RNA–Protein interactions for RNA: ENST00000299608.6

TMX3-201, Transcript of thioredoxin related transmembrane protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TMX3, Length 4,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX3-201ENST00000299608 NUTM2FA1L443 756 aa13.88□□□□□ -0.19
TMX3-201ENST00000299608 HDGFL2Q7Z4V5 671 aaPredicted RBP13.88□□□□□ -0.19
TMX3-201ENST00000299608 TIMELESSQ9UNS1 1208 aa13.87□□□□□ -0.19
TMX3-201ENST00000299608 PTPRGP23470 1445 aa13.87□□□□□ -0.19
TMX3-201ENST00000299608 RAB3GAP2Q9H2M9 1393 aa13.87□□□□□ -0.19
TMX3-201ENST00000299608 NBR1Q14596 966 aa13.86□□□□□ -0.19
TMX3-201ENST00000299608 EID1Q9Y6B2 187 aa13.86□□□□□ -0.19
TMX3-201ENST00000299608 CSB-PGBD3P0DP91 1061 aa13.86□□□□□ -0.19
TMX3-201ENST00000299608 PNNQ9H307 717 aaKnown RBP13.85□□□□□ -0.19
TMX3-201ENST00000299608 RSPH4AQ5TD94 716 aa13.84□□□□□ -0.19
TMX3-201ENST00000299608 ROCK2O75116 1388 aaKnown RBP13.83□□□□□ -0.19
TMX3-201ENST00000299608 RGS3P49796 1198 aa13.83□□□□□ -0.2
TMX3-201ENST00000299608 OS9Q13438 667 aaPredicted RBP13.83□□□□□ -0.2
TMX3-201ENST00000299608 L3MBTL2Q969R5 705 aa13.82□□□□□ -0.2
TMX3-201ENST00000299608 RTF1Q92541 710 aaKnown RBP13.82□□□□□ -0.2
TMX3-201ENST00000299608 U2AF1L5P0DN76 240 aaPredicted RBP13.81□□□□□ -0.2
TMX3-201ENST00000299608 U2AF1Q01081 240 aaKnown RBP eCLIP13.81□□□□□ -0.2
TMX3-201ENST00000299608 RUSC2Q8N2Y8 1516 aa13.81□□□□□ -0.2
TMX3-201ENST00000299608 SMARCA4P51532 1647 aa13.8□□□□□ -0.2
TMX3-201ENST00000299608 CCDC9Q9Y3X0 531 aaKnown RBP13.8□□□□□ -0.2
TMX3-201ENST00000299608 CCDC18Q5T9S5 1454 aa13.8□□□□□ -0.2
TMX3-201ENST00000299608 NGDNQ8NEJ9 315 aaKnown RBP13.8□□□□□ -0.2
TMX3-201ENST00000299608 TAOK2Q9UL54 1235 aa13.8□□□□□ -0.2
TMX3-201ENST00000299608 ZNF330Q9Y3S2 320 aaPredicted RBP13.8□□□□□ -0.2
TMX3-201ENST00000299608 TRAK1Q9UPV9 953 aa13.79□□□□□ -0.2
TMX3-201ENST00000299608 FAM69CQ0P6D2 419 aa13.77□□□□□ -0.21
TMX3-201ENST00000299608 TPRNQ4KMQ1 711 aa13.76□□□□□ -0.21
TMX3-201ENST00000299608 CASC1Q6TDU7 716 aa13.76□□□□□ -0.21
TMX3-201ENST00000299608 RAD54L2Q9Y4B4 1467 aa13.75□□□□□ -0.21
TMX3-201ENST00000299608 GOLGA2Q08379 1002 aa13.75□□□□□ -0.21
TMX3-201ENST00000299608 BECN1Q14457 450 aa13.75□□□□□ -0.21
TMX3-201ENST00000299608 KTN1Q86UP2 1357 aaKnown RBP13.75□□□□□ -0.21
TMX3-201ENST00000299608 MS4A1P11836 297 aa13.74□□□□□ -0.21
TMX3-201ENST00000299608 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.74□□□□□ -0.21
TMX3-201ENST00000299608 LTV1Q96GA3 475 aaPredicted RBP13.74□□□□□ -0.21
TMX3-201ENST00000299608 TERF2IPQ9NYB0 399 aa13.74□□□□□ -0.21
TMX3-201ENST00000299608 CHMP4BQ9H444 224 aaKnown RBP13.73□□□□□ -0.21
TMX3-201ENST00000299608 GAPVD1Q14C86 1478 aa13.72□□□□□ -0.21
TMX3-201ENST00000299608 IGF1RP08069 1367 aa13.72□□□□□ -0.21
TMX3-201ENST00000299608 AQRO60306 1485 aaKnown RBP eCLIP13.72□□□□□ -0.214e-8■■■■□ 24.7
TMX3-201ENST00000299608 B4GALNT3Q6L9W6 998 aa13.72□□□□□ -0.21
TMX3-201ENST00000299608 FGD5Q6ZNL6 1462 aa13.72□□□□□ -0.21
TMX3-201ENST00000299608 KCNJ4P48050 445 aa13.71□□□□□ -0.21
TMX3-201ENST00000299608 APBB1O00213 710 aa13.71□□□□□ -0.21
TMX3-201ENST00000299608 FGD1P98174 961 aa13.71□□□□□ -0.22
TMX3-201ENST00000299608 NCLP19338 710 aaKnown RBP13.7□□□□□ -0.22
TMX3-201ENST00000299608 AMPHP49418 695 aa13.69□□□□□ -0.22
TMX3-201ENST00000299608 PPP4R2Q9NY27 417 aa13.69□□□□□ -0.22
TMX3-201ENST00000299608 TULP1O00294 542 aaPredicted RBP13.69□□□□□ -0.22
TMX3-201ENST00000299608 EIF3AQ14152 1382 aaKnown RBP13.68□□□□□ -0.22
TMX3-201ENST00000299608 NAP1L2Q9ULW6 460 aaPredicted RBP13.68□□□□□ -0.22
TMX3-201ENST00000299608 ST20-MTHFSA0A0A6YYL1 179 aa13.67□□□□□ -0.22
TMX3-201ENST00000299608 DDRGK1Q96HY6 314 aa13.67□□□□□ -0.22
TMX3-201ENST00000299608 ZNF644Q9H582 1327 aaPredicted RBP13.67□□□□□ -0.22
TMX3-201ENST00000299608 VGFO15240 615 aaPredicted RBP13.66□□□□□ -0.22
TMX3-201ENST00000299608 CCDC144AA2RUR9 1427 aa13.66□□□□□ -0.22
TMX3-201ENST00000299608 CCER2I3L3R5 266 aa13.65□□□□□ -0.22
TMX3-201ENST00000299608 RALBP1Q15311 655 aa13.65□□□□□ -0.22
TMX3-201ENST00000299608 GOLGA6L22H0YM25 854 aa13.65□□□□□ -0.22
TMX3-201ENST00000299608 CDK11BP21127 795 aaKnown RBP13.65□□□□□ -0.22
TMX3-201ENST00000299608 MINK1Q8N4C8 1332 aaPredicted RBP13.64□□□□□ -0.23
TMX3-201ENST00000299608 CCDC146Q8IYE0 955 aa13.64□□□□□ -0.23
TMX3-201ENST00000299608 NCAPD3P42695 1498 aa13.64□□□□□ -0.23
TMX3-201ENST00000299608 EIF5BO60841 1220 aaKnown RBP13.63□□□□□ -0.23
TMX3-201ENST00000299608 IPO8O15397 1037 aaKnown RBP13.63□□□□□ -0.23
TMX3-201ENST00000299608 CALD1Q05682 793 aaKnown RBP13.62□□□□□ -0.23
TMX3-201ENST00000299608 ZRSR1Q15695 479 aaKnown RBP13.62□□□□□ -0.23
TMX3-201ENST00000299608 STK31Q9BXU1 1019 aa13.61□□□□□ -0.23
TMX3-201ENST00000299608 AFAP1Q8N556 730 aa13.6□□□□□ -0.23
TMX3-201ENST00000299608 ITPRIPQ8IWB1 547 aa13.59□□□□□ -0.23
TMX3-201ENST00000299608 PANK3Q9H999 370 aa13.59□□□□□ -0.23
TMX3-201ENST00000299608 ISY1Q9ULR0 285 aaKnown RBP13.59□□□□□ -0.23
TMX3-201ENST00000299608 CLUAP1Q96AJ1 413 aa13.59□□□□□ -0.23
TMX3-201ENST00000299608 NLRP13Q86W25 1043 aa13.58□□□□□ -0.23
TMX3-201ENST00000299608 CHMP3Q9Y3E7 222 aa13.58□□□□□ -0.24
TMX3-201ENST00000299608 AEBP2Q6ZN18 517 aaPredicted RBP13.58□□□□□ -0.24
TMX3-201ENST00000299608 RCAN3Q9UKA8 241 aa13.58□□□□□ -0.24
TMX3-201ENST00000299608 RRP7AQ9Y3A4 280 aaKnown RBP13.58□□□□□ -0.24
TMX3-201ENST00000299608 NESP48681 1621 aa13.57□□□□□ -0.24
TMX3-201ENST00000299608 SLC4A10Q6U841 1118 aa13.57□□□□□ -0.24
TMX3-201ENST00000299608 SMC4Q9NTJ3 1288 aa13.57□□□□□ -0.24
TMX3-201ENST00000299608 HSP90AB1P08238 724 aaKnown RBP13.56□□□□□ -0.24
TMX3-201ENST00000299608 ELL2O00472 640 aaPredicted RBP13.55□□□□□ -0.24
TMX3-201ENST00000299608 COG3Q96JB2 828 aa13.55□□□□□ -0.24
TMX3-201ENST00000299608 EVC2Q86UK5 1308 aa13.55□□□□□ -0.24
TMX3-201ENST00000299608 EVA1CP58658 441 aa13.54□□□□□ -0.24
TMX3-201ENST00000299608 GTF2E1P29083 439 aaPredicted RBP13.53□□□□□ -0.24
TMX3-201ENST00000299608 KIF15Q9NS87 1388 aa13.53□□□□□ -0.24
TMX3-201ENST00000299608 CHMP4AQ9BY43 222 aa13.53□□□□□ -0.24
TMX3-201ENST00000299608 TAF7LQ5H9L4 462 aa13.53□□□□□ -0.24
TMX3-201ENST00000299608 GORABQ5T7V8 394 aa13.52□□□□□ -0.24
TMX3-201ENST00000299608 UACAQ9BZF9 1416 aa13.52□□□□□ -0.24
TMX3-201ENST00000299608 PSME1Q06323 249 aa13.52□□□□□ -0.25
TMX3-201ENST00000299608 MYOM3Q5VTT5 1437 aa13.52□□□□□ -0.25
TMX3-201ENST00000299608 DHX57Q6P158 1386 aaKnown RBP13.51□□□□□ -0.25
TMX3-201ENST00000299608 PLCB2Q00722 1185 aa13.51□□□□□ -0.25
TMX3-201ENST00000299608 TMX4Q9H1E5 349 aaPredicted RBP13.5□□□□□ -0.25
TMX3-201ENST00000299608 SPRYD3Q8NCJ5 442 aa13.5□□□□□ -0.25
TMX3-201ENST00000299608 GRIN2BQ13224 1484 aa13.5□□□□□ -0.25
TMX3-201ENST00000299608 LMOD3Q0VAK6 560 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms