407-201ENST00000299687 CHMP4CQ96CF2 233 aa15.21■□□□□ 0.03
ZNF407-201ENST00000299687 STK26Q9P289 416 aa15.21■□□□□ 0.03
ZNF407-201ENST00000299687 EID1Q9Y6B2 187 aa15.19■□□□□ 0.02
ZNF407-201ENST00000299687 MSH5O43196 834 aa15.19■□□□□ 0.02
ZNF407-201ENST00000299687 DCAF1Q9Y4B6 1507 aa15.19■□□□□ 0.02
ZNF407-201ENST00000299687 DCAF11Q8TEB1 546 aa15.18■□□□□ 0.02
ZNF407-201ENST00000299687 SLKQ9H2G2 1235 aaPredicted RBP15.18■□□□□ 0.02
ZNF407-201ENST00000299687 ITPRIPQ8IWB1 547 aa15.18■□□□□ 0.02
ZNF407-201ENST00000299687 KIF16BQ96L93 1317 aa15.17■□□□□ 0.02
ZNF407-201ENST00000299687 CCNB3Q8WWL7 1395 aa15.17■□□□□ 0.02
ZNF407-201ENST00000299687 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.17■□□□□ 0.02
ZNF407-201ENST00000299687 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.17■□□□□ 0.02
ZNF407-201ENST00000299687 GOLGA6L3A6NEY3 463 aa15.17■□□□□ 0.02
ZNF407-201ENST00000299687 GOLGA6L19H0YKK7 550 aa15.16■□□□□ 0.02
ZNF407-201ENST00000299687 LRRFIP1Q32MZ4 808 aaKnown RBP15.16■□□□□ 0.02
ZNF407-201ENST00000299687 RWDD1Q9H446 243 aaPredicted RBP15.16■□□□□ 0.02
ZNF407-201ENST00000299687 H3BQV1 296 aa15.15■□□□□ 0.02
ZNF407-201ENST00000299687 IFFO2Q5TF58 517 aa15.15■□□□□ 0.02
ZNF407-201ENST00000299687 CCDC43Q96MW1 224 aaKnown RBP15.14■□□□□ 0.01
ZNF407-201ENST00000299687 MEX3CQ5U5Q3 659 aaKnown RBP15.14■□□□□ 0.01
ZNF407-201ENST00000299687 EVA1CP58658 441 aa15.14■□□□□ 0.01
ZNF407-201ENST00000299687 GOLGA3Q08378 1498 aa15.13■□□□□ 0.01
ZNF407-201ENST00000299687 PCMTD1Q96MG8 357 aaPredicted RBP15.13■□□□□ 0.01
ZNF407-201ENST00000299687 SYNE3Q6ZMZ3 975 aa15.13■□□□□ 0.01
ZNF407-201ENST00000299687 EIF3AQ14152 1382 aaKnown RBP15.13■□□□□ 0.01
ZNF407-201ENST00000299687 RAD21O60216 631 aa15.13■□□□□ 0.01
ZNF407-201ENST00000299687 IPO7O95373 1038 aaKnown RBP15.12■□□□□ 0.01
ZNF407-201ENST00000299687 EIF4G1Q04637 1599 aaKnown RBP15.12■□□□□ 0.01
ZNF407-201ENST00000299687 GGT6Q6P531 493 aa15.12■□□□□ 0.01
ZNF407-201ENST00000299687 NOL8Q76FK4 1167 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms